Basic Information

Insect: Anastrepha obliqua
Gene Symbol: L
Assembly: GCA_027943255.1
Location: JAPTHQ010000062.1:1258624-1264724[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.5 70 5.5 5.8 1 23 20 42 20 42 0.98

2 18 2.6e-07 3.6e-05 25.3 3.1 1 23 48 70 48 70 0.99

3 18 1.2e-05 0.0017 20.1 0.3 1 23 76 98 76 98 0.98

4 18 0.64 90 5.2 1.5 2 23 162 185 161 185 0.90

5 18 0.0049 0.68 11.8 0.1 2 23 214 236 213 236 0.96

6 18 0.097 14 7.7 0.9 1 23 328 350 328 350 0.97

7 18 0.51 72 5.5 2.3 2 23 358 379 357 379 0.94

8 18 0.00045 0.063 15.1 0.1 1 23 387 412 387 412 0.91

9 18 3.7 5.2e+02 2.8 0.1 1 19 417 435 417 437 0.88

10 18 1.9 2.7e+02 3.7 0.9 2 23 448 470 447 470 0.95

11 18 0.02 2.8 9.9 4.5 1 23 507 529 507 530 0.96

12 18 0.56 78 5.4 0.3 1 23 704 728 704 728 0.91

13 18 0.0011 0.16 13.8 4.6 2 23 737 759 736 759 0.96

14 18 0.14 19 7.3 0.1 1 23 765 787 765 787 0.92

15 18 0.02 2.8 9.9 0.3 2 23 795 816 794 816 0.97

16 18 0.72 1e+02 5.0 1.0 2 23 914 935 914 935 0.94

17 18 0.016 2.3 10.2 0.3 1 23 945 967 945 967 0.96

18 18 0.087 12 7.9 1.1 1 23 974 996 974 996 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.5	70	5.5	5.8	1	23	20	42	20	42	0.98
2	18	2.6e-07	3.6e-05	25.3	3.1	1	23	48	70	48	70	0.99
3	18	1.2e-05	0.0017	20.1	0.3	1	23	76	98	76	98	0.98
4	18	0.64	90	5.2	1.5	2	23	162	185	161	185	0.90
5	18	0.0049	0.68	11.8	0.1	2	23	214	236	213	236	0.96
6	18	0.097	14	7.7	0.9	1	23	328	350	328	350	0.97
7	18	0.51	72	5.5	2.3	2	23	358	379	357	379	0.94
8	18	0.00045	0.063	15.1	0.1	1	23	387	412	387	412	0.91
9	18	3.7	5.2e+02	2.8	0.1	1	19	417	435	417	437	0.88
10	18	1.9	2.7e+02	3.7	0.9	2	23	448	470	447	470	0.95
11	18	0.02	2.8	9.9	4.5	1	23	507	529	507	530	0.96
12	18	0.56	78	5.4	0.3	1	23	704	728	704	728	0.91
13	18	0.0011	0.16	13.8	4.6	2	23	737	759	736	759	0.96
14	18	0.14	19	7.3	0.1	1	23	765	787	765	787	0.92
15	18	0.02	2.8	9.9	0.3	2	23	795	816	794	816	0.97
16	18	0.72	1e+02	5.0	1.0	2	23	914	935	914	935	0.94
17	18	0.016	2.3	10.2	0.3	1	23	945	967	945	967	0.96
18	18	0.087	12	7.9	1.1	1	23	974	996	974	996	0.95

