Basic Information

Gene Symbol
Arid4b
Assembly
GCA_963978815.1
Location
OZ022216.1:12342242-12348200[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-28 4.8e-25 87.6 0.8 1 89 300 385 300 385 0.96
2 2 0.13 2.2e+02 2.1 0.0 7 51 891 937 888 964 0.84

Sequence Information

Coding Sequence
ATGTTTGCCTTTTGCAATTTCCAGCAAGGAGACGATCCTCCTTACTTAACTGTCGGAACTGCAGTTAGTGCGAAATACAAAGGTGCATTCTGTGAAGCCAAAGTGAGCAAAGTTATTCGTATCGTAAAATGcaagATCACTTTCAAAATGGGCTTGGGAACTGCCACTGTGAGTGATGATGCAATCAGAGGAACACTAAGAATTGGCCAGGTTGTCTCCGTGAAACATCCCGACCGCAAAGAGTATGTTGATGCAACAATAACCAAGATTCAAGACTGCAGCCAGTACACTGTTGTATTTGACGATGGCGATATAACAACGTTACGGAGATCTGCGCTGTGCCTGAAAAGTGGGAGACACTTTAATGAAAGCGAAACACTTGATCAATTGCCGTTAACGCATCCAGAGCATTTCGGAAATCCAGTGATGGGCGGAAGGAGAGGACGTCGAAGTCGGCAGCTCAAAGAAGACAGTAGTGATGGTGAAGGCGAGGAGGAAAACGAACCAGACTTGGAAGTGTATAGTGCTGATATCGGCCGTGTTGTGGCAATTGAAGGATCTGATAAGAAGCGAAATAAAGATAATTGGTTTCCCGGTCTTATCGTCATTCCATCGGCGCAGCCTACGGTCCGAATCAATGTGAAGGACGAATTCCTTGTTCGTTCTTTTCGCGATGGGCGATATTATACCGTTCCAAAGAAAGAAACCAACGAATTTAAACGGGACATGAAGTCGGATAGTCCCTATTTAATGGACGCTATTAATAGAGCGCTCAAATTCCTCGACACCGATGAACTACCAGCGCACTGGGAAAGAAATTCCCTGTTCAATTCGCAGACGCAGTTTTCCGAATCCGATGATAATTATTCAGATACATCTGATGATGAGCCAACTGAGGAGAAGGATCACTTTGTTGCCCAACTGTATAAATTTATGGATGATAGTGGTACACCCTTGAATAAAACGCCAACGATAGCCAACAAAGATGTGGACTTTTACAAACTGTTTCGGCTCGTGCAAAAGATGGGCGGTTATAATCGTGTGTCGAATCAAAACAAGTGGAAGTCGGTGACGGCGCGACTGAAACTGCCTCAGAATCAAAATATCTACAATCAAGTGAAGCAAGTGTATAAGAAGTGTCTAGTCAGCTACGAATCGTTCTACCGTACGTTAGGATGCACCATGTTGAATCCAACGCGCAATGCCAAGAAGAACCGGGGCCGATCTCTGATCCGCGATAAGGATCGCATGACTCCCGTCCAGAGTCCCAAGCCCGATAAAGAAGTGAAGGAGGATGAACCGCCCGAAGTAAAGAAAGAGGAAGAGAAGAAGGACGACGAAGTTATGAAGTCGCCGCGTGTGAAAAAGAGCGAGAAGAAAAGCGATGAGGAGAAGAAATCAACGAAGCGCGATCAGTTGCAACCGACTACTGAAAGTAGTGATAATAGTAGCGATGCGACTGATCCGATTGACACGGCTGGACCTTCGAAAGAGCGTCCAAAGCGCGCGGACCCTGTCaagaaagaaaagaagatCAAAGCACCGTCTGGTGAAAAAGTAAAAGCACTCGTTGAGAAGTTTGAGGAGAGTGTCAAGAAAAATGAGAAGGAAGCTGAAAAGGATGATGATAAAGAGCGCGATAGGGAGAAGAGTAAAGAGAAGGATAAAGATAAACAATCGCAGCAAACACGTTCTAAGGGGCAAGCGTCCAAGAGCAAGGAAAAAGACAAAGATAAGGAGAAGGATAAAGATAAAGAGAGTAAAGAAAAGGACACTGATTCTTCTGATAAGAAATCACCGGAACCTAGAACTGTTCCAAAGGACAAGGATAAAGAGAAGGACAAAGAATCTAAGAGTGTGATGAAAAGCAGTAGCAGCAAGAAGTCATCGTCTGATGAAGATAAGGAAAAGAAACGCGGTCGAAAACGTGCTCATCCAGAGGATAAGGAAAAGTCGGTTAGTGAATCATCTGATGTATCAGTCCCCAGTACATCAAAAGATAAGGATAAAGAAAAGGGTTCGGTGAATATTGGTGATAAACTGAAAGTATATTATGGACCAACGCACGAATCCAAAGTTACTTATGAAGCTAaagttattgaaattgataaagATTCACCAGGGCAAATGTTGTACTTAGTTCATTACACCGGCTGGAATAACCGTTATGACGAATGGATCAATGTGGGTCGCATTGCTGAAAACCTTAGTGCAACAACGAAAGCGAAACGTTTGAAGCAAAGTGCCAGCGGTATCAAGTCCAGCCCAAAAACAGCGGGCAAACGGGGACGCGGTATGTCCATTACCGGTCGAAGTACAGTGCAAGAAACACCTCGTTCAACTACACCGTCCAGTGTCACTTCATCATCTAGCCGTACTAAGAGTCCAGGTACTCCAATATCGCGTAATCGCAGTACGCGTGGCGAGAGTGCGCGACGCACAAGGCGTACGTCCGCGCAAACGGACGTATCTGCTATTTCTGGGTCCGAATCGGACGATAATGACCGGTCCGAAAGTGATTTTGAACTCTCGCGTACGCGCAGTGGTAGCAAATCAGACGATGTAGAGGGAAAGCTACCGTTCAAACGTAAGCTGATTAAAACCAAAGGTGACAAACGTAAAGACGATGACGATGCTGGCGACAAGGATGAAGATGAAAAGCCCAAGAAGCGTAAACTTAAAAAgtttgttgaaattaaatCCGATAGTGACGATGAAATTCCTGTCGTTCAGCCCAAAGGACGTGAATTTGACCTTAATCAAATACGTTCAGAACTTAAAGGTTTCGGTAAACCGGTCAAAGTGTCATCTGATTCGTCGGAGAAGTCTTCAACTGGCGCGGCATCTCCTATTGAAGATGCACCTGAACCTACTTTCAGTAAATCTCTGTCTGAAACGGAGCTCGAagagaagaaagaaaaatgtGTGGAGAAACCAACCAATTCAGATGATGTTTACGAATTCAAAGAACCAGAACCATTTGAATTTGGTTCCCGTAAGATAACggatgataaaaataaaaagagaATTCCACGGTTGCTCGAGGAAATGGAGAAATCACCGCCGAAAAAGAAAATCCCAACGCCAAAATCACCTGTCAAGCAGGAAAAGGAGACGTCTCCAAAAGATTCGttaaaagaagaaaagaagcGCAATAAAAAATCCTCACCACAATCGAAAAAGGTTGAAGAGCCGATTGAGgaagaaattcaaaaaattgaaGTAAAGGAAGAAGTTGCTGCAGTTAAATCTGAGGATCCGTTCGATAAGTTGGTCGAATCTCCTTCGTTCCATGTTGGTAAAACAACGCCTGTGACCCCAGAAAAAGTATCACCTGAGAAGCCCAAAGAAGAACCGGAACCTCTTAGTATCTTCGATCTACCTGAATATAATGAAGATAATAGTGAGGATCGTTTAGAATTATCCGATACTGATGAACGTACTCCCGAGTTGACGTTTACGCGTGAAAGTCCGCTGTTTAGCAACTTTGGTAAACCATCTCCAGACCATATCATCGAACCCGCTTGTGACAGCTTCGACAGCTCGAAATCAAAAGATGCCAAGCAAAAGGACAGCGAAGATGACGAAGATTCCAATTTGCAAGCATCCATACAGCGCGCGCAATCAACACTTACGAACATACTGGATTCGTGTTCGACCATTATGGATTCATCAAAATCAACAGAGAATACAATAACTATAAATCGCGCTGAGCCCGAAGAGGAATTTCCAATTGAGGTTCCTcctgaaagtgaaacaaaagaaatagCGCAACTGCCGAAACAAATATCGGCGGTATTCCAAGAATCGGATAGCTCAATTCTCGAGGATTTATACAATCCGCCCCAAACTAAATCTGAAGATATTAAGGATCTCAATGTAAAGACAGGTACAAAAATAGCGGACTCTAtcttacaaaaattaattaaaaacatggAAAGCCCGCCTCCAACTTCGCCAAATGCGGAAGAGGTGAAAAGCGCTCCTTTGAACGCTGAAGAGAAGGATCCAGAACCTTCTGTGTCAGTAATCCTGCCATTGCCAGATACAAAATCAGAGACGAAAGTGATAAAACTGATGGAGTCATCAAAATCGTCAAAACCCGAAACCAAGTCAATAACTAAAATAGTACCAAAACCCGAAGTGTCAGCAAGCAAACCAAAACAGCTCGAGACAAAATCGAAAACACCACCAGTTAAAAAACCGGAAACCGAATACAAGAAACGGCCGTGCAAAGTGCGCACACCAAAGTACGTCGAAGAAAGTGATAGTGATACCGACAGTGATGCAGATGATCGTCTAGTAATTGCGCGCATCGATGAAGAATCGCAATCGAGTTCGTCGTCAGATAAGccgaatgaagaagaaagtaGTCCACTTGAAACCAAGGTGATTGCAATTATTGATCCCGAACAGGCTGATATTGATGAgcagaaattcaaatatgATTTCCCCGAGGAGCCAACCATTAAAACCGAGGAACCAGAAGAAGTCAAGGAAGAGGAGCCAGATTCGCAACTTCACTCGATGCTTCTGTGCGAGGAAACCATACCCGGAAGTCCAGCGCCGGCACCCACAACAgaaacaaaaccaaaacccaAAGCTGTCATGGAGATGCCATTCGCGAGCGCTccaagcagcagcaacaataaaTGTGCAATCATTCAACAACAACCAGAGAAACCACCAACACCGCCTGCGAATATTCTGCCATTGGCAAATCGAGATAGCAGTGCAAATGCTGTCTTGGATAATACACCACCAACTACGCCGGAAAGTACAATTAGCAATATGTCACCAAGAGGGGAAATTGGCAATTTATCACCAAACAACGCTGATAACGACAGTGGCAAGTCAATGGAAGCTGAAACGGATTACGCTGTGACGCAAAGACGAGCAGCAGCTACAAAAGTGACAAACTATAGCGAAGAAGATTCTTTATCTTTAAATTGCGAACCACATACCAGTACCAAAAAGCGCGAGGAAATGCCTTCAATGTGCAAAAAACGTCGGCGTTCGTGTAAAGGCGAGAATGACATGCCGGCAAAGCGGGGCCGGAAACCAAATAGATCTCGACATAATAGTGACAGTGATACGTCTGAGCATTCAATGCATGCAATTATGGCTAATTTGGACGCGCGCCTCGCACGATCTCCCAGACcatcaaaatacaatttctttgtagAATTAGaTCCAAGCCTGGATAGTGCGGCACGCATAGCAGTATTACTTCAGAAATTACAAGACTTACGAAAAACTTACGCGGACGTTAAAGCCGAGCTAGTAACCATTGAACGGCGACGCAAGAAAATACGTAGACGAGAACGCGAAGCATTAAAAGCAGCTAAGCAAGAGATGGCTTGCACGTGA
Protein Sequence
