Anig002420.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anaulacaspis nigra
Gene Symbol
tfip11
Assembly
GCA_030264675.1
Location
JARJDV010001805.1:45967-48974[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.3e-95 7.7e-91 304.4 15.2 1 275 387 656 387 656 0.97
2 2 0.67 5.5e+03 -3.5 0.0 243 270 669 696 662 700 0.60

Sequence Information

Coding Sequence
ATGTCTGAAGATGAAGTAGAAAAGTTTGAGATAACAGATTATGATATTGAAAACGAGTTCAACATTAACAGAAAGCGTAGAGGCAACTCCAAGCATCAGCAAATATAtgGCATATGGGCTGATGATTCTGAcgatgaatatgaaaataagaaTCCATCAAAGTCCAAAGCCAAATCATATACATCACCAATTGGATTTGTGTCTGGAGGCACACAACAAGCAGgaaagaaacaagaaaaagctAAGGCGGCAAGTGAAAAGTCTGATGATGAGCAACCAACAACATCATTTAAGCAACAAAACTCCAGTGATTCTGAGGAAGAAACGTTTTCAAGGCAGGGTTTTGGTGCAccaaaatcaaaacaaactaATTTTGAGATGAGTGGTGATATTGCTGGCCTAAGAAATAGGAACAGTTATAACCCACAATTCTTAAATAAAGGAGTTGGCACCTGGGAGAAACATACAAAGGGAATTGGAGCTAAGCTATTGCTGCAGATGGGCTATCAACCAGGTAAAGGTTTGGGTAAAGATCTTCAAGGAATATCTGCACCTGTTGAAGCACATCTCAGAAAAGGTAGAGGTGCTATAGGTGCTTATGGCCCTGAGAAGCCTGCAAGTGTTGCCCCAGTTATTGATGTTACAAAACctgaagatattttattggataaaaagcaatcaaaatggaaaaaagatGCTACTAAAAAAACCAGATATTATTATAGAAGTGCTGATGAAGTTATTGAGAAAGGGAAAAAGCCTGGAATGTCTAAAAATACTATATTAAgTGATTTAAGCAAAGTCAAAGTTATTGATATGACTGGACCACAACAAAGAGTTTTAAGTGGTTATCATGCCTTATCTGGTTTAAAGGCACCTTCAGGCGTTGAACATTTTGAGGatgttttacataaaaaatgtacaaattttaGTCTACCTGAGAtgcaacataatttaaatattctagtTGAAATGTGTGAACAGGATATAATACATATTGATCGTAGCACACATTATAATCAAGATCAAATCGTTTCATTAGAGCAGGAAGAAGTACAGCTCAAAAAGCTCTTAATTAAGGAGGATAATGATgttaaagatttaaaatatgttcTTGACATTGTAAACCAACTTGTTGACCCTTCAAATAGTTTATCACTAGGACAAGTTGctgattattttaaaaagttgcagCACAACTATTTCGAAGAATATTGTCAATATGAACTTAATGAATTAGCACCGGGATTAGTTGGTCCTTTATTAACATCAGCGTTGGCTAACTGGATGCCATTAACACAGCCAACTCTCTATTTGGAAGTGTACTCCCAGTGGCAAGACCTGTTGACGAATCACCGTGGGACAATAGAAGGTAATAGTATGGGAATTCAGCCGTATGATAGTCTCTTATGGCATACTTGGGTGCCTGTAATGAGAACGTGTGTTAGTGATTGGATAGCTCGTGATTGTGATCCCTTAATACATGTGTTGGAATCGTGGAAACCTGTTTTGCCGCCATGGATATTGAATAATGTGTTGGAGCAATTGGTAATTCCGAAATTAGTTCAAGAAGTTACAAACTGGGATCCAGTTACTGACACAGTACCCATCCATACATGGATACATCCATGGATACCGCTACTAGATTCAAAATTAAACGATACCATATACCCAATCATTCAAGAGAAGTTGGGTGTTGCTTTAGTCAATTGGCATCCATCTGATAAATCGGCAAAGTTAATGCTGAAGCCGTGGCAGAGGGTTTTGCCGGAAGGgcaatttgttgtatttttagtgAAGCACATTGTTCCAAAATTACAactttgcattcaaaatttgaCGATAAATCCACAGGAACAACATTTAGAGGCATGGCATTGGGTAATGTACTGGAGTGATATGATCTCAGTTGGTAATATGACCCTGCTTTTGGACAAATTCTTCTTTCCACGTTGGCTGCAAAGACTTGCCCTATGGCTAAATCACAATCCTGATTATATTCAAGTTACTGAGTGGTACTCAGGTTGGAAGCGAATGATGCCAGCAGGATTATTAGAACAACCCACGATAAAAGATAATTTTCATAAGGCTCTGGAGATGATGAATCGTGCGGTTGGAAATGGTCACCAGCCTGGTGCAAAAGAATCTATTTCGTATCTTACAAATATCGAAACATTGCCTCAACCACCACCTGCTCCACGAATTGATACAATGCCGCAAGCATTAAGGCATGCGTCAAACATACCACAAGGTTTCAAGGATCTCATTGCAAAACGCTGCGAAGAACGTGGAATCATATTTGTGCCTATACCTAATAAATATCATGAGGCAAAACAAGTTTATAGGCTCGGCGCAAACGGCACGCAATGTTATATAGATCGAAATGTTGTCTTCTATagtcaaaataattcaacgtgGCTTCCCACATCATTAACACGTTTATTAGATATGGCATAG
Protein Sequence
MSEDEVEKFEITDYDIENEFNINRKRRGNSKHQQIYGIWADDSDDEYENKNPSKSKAKSYTSPIGFVSGGTQQAGKKQEKAKAASEKSDDEQPTTSFKQQNSSDSEEETFSRQGFGAPKSKQTNFEMSGDIAGLRNRNSYNPQFLNKGVGTWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKPASVAPVIDVTKPEDILLDKKQSKWKKDATKKTRYYYRSADEVIEKGKKPGMSKNTILSDLSKVKVIDMTGPQQRVLSGYHALSGLKAPSGVEHFEDVLHKKCTNFSLPEMQHNLNILVEMCEQDIIHIDRSTHYNQDQIVSLEQEEVQLKKLLIKEDNDVKDLKYVLDIVNQLVDPSNSLSLGQVADYFKKLQHNYFEEYCQYELNELAPGLVGPLLTSALANWMPLTQPTLYLEVYSQWQDLLTNHRGTIEGNSMGIQPYDSLLWHTWVPVMRTCVSDWIARDCDPLIHVLESWKPVLPPWILNNVLEQLVIPKLVQEVTNWDPVTDTVPIHTWIHPWIPLLDSKLNDTIYPIIQEKLGVALVNWHPSDKSAKLMLKPWQRVLPEGQFVVFLVKHIVPKLQLCIQNLTINPQEQHLEAWHWVMYWSDMISVGNMTLLLDKFFFPRWLQRLALWLNHNPDYIQVTEWYSGWKRMMPAGLLEQPTIKDNFHKALEMMNRAVGNGHQPGAKESISYLTNIETLPQPPPAPRIDTMPQALRHASNIPQGFKDLIAKRCEERGIIFVPIPNKYHEAKQVYRLGANGTQCYIDRNVVFYSQNNSTWLPTSLTRLLDMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00049268; iTF_00048633;
90% Identity
iTF_00049268;
80% Identity
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