Anig011386.1
Basic Information
- Insect
- Anaulacaspis nigra
- Gene Symbol
- Hr39
- Assembly
- GCA_030264675.1
- Location
- JARJDV010009445.1:58646-61213[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3 1.6e+04 -8.3 12.9 48 163 109 224 95 253 0.41 2 5 0.23 1.2e+03 -1.6 4.6 46 123 197 280 180 317 0.57 3 5 2.9e-08 0.00016 21.1 0.0 1 25 388 412 388 434 0.83 4 5 0.0076 42 3.3 0.0 76 114 426 475 408 497 0.73 5 5 1.8e-73 1e-69 235.9 0.1 205 408 518 716 491 716 0.96
Sequence Information
- Coding Sequence
- ATGGCGGCGGATATGCGATCACCGAACGTTTCCGTAACGCCGATCAACATCGAGCCGCCGtacccgccgccgccggctaTCAGTGTCGAGCCAACGGCGGTATTGCCAAAACACAATGAGCCGCCATTTGATAGCTCCGACGCGGAGGTGGCCCAGATTGACTTTCAGTCCAGCGTCCACCTACGGCACAAGATCAAGCGTGATCCTGAATGCGGGGATGTCGTGGTACCACGTCCCATGTCCTGGGAGGGGGAGCTCTCCGACGGGGAGCGCGAGATGTGCATCGACGATGATCATGGACATGTACCTGAAAACTTATCAATGCAACATAATCATCAAGCCACTCCAGAACGTCAAACTACGATTATTGCCAACAACAATTCCAAGGAGAGTCCAGTGATGCGATTGAAACAAGCGCATACAAACTACTCGTTACATTCGACACCGAGTAATTCACCGCTTCTTTCGCAACGTCATACTATGCCTCCGGTGATGGTCGCAAAGGATCTGGTACATAAAGCACTTAATGTGCCCCCGACGCCCAGCCCCGATTCAGCAGTACATTCAGCGTATAGTGTGTTTTCATCACCCACGCAAAGTCCCTTGACGCAACGCCATGTCACGCTAACCCCAAATTTGAGCAGGAATAACAGCGATGCGTCGCATTCCAGTTGTTGTTCCTATTCGAGTGTATCGGTTTCAGTATCACCTACTCAACAGTTTTCTCCAACGCATAGCCCAATCCAGGGAAGACATATGCCAGGTATACATGGAAGTCCTCTGCACCATAATGTGCTTTATCGGAATCTCCAAGAAGATTCAAACACGCAATTCACCACTGCTTCGGATCATGATAATTTGGATGATTCGCAAGGGGATGATAAGACTGGTTTGGTTCATACGTCTCTTCCTGCGCAACCTGGAATTTCTCGTCAGCAGCTTATCAATAGCCCATGTCCAATTTGTGGTGATAAAATATCAGGATTCCATTATGGTATCTTCAGTTGTGAATCCTGCAAGGGATTCTTTAAGCGTACGGTGCAAAATCGCAAAAACTATCATTGTCTTCGTGGAGCAGTGTGTCCAGTAACAGTGGCAACACGAAAGAAGTGTCCGGCTTGTCGATTCGAAAAGTGCTTGCAATGTGGCATGAAGTTGGAAGCGATACGTGAGGATCGAACACGTGGTGGTCGATCAACGTATCAATGTTCGTATTCACTTCCGCCGTCTTTAGCAAACCATTCCGAGTTGCGAGCCAGTTCCAGTGATTTGCGCCATGGTAGTTTGGATGGTCAGCATATGGGTGGTTTCTCCGTTAAGCTTGAACCCTCGGAGTCTCAATCGCATGGTAAAAAGTTTAGCGCGCGTCATGGGGTTCCTCCATTATTGCAAgaaataatGGATGTGGAGCACTTGTGGCATTATACAGAATTAGAGCTGAACAAATTGAATACGGAAGGAAGCCTGGGCCGGGAAGGATCAAGTGGCGCCATTCACAATCTTTCAATACATCCGCTTTTGGCGGGAACTGCATTGGCTGGTTCAACCGATACAAATCCAGACTTTCTCGCCAATTTGTGCAATATTGCCGACCATCGTTTGtacaaaattgttaaatgGTGTAAGAGCTTgccattatttaaaaatatctcgATTGATGATCAAATATGTTTGCTAATCAACTCATGGTGCGAACTTCTTCTGTTCTCGTGTTGCTTTCGTTCTATGTCGACTCCTGGAGAGATTCGCGTCTCTTTGGGTAAGAGTATCACATTGGCACAAGCCAGGGACCAAGGGATGCAAGCATGCATTGAAAGGATGTTGAATTTCACGGAGCAATTGCGGCGATTGCGTGTTGATCGCTATGAATATGTTGCCATGAAAGTAATAGTATTACTTACTTCAgATACTTCTGAACTACGAGAGGCTGATAAAGTGCGCGCATCTCAAGAGAAAGCACTTAAAGCATTGCAAGACTATACGTTAACTCACTATCCAGAGAGCCCAGCCAAATTCGGCGAGCTGCTATTGCGAATTCCCGAATTGCAAAGAACTTGTCAAGTTGGTAAAGAAATGCtgacaattaaatcaaaagaCGGCGAGGGACCAAGCTTTAATTTACTTATGGAACTTCTACGCGGTgatcattga
- Protein Sequence
- MAADMRSPNVSVTPINIEPPYPPPPAISVEPTAVLPKHNEPPFDSSDAEVAQIDFQSSVHLRHKIKRDPECGDVVVPRPMSWEGELSDGEREMCIDDDHGHVPENLSMQHNHQATPERQTTIIANNNSKESPVMRLKQAHTNYSLHSTPSNSPLLSQRHTMPPVMVAKDLVHKALNVPPTPSPDSAVHSAYSVFSSPTQSPLTQRHVTLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMPGIHGSPLHHNVLYRNLQEDSNTQFTTASDHDNLDDSQGDDKTGLVHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYHCLRGAVCPVTVATRKKCPACRFEKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLANHSELRASSSDLRHGSLDGQHMGGFSVKLEPSESQSHGKKFSARHGVPPLLQEIMDVEHLWHYTELELNKLNTEGSLGREGSSGAIHNLSIHPLLAGTALAGSTDTNPDFLANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLAQARDQGMQACIERMLNFTEQLRRLRVDRYEYVAMKVIVLLTSDTSELREADKVRASQEKALKALQDYTLTHYPESPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGEGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629851;
- 90% Identity
- iTF_00049313;
- 80% Identity
- iTF_00083944;