MFAFCNFQQGDDPPYLTVGTAVSAKYKGAFCEAKVSKVIRIVKCKITFKMGLGTATVSDDAIRGTLRIGQVVSVKHPDRKEYVDATITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFGNPVMGGRRGRRSRQLKEDSSDGEGEEENEPDLEVYSADIGRVVAIEGSDKKRNKDNWFPGLIVIPSAQPTVRINVKDEFLVRSFRDGRYYTVPKKETNEFKRDMKSDSPYLMDAINRALKFLDTDELPAHWERNSLFNSQTQFSESDDNYSDTSDDEPTEEKDHFVAQLYKFMDDSGTPLNKTPTIANKDVDFYKLFRLVQKMGGYNRVSNQNKWKSVTARLKLPQNQNIYNQVKQVYKKCLVSYESFYRTLGCTMLNPTRNAKKNRGRSLIRDKDRMTPVQSPKPDKEVKEDEPPEVKKEEEKKDDEVMKSPRVKKSEKKSDEEKKSTKRDQLQPTTESSDNSSDATDPIDTAGPSKERPKRADPVKKEKKIKAPSGEKVKALVEKFEESVKKNEKEAEKDDDKERDREKSKEKDKDKQSQQTRSKGQASKSKEKDKDKEKDKDKESKEKDTDSSDKKSPEPRTVPKDKDKEKDKESKSVMKSSSSKKSSSDEDKEKKRGRKRAHPEDKEKSVSESSDVSVPSTSKDKDKEKGSVNIGDKLKVYYGPTHESKVTYEAKVIEIDKDSPGQMLYLVHYTGWNNRYDEWINVGRIAENLSATTKAKRLKQSASGIKSSPKTAGKRGRGMSITGRSTVQETPRSTTPSSVTSSSSRTKSPGTPISRNRSTRGESARRTRRTSAQTDVSAISGSESDDNDRSESDFELSRTRSGSKSDDVEGKLPFKRKLIKTKGDKRKDDDDAGDKDEDEKPKKRKLKKFVEIKSDSDDEIPVVQPKGREFDLNQIRSELKGFGKPVKVSSDSSEKSSTGAASPIEDAPEPTFSKSLSETELEEKKEKCVEKPTNSDDVYEFKEPEPFEFGSRKITDDKNKKRIPRLLEEMEKSPPKKKIPTPKSPVKQEKETSPKDSLKEEKKRNKKSSPQSKKVEEPIEEEIQKIEVKEEVAAVKSEDPFDKLVESPSFHVGKTTPVTPEKVSPEKPKEEPEPLSIFDLPEYNEDNSEDRLELSDTDERTPELTFTRESPLFSNFGKPSPDHIIEPACDSFDSSKSKDAKQKDSEDDEDSNLQASIQRAQSTLTNILDSCSTIMDSSKSTENTITINRAEPEEEFPIEVPPESETKEIAQLPKQISAVFQESDSSILEDLYNPPQTKSEDIKDLNVKTGTKIADSILQKLIKNMESPPPTSPNAEEVKSAPLNAEEKDPEPSVSVILPLPDTKSETKVIKLMESSKSSKPETKSITKIVPKPEVSASKPKQLETKSKTPPVKKPETEYKKRPCKVRTPKYVEESDSDTDSDADDRLVIARIDEESQSSSSSDKPNEEESSPLETKVIAIIDPEQADIDEQKFKYDFPEEPTIKTEEPEEVKEEEPDSQLHSMLLCEETIPGSPAPAPTTETKPKPKAVMEMPFASAPSSSNNKCAIIQQQPEKPPTPPANILPLANRDSSANAVLDNTPPTTPESTISNMSPRGEIGNLSPNNADNDSGKSMEAETDYAVTQRRAAATKVTNYSEEDSLSLNCEPHTSTKKREEMPSMCKKRRRSCKGENDMPAKRGRKPNRSRHNSDSDTSEHSMHAIMANLDARLARSPRPSKYNFFVELDPSLDSAARIAVLLQKLQDLRKTYADVKAELVTIERRRKKIRRREREALKAAKQEMACT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00083684;
90% Identity
iTF_00083684;
80% Identity
-