Basic Information

Gene Symbol
Arid4b
Assembly
GCA_030264675.1
Location
JARJDV010003581.1:72729-78744[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-28 5e-25 87.6 0.8 1 89 316 401 316 401 0.96
2 2 0.91 1.9e+03 -0.8 0.0 8 45 908 947 906 961 0.78

Sequence Information

Coding Sequence
ATGGCGAACGCCAGTCGCCAGCCAGTTGGCCCCGCTGTTCATGATAACATGTTTTCCTTTTGCAATTTCCAGCAAGGAGACGATCCTCCTTACTTAACTGTCGGAACTGCAGTTAGTGCGAAATACAAAGGTGCATTCTGTGAAGCCAAAGTGAGCAAAGTTATTCGTATCGTAAAATGcaagATCACTTTCAAAATGGGCTTGGGTACCGCCACTGTGAGTGATGATGCAATCAGAGGTACACTAAGAATCGGACAGGTTGTCTCGGTGAAACATCCCGACCGGAAAGAGTATGTGGATGCAACAATAACCAAGATACAAGACTGCAGCCAGTACACTGTTGTATTTGACGATGGCGATATAACAACGCTGCGGAGATCCGCGCTGTGCCTGAAAAGTGGGAGACACTTTAATGAAAGTGAAACACTTGATCAATTGCCGTTAACTCATCCAGAACATTTCGGAAATCCAGTGATGGGCGGCAGAAGAGGACGCCGAAGTCGGCAGCTCAAAGAAGATAGCAGCGATGGCGAAGGCGAGGAGGAAAACGAGCCTGACTTGGAAGTGTATAGTGCCGACATTGGTCGTGTTGTGGCAATTGAAGGATCTGATAAGAAGCGAACCAAAGATAATTGGTTTCCTGGTCTTATCGTCATTCCATCGGCACAGCCTACGGTTCGAATCAATGTGAAGGACGAATTTCTTGTTCGTTCCTTTCGCGATGGCCGATATTATACCGTTCCAAAGAAAGAAACCAACGAATTTAAACGGGATATGAAGGCGGACAGTCCCTATTTAATGGATGCTATTAATAGAGCGCTCAAATTCCTCGACAGCGATGAACTACCAGCGCACTGGGAAAGAAATTCCCTGTTCAATTCACAAACGCAATTTTCTGAATCTGATGATAATTATTCTGATACATCTGACGATGAGCCGACTGAGGAAAAAGATCATTTTGTTGCCCAACTATATAAGTTCATGGACGACAGTGGTACACCCTTGAATAAAACACCAACGATTGCCAACAAAGATGTGGACTTTTACAAACTGTTTCGGCTCGTGCAAAAGATGGGCGGTTATAATCGTGTGTCGAATCAAAACAAGTGGAAGTCGGTGACGGCGCGATTGAAACTGCCTCAAAATCAAAACATCTATAATCAAGTGAAGCAAGTGTATAAGAAGTGTCTAGTCAGCTACGAATCATTCTACCGTACGTTAGGATGCACCATGTTGAATCCAACGCGCAACGCCAAGAAGAATCGGGGCCGATCTCTGATCCGCGACAAGGATCGCATGACTCCCGTGCAGAGTCCCAAGCCCGATAAAGAGGTTAAGGAGGACGAGCCGTCCGATGCGAAGAAAGAGGAAGAGAAGAAGGACGACGAAGTTATGAAGTCGCCACGAGTTAAAAAGAGTGAGAAGAAAAGTGATGAGGAGAAGAAATCAACGAAGCGGGATCAGCTGCAATCAACTACTGAAAGTAGTGATAACAGCAGCGATGCTACTGATCCTATTGACGCGGCTGGTCCTTCGAAAGAGCGTCCAAAACGCGCCGACTCGGtcaagaaagaaaagaaggtCAAGCCACCATCTGGCGAAAAAGTGAAAGCGCTTGTGGAGAAGTTTGAGGACAGTGCCAAGAAGAATGAGAAGGAGGCGGAAAAAGATGAGGATAAAGAGCGCGAAAGGGAGAAAAGCAAGGAGAAGGATAAAGACAAGCAAGCGCAGCAAACACGTTCTAAAGGTCAGGCTTCCAAGACTAAGGAAAAAGACAAAGATAAAGACAAGGATAAAGATAAAGAGAGCAAAGAAAAAGACAGTGATTCTTCCGATAAGAAATCACCTGAACCTAAAACTGTTGCGAGGGACAAGGATAAAGATAAGGACAAAGAAGCAAAGAGTGTGGTGAAAAGTAGTAGCAGTAAGAAATCTTCGTCTGACGAAGATAAGGAAAAGAAGCGCGGACGTAAACGCGCTCATCCAGAGGATAAGGAAAAGTCGGTTAGTGAATCATCTGATACATCGGTGCCCAATACGGCAAAAGAGAAGGATAAGGAAAAGGGTTCCGTGAATATAGGCGATAAACTAAAAGTCTATTATGGCCCCACGCATGAGTCAAAAGTTACTTATGAAGCtaaagttattgaaattgataaagatTCACCTGGGCAAATGCTGTACTTGGTTCATTATACTGGTTGGAATAACCGTTATGATGAATGGATTAATGTGGGTCGCATTGCCGAAAACCTTAGCGCAACAACGAAAGCGAAACGCCTGAAGCAAAGTGCCAGCGGCATCAAATCCAGTCCGAAAACAGCGGGTAAACGTGGACGCGGTATGTCCATCACTGGTCGAAGTACAGTACAAGAAACACCTCGTTCGACCACGCCGTCTAGTgtaacatcatcatcaagccGTACTAAGAGTCCTGGGACTCCTATTTCGCGTAATCGAAGCACGCGTGGTGAAAGTGCGCGACGCACGAGGCGCACCTCAGCACAAACAGACGTATCCGCGATTTCCGGGTCTGAATCGGACGATAATGACCGCTCCGAAAGTGATTTTGAACTCTCGCGTACGCGGAGTGGTAGTAAATCAGACGATGTCGAGGGAAAATTACCGTTCAAGCGCAAACTGATTAAAACCAAAGGTGAGAAACGTaaagacgatgatgatgctggCGACAAGGATGACGATGAAAAGCCCAAAAAGCGCAAACTTAAAAAGTTTGCTGAAATTAAATCAGATAGTGATGATGAATTGCCCGTCGTTCAACCAAAGGGACGTGAATTCGATCTTAATCAAATACGTTCCGAACTTAAAGGTTTCGGGAAACCGGTCAAAGTGGGTTCCGATTCATCTGAGAAATCTTCAACTGGCGCAGCATCTCCTATTGAAGATGCGCCTGAACCTACGTTTAGTAAAGCACTGTCTGAACCAGAGCtcgaagaaaagaaagaaaaatgtgcCGAGAAAGCAACCAATTCGGACGATGTTTACGAGTTCAAAGAACCAGAACCATTTGAATTTGGCTCCCGTAAAATAACggatgataaaaataaaaagagaaTACCCCGGTTGCTCGAAGAAATGGAGAAATCACCACCGAAAAAGAAAGTACAATCTCCTAAATCACCTGTAAAGCTGGAAAAAGATACATCTCCAAAAGATTCATtaaaagaagagaagaaacGTAATAAGAAGTCTTCACCGCAAGCGAAAAAGATTGATGAACCGATTGAGGAAGAGATTCTTACAAAAACTGAAGTGAAGGAAGACCTTGCTGCAATTAAATCCGAAGATCCATTCGATAAGTTAGTCGAATCTCCTTCATTCCATGTCGGTAAAACTACGCCTGTGACTCCCGAAAAAGCATCACCTGAAAAGCCCAAAGAAGACCCGGAACCACTGAGTATCTTCGATTTACCTGAATACAATGAAGATAACAGTGAGGATCGTTTAGAATTATCTGATACCGATGAACGCACTCCGGAGCTGACGTTCACGCGTGAGAGTCCACTGTTTAGCAACTTTGGTAAACCATCGCCTGACCATATCATCGAACCCGCTTGCGATAGCTTCGACAGTTCGAAATCAAAGGACGCTAAGCAGAAAGACAGCGAGGACGATGAAGATTCCAATTTGCAAGCATCTATTCAACGCGCGCAATCAACACTTACAAACATATTGGATTCGTGTTCAACCATTATTGATTCATCAAAGTCGACTGAGAATACAATAACTATCAATCGTGCTGAACCTGAGGAGGAATTCCCAATTGAGCCTCCAccagaaaatgaaataaaagaaattgcgCAACTGCCGAAACAAATATCCGCAGTGTTCCAAGAATCGGATAGCTCCATTCTTGAGGATTTATACAATCCGCCCCAAACCAAATCTGAAGATATCAAGGATCTCAATGTAAAGACAGGTACAAAAATAGCGGACTCCATCctacaaaaattaatcaaaaacatggAAAGCCCGCCTCCAACATCGCCAAAACCAGAAGAGGCGAAAACATCTCCTTTAAAAGTCGAAGAGAAGAAGGATCCAGAGCCTTCTGTTTCAGTAATCCTGCCATTGCCAGATATAAATACTGAGACGAAAGTGATAAAGCTGATGGAATCGAAATCGTCTAAACCCGAAACCAAGTCAATGTGCAAAGTAGTACCAAAACCCGACGTGCCATCAAGCAAGCCCAAGCTTGAGGTGAAATCAAAAACGCCACCAGTTAAAAAGCCAGAAACCGAATACAAAAAACGGCCGTGCAAAGTGCGTACACCAAAGTACGTCGAAGAAAGTGATAGTGATACGGACAGCGATGCGGATGATCGTCTAGTAATTGCACGCATAGATGAAGAATCTCAATCGAGTTCCTCGTCCGATAAGCCGACTGAGGAAGAAAGTAGTCCGCTTGAAACCAAGgtgattgcaattattgatCCCGAACAAGCTGAGATCGATgagcaaaaattcaaatacgatTTCCCCGAAGAGCCGCCCATCAAAACTGAAGAACCGGAAGAAGTTAAGGAAGAGGAGCCAGATTCGCAGCTTCATTCCATGCTGCTGTGCGAGGAAACAATACCTGGAAGTCCGGCACCAGCACCcacaattgaaacaaaacCAAAACCCAAAGCTGTCATGGAGATGCCATTCGCCAGCGCTccaagcagcagcaacaataaatgtGCAATCATTCAGCAACAACCAGAGAAGCCGCCATCACCGcctgcaaatattttaccgATGGCAAATCGAGATAGCAGTGCCAATGCAGTCCTAGATAATACACCGCCCACTACGCCGGAAAGTACAATTAGCAATATGTCACCTCGAGGgGAAATTGGCAATCTATCACCAAATAACGCTGATAACGATAGTGGCAAGTCAATGGAAGCTGAAACGGATTACTCTGTGACGCAAAGACGAGCAGCGGCAacaaaagtaacaaattaTAGCGAAGAAGATTCTTTATCTTTAAATTGTGAACCACATACCAGTACCAAAAAACGTGAGGATATGCCTTCAATGTGCAAAAAACGTCGGCGTTCATGTAAGGGCGAGAACGATATGCCCGTGAAGAGGGGCCGGAAACCAAATAGATCTCGACACAATAGTGACAGTGATACGTCTGAGCATTCAATGCATGCAATTATGGCTAATTTAGATGCGCGCCTCGCACGATCTCCCAGACCATCAAAATACAACTTCTTCGTTGAATTAGATCCAAGCCTGGATAGTGCGGCACGCATAGCAGTATTACTTCAAAAATTACAAGACTTACGAAAAACTTACGCGGACGTTAAAGCCGAGCTGGTGACCATTGAACGGCGACGCAAGAAAATACGTAGACGAGAACGCGAAGCATTAAAAGCAGCTAAACAAGAGATGGCTTGCACGTGA
Protein Sequence
MANASRQPVGPAVHDNMFSFCNFQQGDDPPYLTVGTAVSAKYKGAFCEAKVSKVIRIVKCKITFKMGLGTATVSDDAIRGTLRIGQVVSVKHPDRKEYVDATITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFGNPVMGGRRGRRSRQLKEDSSDGEGEEENEPDLEVYSADIGRVVAIEGSDKKRTKDNWFPGLIVIPSAQPTVRINVKDEFLVRSFRDGRYYTVPKKETNEFKRDMKADSPYLMDAINRALKFLDSDELPAHWERNSLFNSQTQFSESDDNYSDTSDDEPTEEKDHFVAQLYKFMDDSGTPLNKTPTIANKDVDFYKLFRLVQKMGGYNRVSNQNKWKSVTARLKLPQNQNIYNQVKQVYKKCLVSYESFYRTLGCTMLNPTRNAKKNRGRSLIRDKDRMTPVQSPKPDKEVKEDEPSDAKKEEEKKDDEVMKSPRVKKSEKKSDEEKKSTKRDQLQSTTESSDNSSDATDPIDAAGPSKERPKRADSVKKEKKVKPPSGEKVKALVEKFEDSAKKNEKEAEKDEDKEREREKSKEKDKDKQAQQTRSKGQASKTKEKDKDKDKDKDKESKEKDSDSSDKKSPEPKTVARDKDKDKDKEAKSVVKSSSSKKSSSDEDKEKKRGRKRAHPEDKEKSVSESSDTSVPNTAKEKDKEKGSVNIGDKLKVYYGPTHESKVTYEAKVIEIDKDSPGQMLYLVHYTGWNNRYDEWINVGRIAENLSATTKAKRLKQSASGIKSSPKTAGKRGRGMSITGRSTVQETPRSTTPSSVTSSSSRTKSPGTPISRNRSTRGESARRTRRTSAQTDVSAISGSESDDNDRSESDFELSRTRSGSKSDDVEGKLPFKRKLIKTKGEKRKDDDDAGDKDDDEKPKKRKLKKFAEIKSDSDDELPVVQPKGREFDLNQIRSELKGFGKPVKVGSDSSEKSSTGAASPIEDAPEPTFSKALSEPELEEKKEKCAEKATNSDDVYEFKEPEPFEFGSRKITDDKNKKRIPRLLEEMEKSPPKKKVQSPKSPVKLEKDTSPKDSLKEEKKRNKKSSPQAKKIDEPIEEEILTKTEVKEDLAAIKSEDPFDKLVESPSFHVGKTTPVTPEKASPEKPKEDPEPLSIFDLPEYNEDNSEDRLELSDTDERTPELTFTRESPLFSNFGKPSPDHIIEPACDSFDSSKSKDAKQKDSEDDEDSNLQASIQRAQSTLTNILDSCSTIIDSSKSTENTITINRAEPEEEFPIEPPPENEIKEIAQLPKQISAVFQESDSSILEDLYNPPQTKSEDIKDLNVKTGTKIADSILQKLIKNMESPPPTSPKPEEAKTSPLKVEEKKDPEPSVSVILPLPDINTETKVIKLMESKSSKPETKSMCKVVPKPDVPSSKPKLEVKSKTPPVKKPETEYKKRPCKVRTPKYVEESDSDTDSDADDRLVIARIDEESQSSSSSDKPTEEESSPLETKVIAIIDPEQAEIDEQKFKYDFPEEPPIKTEEPEEVKEEEPDSQLHSMLLCEETIPGSPAPAPTIETKPKPKAVMEMPFASAPSSSNNKCAIIQQQPEKPPSPPANILPMANRDSSANAVLDNTPPTTPESTISNMSPRGEIGNLSPNNADNDSGKSMEAETDYSVTQRRAAATKVTNYSEEDSLSLNCEPHTSTKKREDMPSMCKKRRRSCKGENDMPVKRGRKPNRSRHNSDSDTSEHSMHAIMANLDARLARSPRPSKYNFFVELDPSLDSAARIAVLLQKLQDLRKTYADVKAELVTIERRRKKIRRREREALKAAKQEMACT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00049040;
90% Identity
iTF_00049040;
80% Identity
-