Basic Information

Insect: Andrena camellia
Gene Symbol: -
Assembly: GCA_029448645.1
Location: CM055678.1:20182848-20191576[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.9e-05 0.0056 17.5 1.4 1 23 452 474 452 474 0.96

2 18 0.0035 0.34 11.9 1.6 1 20 480 499 480 502 0.94

3 18 1.5e-05 0.0014 19.4 1.4 1 23 508 530 508 530 0.98

4 18 8.5e-05 0.0081 17.0 4.4 1 21 536 556 536 558 0.95

5 18 1.1e-05 0.0011 19.8 5.6 1 23 564 586 564 586 0.99

6 18 2.6e-05 0.0025 18.6 5.3 1 23 592 614 592 614 0.97

7 18 9.9e-05 0.0095 16.8 6.9 1 23 620 642 620 642 0.96

8 18 9.7e-08 9.3e-06 26.3 2.7 1 23 648 670 648 670 0.98

9 18 7.2e-05 0.0069 17.3 6.7 1 23 676 698 676 698 0.97

10 18 2.2e-05 0.0021 18.9 5.8 1 23 704 726 704 726 0.98

11 18 5.9e-07 5.7e-05 23.8 2.9 1 23 732 754 732 754 0.98

12 18 8.8e-06 0.00084 20.1 7.8 1 23 760 782 760 782 0.98

13 18 2.8e-05 0.0027 18.5 9.1 1 23 788 810 788 810 0.98

14 18 3.6e-05 0.0035 18.2 7.5 1 23 816 838 816 838 0.98

15 18 0.0017 0.17 12.9 8.8 1 21 844 864 844 866 0.94

16 18 1.3e-05 0.0013 19.6 0.4 1 23 872 894 872 894 0.98

17 18 0.032 3 8.9 4.5 1 23 904 926 904 926 0.98

18 18 5.2e-07 4.9e-05 24.0 1.3 1 23 932 954 932 954 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.9e-05	0.0056	17.5	1.4	1	23	452	474	452	474	0.96
2	18	0.0035	0.34	11.9	1.6	1	20	480	499	480	502	0.94
3	18	1.5e-05	0.0014	19.4	1.4	1	23	508	530	508	530	0.98
4	18	8.5e-05	0.0081	17.0	4.4	1	21	536	556	536	558	0.95
5	18	1.1e-05	0.0011	19.8	5.6	1	23	564	586	564	586	0.99
6	18	2.6e-05	0.0025	18.6	5.3	1	23	592	614	592	614	0.97
7	18	9.9e-05	0.0095	16.8	6.9	1	23	620	642	620	642	0.96
8	18	9.7e-08	9.3e-06	26.3	2.7	1	23	648	670	648	670	0.98
9	18	7.2e-05	0.0069	17.3	6.7	1	23	676	698	676	698	0.97
10	18	2.2e-05	0.0021	18.9	5.8	1	23	704	726	704	726	0.98
11	18	5.9e-07	5.7e-05	23.8	2.9	1	23	732	754	732	754	0.98
12	18	8.8e-06	0.00084	20.1	7.8	1	23	760	782	760	782	0.98
13	18	2.8e-05	0.0027	18.5	9.1	1	23	788	810	788	810	0.98
14	18	3.6e-05	0.0035	18.2	7.5	1	23	816	838	816	838	0.98
15	18	0.0017	0.17	12.9	8.8	1	21	844	864	844	866	0.94
16	18	1.3e-05	0.0013	19.6	0.4	1	23	872	894	872	894	0.98
17	18	0.032	3	8.9	4.5	1	23	904	926	904	926	0.98
18	18	5.2e-07	4.9e-05	24.0	1.3	1	23	932	954	932	954	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCATTGCCAGCGACTACGCAGGCACAAGAGGATGTAAACGCGGGTCAAAGTGGTCGTCCTTCGTACCCAGGTGGTTTGACTACTGCAACCAGTCTTGGCAATGTAGCGAGTACCCCGCATTCATCCGCGGACCTGCGTGTAGGTACAGCCGTAGCGTTAGCCTCCTCGGTAGCTAAATATTGGGTCCTCACCAATCTGTTTCCTGGACCGCTACCTCAGGTCTCGGTCTATCACCATTCCCACCACAACTCCTCGCACAGGAGTAGTGGAGGTGGAGAGGCATCTTCCAAAGAGCCAGCCTCTTCATTGAATCAAGAAATGGCGTTGACTTCCAGTTCGCATCATCAGTCGACGCctactcatcatcatcatcagccTTCAGTTAGCAGTAGCAGCCATCATAGCTCTTTACAACCAAATCCGCAGCAGATCCCAGTGTCGCTGCCAGGCCTTAATCTAGACGGAGCGCATATACCCGCAAGCGTTAGTCATTTGCAGGCTGCACATGCACAAATGCAGCAACAAATGCAGGCGCAACAGCAACAGCTGcatcagcagcagcagcagccgcagcagcagccccaacagcagcagcagcaacaatcTCACCATCAGATGCAAAATCATCAAAATGCTCAGAACAATGGACCAACTGCACATAATCAAAACGCACAGAGAGATGATAATAAAGTGAAAGATGAGGGTGGAAGTTGCACAACTGAACGTTGTAGCGACAATCAAGTTCATTGCCAAGTCCAGTGTGATCTCCAGCTACAAACATCTCAAGATCTGCAACAAAGTCTtatgcaacagcagcagcaacaacaacaacagcagcagcagcaacaacaaatTGGTGTGAATATAAGTGGAAATTCTTCGGCCGAAGGTGGAAGTCAGAACAATTCAGAGAAGcctgaaaaagaaaaagagctGCGTCAACTGAACATGACGCAGTTCCAAGTGCCAGATTTAAAACCAGGAGGTCATATGATGGATGTGAGAACAGCCGACGGTTCAGTTGTAAAAATCAGTGCTGGGAATGAACAAGATTTAGCGAAAACTCTTGGGGTTGAAATGGTGCAAAATATGTataagGTGAATGTCGAAGATATTAATCAGCTTCTAGCATATCATGAAGTATTTGGGAAACTACAAAGTGACATAGCTGCTGGTACAAGCTTAGTTGGAAGCACAGTTCCTACTCAAACAGTTACCACGATACAGAATGGAACGCCGATTGTACAGCAAGTTCAATTAAATAAGTTCGATATTAAGTCGAGTGACGGTGAAGCTACACCAGGACCAAGCGCATCGCCAGTATCGGTTGGAAGCCATGCTTGTGAAATATGTGGAAAGATTTTTCAGTTTCGCTATCAGCTTATCGTGCACCGTCGGTATCATACGGAAAGAAAACCATTTACATGTCAAGTGTGTGGCAAGGCATTTTTAAATGCGAACGATTTGACTCGCCATGGTAAATGTCACTTAGGTGGATCCATGTTTACTTGTACAGTGTGTTTTCATGTGTTTGCTAATGCACCGTCGTTAGAGCGCCATATGAAGCGACATGCTACCGATAAACCTTACAATTGTACCGTATGCGGAAAGAGTTTCGCGAGAAAGGAACATTTGGATAATCATACTCGCTGCCATACTGGGGAAACGCCCTACAGGTGCCAGTACTGTTCGAAAACATTTACTAGGAAAGAACATATGGTGAATCATGTTCGCAAACACACGGGTGAAACGCCCCATCGATGTGATATTTGCAAAAAGAGCTTTACTCGCAAAGAACATTTTATGAATCATGTTATGTGGCACACAGGAGAGACTCCTCACCATTGTCAAGCATGCGGCAAGAAGTATACGCGTAAAGAACATCTTGCAAACCATATGCGTTCGCATACCAACGACACACCATTTCGCTGTGAAATATGCGGTAAGTCGTTTACGAGAAAGGAGCACTTCACGAACCACATAATGTGGCACACGGGTGAGACGCCGCACCGCTGTGATTTCTGCTCGAAGACATTCACGCGAAAGGAGCATCTTTTGAACCACGTCCGCCAGCACACGGGTGAGTCTCCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGGGAGACGCCCTTCCGCTGTCAGTACTGTCCAAAAGCATTTACGCGGAAGGATCACCTGGTAAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCCTTCACGAGGAAGGAACATTTGACAAATCACGTGCGTCAACATACAGGCGAATCGCCACACCGATGCCACTTCTGCTCCAAGTCATTTACTCGTAAGGAGCATTTGACGAATCATGTGCGAATCCACACCGGCGAATCACCGCACAGGTGTGAGTTTTGTCAGAGGACGTTCACTAGGAAAGAACACCTTAATAATCATCTCCGTCAACATACCGGAGATTCATCGCACTGTTGTAACGTGTGTTCGAAGCCGTTTACAAGAAAGGAGCATCTTGTAAATCATATGCGATGTCATACTGGTGAACGTCCATTCGTATGCACAGAATGTGGCAAGAGCTTCCCGTTGAAGGGCAATCTACTTTTCCATATGCGCTCGCACAATAAAGGAAGTAACGCCGAGAGGCCGTTCCGTTGCGACCTATGTCCTAAAGACTTCATGTGCAAAGGGCACTTGGTGTCCCACAGACGATCGCATTCGGACGAACGGCCCCACAGCTGCCCGGATTGCGGGAAAACGTTCGTCGAGAAAGGCAACATGCTGAGACATTTAAGGAAGCACGCGGCAGAAGGGCCACCGACACAAGTCACCACGCCATCGGCCATTCCTCAATCCGGCGTTCTGCCGATACCGGCTGCAGCGGTTCTGGTTGGTCATCCGTTGGCACCGCCAGCACCACCAGTAGTGCCACAACACACGGTTGTCGTGCCCACCCCGCCAGGTGTGTTGACCTCCTACTAA
Protein Sequence: MNSEQHALPATTQAQEDVNAGQSGRPSYPGGLTTATSLGNVASTPHSSADLRVGTAVALASSVAKYWVLTNLFPGPLPQVSVYHHSHHNSSHRSSGGGEASSKEPASSLNQEMALTSSSHHQSTPTHHHHQPSVSSSSHHSSLQPNPQQIPVSLPGLNLDGAHIPASVSHLQAAHAQMQQQMQAQQQQLHQQQQQPQQQPQQQQQQQSHHQMQNHQNAQNNGPTAHNQNAQRDDNKVKDEGGSCTTERCSDNQVHCQVQCDLQLQTSQDLQQSLMQQQQQQQQQQQQQQQIGVNISGNSSAEGGSQNNSEKPEKEKELRQLNMTQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSDIAAGTSLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKSSDGEATPGPSASPVSVGSHACEICGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFLNANDLTRHGKCHLGGSMFTCTVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQACGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVTTPSAIPQSGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00983718;
80% Identity: -