Sequence Information

Coding Sequence: ATGAAACTGGTATTCTTAATTTTACTTTTGTTACAGAGCCATGCCGAGCATTTACCTTTTAAGTGTGATTATTGTGCTCGACTCTTTAAGCACAAGAGATCGAGAGATCGTCATACCAAACTACACACTGGGGATCGCCGATACCGCTGTCCACATTGTGAGGCAGCATTTTCTCGAAGCGATCATCTCAAAATTCACATGAAAACACACGACAATCAGAAACCATTCCAATGTACGATATGCAATCGCGGATACAATACCGCTGCTGCGTTAACCTCACATATGCAAAACCATAAAAAACAAGCAGCTATTCTAGCAGCAGGAGGAAATCCTCAAGCACTTAATTACAGTCCACGTTCTACTGGATCGGTTTCCAGTAGCGGAAGTTTTCACAAGAGGCGCTATGCCACGACATTGGCTCACACTGATGCTAAGCCAACCCGACTAGATTATCCAAAGCGACCACGAACTGTGAATCTTCTTTCCTGTAACTACTGCTCCAAATCCGAGTTCAACTCGATTGAACAACTCAATGTACATATTCACACAAAGCATGACAAAGAAGTGTTTTCCTCGCAAAAAACACAGCCAATGGCCGCTCTTGGGGCCGCAGTTGCTGAACCAAATCCATTCCAGTTGAGATGTGAGTACTGTACTATGCAATTTGGAAATCTACCTGCGTTATTTCAGCATATACGTCTCGCACATGTCGATCGTTTGGCGAGTCCAAACTCGTACTTCGAACATTTCAATCGTTTAGCTGCATCAGGGACTTTTAGTCCTCGCTTAGTGAGTGAAAAACCCACTTTGAGGGAAGAAAATACTACAAAGGAAAGTAATATTAAGGCAGAACAAAATTTACCATGCTCGGAAAACGCCAATGAGGAAAAACAAGAGGAAGAGCCCACTGACCTTAGCAAAAATAAACGCCGTTCAACAACCCCCGTTTCTCTTCAGGAGGAATCTCTCCAGCCTGACATGTTTTTCTGCAATCAATGCAATGCAGGTCTGCCAGATTTTGAAAAGTTCCGTAGTCATTTAAAAACTCATATAACGCAAGGTTTAAATCTTATTTGCCACCACTGCGGTTTGGCGTTACGGGAACAATCGGAGCACGAGCGGCATGTAATCTCACATTATTTAATCTCTAATTCAGAATATATTTGTGCAAGCGCTAAATGCGACAAATCGTATGCAAAACCTGAGGAGCTTCAAAACCATATGTTGGATCAGCACGCAATCCCTATGTTCAAGTGTGGTGTATGCTCTGAATTATTCGAGTCCAAAATAGCTATTCAGATGCACTTCGCTTGTGCACATTCCGTTGAAACTAAATTATTGCGATGTTCAGTCTGTATGGAATTATTCCAATCTGAGAGAGAGTTCAATACGCACGTAAAAACACGCCATCCAGGACTTAATGGACCAGTGCCCAATTCACTTCAATGTTTGTTTTGTCGAACTGTATGCGGTAATGATTTGGAAATGCATTTTCATCTCGCCGCACATGCTCGCCAATTCCAATGCCCCTCGTGTCCAGAAACTTTTCATGTGGAGTTTCTATTGGATCGACATATGCAACACCATCATACTGGCAATAATCGAGCGGTATTATCTTCAAAAGTATCCCTTGAGGAAGCTTCAATACCATCTAATATGCCGAATCAAATGAACCCTCTTTATGTGAATGCCTTACTTAGCAAAGCTCCCCAGATGCCGATTACTTCGCAAAACAACAACTCTAGTGTTCTTGATTACAATATAGCTTTTGCAGCTCATCTCAATAAAAGCCTTTTCCCTGGTTCCACGGCATCAGCAACTCCATTCACAGACGACAAATTTTATAATGCATTGCAGGTAGATACAGGAGCCGTGAAACACCCTGGGCTCATGTATGGCCTCAGCCAGCGCTATTTCGATACAAGTCGAACACTAATTGAGATGTATACGCAGCAACGAATAGATAAACCAATAGTGGAAAGCTATTTCAATAGTCCGAAGCCGCAATCAGTTACACAGCATTTAAAATCTCAACCAGATTTACATGAAAATCGACCGCCAGCAGAATCGTCAAATCCAACTTCGGTTGGATTAAACTCTTCCATGGGTTACAGCTGTGATATTTGCGAACGCAATGATTTTCGATCTGAAAGTGAGGTGAACTCACATCGTAAAATCGTCCATAACATGAAAACTGGAGTGAGTTTGCGATGCGCCTACTGCTCGGGGAACTTTAAGTCACGTAGCGAATTGGAACATCATATGAAAACGTGTCACAATTCAACTGGAAAACATAAATGTCTGATTTGTGATGAAATTTTTCCCTCGTCAGCTATATTGGCAGAACACAAACTACAACACTCAAAGGTTGGTCAATCTGGCAAATGTTCACACTGCAGTAAGCCCTTGGACGGCGCTTCAGCTTTCAAAGCACATCTTAATGACCATAACAATGAGAGCCAACTTCCAATGCAATGTATTTGCTGTCGACAATCACTTCATTCCGATTTTGAAATCGGTTTACATGCACAATTCCATACCAAATCCTCTAACAATCCAGAAAGTGTGTGTGCTCTTTGCTTAGAACCCATACCAAATCCCATGAATGGCGAAGCTAAAGTTTGTGAAAAGTGCTGCCGAAAGCATAAACTTGGCCCTAAATTTAAAACTCAACGTTTACGTAGCGAAATTTTTGAGCGTGACTCAGAGATTTGTCGAAGCGCATTGAAAACCGAAAATCGCTGCAATATCTGCAAATTAATGCTGCCACACACACAAAAACTACAAGAGCATTTGGTAGAGCACACTTTTGCCGGTTGTGAGGAACGGGGTTTCAATTGCTACATATGCTCCGCCGTATTCACAGCCCCAACTGGCCTACTATCCCATATGCATGAGCATGGACTGCAGTCTCGCCCTTACGACTGTAACATTTGCACCGATAAATTCTTCTTCCGCGCTGAATTGGAACATCACCTGCTAGCCCATGAAATCCAAGATCCGATAGAATTACGAAATATATTAAGCAGTAACGACAAGTTCTCGTTACCAAGAGAGAGTGATAATTCCGAGCCCTATTTAACAGAGGTTAAAAAGGAAATACTTCTTCCTGATGATAAAGCGACAACAGGTGAAGAGGATGAGTACATTGAAATTGAAAATGTATCCGATGCAAATCAGATTTATAATCAGACACAGCAATCTTACATCACCCATAAGGAAAGAATACAATTGGAAGACTCGAAGCAACTATCACCACATTGA
Protein Sequence: MKLVFLILLLLQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPQALNYSPRSTGSVSSSGSFHKRRYATTLAHTDAKPTRLDYPKRPRTVNLLSCNYCSKSEFNSIEQLNVHIHTKHDKEVFSSQKTQPMAALGAAVAEPNPFQLRCEYCTMQFGNLPALFQHIRLAHVDRLASPNSYFEHFNRLAASGTFSPRLVSEKPTLREENTTKESNIKAEQNLPCSENANEEKQEEEPTDLSKNKRRSTTPVSLQEESLQPDMFFCNQCNAGLPDFEKFRSHLKTHITQGLNLICHHCGLALREQSEHERHVISHYLISNSEYICASAKCDKSYAKPEELQNHMLDQHAIPMFKCGVCSELFESKIAIQMHFACAHSVETKLLRCSVCMELFQSEREFNTHVKTRHPGLNGPVPNSLQCLFCRTVCGNDLEMHFHLAAHARQFQCPSCPETFHVEFLLDRHMQHHHTGNNRAVLSSKVSLEEASIPSNMPNQMNPLYVNALLSKAPQMPITSQNNNSSVLDYNIAFAAHLNKSLFPGSTASATPFTDDKFYNALQVDTGAVKHPGLMYGLSQRYFDTSRTLIEMYTQQRIDKPIVESYFNSPKPQSVTQHLKSQPDLHENRPPAESSNPTSVGLNSSMGYSCDICERNDFRSESEVNSHRKIVHNMKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSSAILAEHKLQHSKVGQSGKCSHCSKPLDGASAFKAHLNDHNNESQLPMQCICCRQSLHSDFEIGLHAQFHTKSSNNPESVCALCLEPIPNPMNGEAKVCEKCCRKHKLGPKFKTQRLRSEIFERDSEICRSALKTENRCNICKLMLPHTQKLQEHLVEHTFAGCEERGFNCYICSAVFTAPTGLLSHMHEHGLQSRPYDCNICTDKFFFRAELEHHLLAHEIQDPIELRNILSSNDKFSLPRESDNSEPYLTEVKKEILLPDDKATTGEEDEYIEIENVSDANQIYNQTQQSYITHKERIQLEDSKQLSPH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00081607;
90% Identity: iTF_00081607;
80% Identity: -