Basic Information

Insect: Anastrepha obliqua
Gene Symbol: -
Assembly: GCA_027943255.1
Location: JAPTHQ010000891.1:15868-19433[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0018 0.25 13.2 2.6 1 23 20 43 20 43 0.93

2 15 0.047 6.5 8.7 0.1 7 23 53 70 47 70 0.90

3 15 0.009 1.3 11.0 0.2 2 22 79 99 78 99 0.94

4 15 3.1e-05 0.0044 18.7 2.2 1 23 107 129 107 129 0.96

5 15 0.013 1.8 10.5 2.7 1 23 135 157 135 157 0.97

6 15 0.0038 0.53 12.2 4.2 1 23 163 185 163 185 0.95

7 15 1 1.4e+02 4.6 0.7 2 23 682 704 681 704 0.94

8 15 0.29 40 6.3 2.3 1 23 728 750 728 750 0.95

9 15 0.0041 0.57 12.1 1.2 1 23 758 782 758 782 0.98

10 15 0.018 2.5 10.1 2.2 2 23 787 808 786 808 0.97

11 15 3.8e-05 0.0054 18.5 0.4 1 21 822 842 822 843 0.95

12 15 0.00097 0.14 14.0 0.5 1 23 851 873 851 873 0.97

13 15 8.5e-07 0.00012 23.7 2.6 1 23 879 902 879 902 0.98

14 15 0.0001 0.014 17.1 0.9 1 23 908 930 908 930 0.98

15 15 0.00024 0.034 15.9 2.1 1 23 936 958 936 958 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0018	0.25	13.2	2.6	1	23	20	43	20	43	0.93
2	15	0.047	6.5	8.7	0.1	7	23	53	70	47	70	0.90
3	15	0.009	1.3	11.0	0.2	2	22	79	99	78	99	0.94
4	15	3.1e-05	0.0044	18.7	2.2	1	23	107	129	107	129	0.96
5	15	0.013	1.8	10.5	2.7	1	23	135	157	135	157	0.97
6	15	0.0038	0.53	12.2	4.2	1	23	163	185	163	185	0.95
7	15	1	1.4e+02	4.6	0.7	2	23	682	704	681	704	0.94
8	15	0.29	40	6.3	2.3	1	23	728	750	728	750	0.95
9	15	0.0041	0.57	12.1	1.2	1	23	758	782	758	782	0.98
10	15	0.018	2.5	10.1	2.2	2	23	787	808	786	808	0.97
11	15	3.8e-05	0.0054	18.5	0.4	1	21	822	842	822	843	0.95
12	15	0.00097	0.14	14.0	0.5	1	23	851	873	851	873	0.97
13	15	8.5e-07	0.00012	23.7	2.6	1	23	879	902	879	902	0.98
14	15	0.0001	0.014	17.1	0.9	1	23	908	930	908	930	0.98
15	15	0.00024	0.034	15.9	2.1	1	23	936	958	936	958	0.95

Sequence Information

Coding Sequence: CTAGTATCGCTAAGCGGATACGTGAAACATGTTAAAAAGCATGAGCCCCCTGGTGGATTTCTCTGTCGCTATTGTGATGCACGGTTCTGCTCCGAGGACGAATTGAAAAAGCACCGCGATAAGGTGCATACAACAATTATGTGCCGACTCTGTGCAGGAGTAACATTCACCAACGAAAGTGACTATCGCGAGCACATACGCACTGTACACAATGGCGTCGATAGGCAAATGTTGAAGTGCGATAAATGTGGAGCCGAGTATAAGACCATCTATCCATTCAAGCGTCATATGGAGACGGAATGTGGCACCATCAAGCCGTACAAATGTGATCAGTGTTCAATGAGTTTTGTGACCAAATACAATTTGAAACAGCACAAGGAGTTGCATACTGGAGAGCGAAAATTCTGCTGCAGCTATTGTGGAAAAAACTTCCTGCAAAAAGGGCGGCTAGTTGAACATGAACGTTCGCACACGGGCGAGAAACCACACAAATGTGATGTTTGCGGCAAGTGTTTTGCACATCGCGAAAGTATTGTTACTCATTCCTCGATTCACACGGGCGTCCGCCTAGTGGAATGTAAATGTTGCCTTACGCGTTTCTCGTGTCATTCCAACCTGATCAAGCATAGACGGACACGTCCGGACACATGTGGGCTACCCGAGTTCGATCCTCCTAAGCAAAGAGTGCGTACGCATCGTCTGAGAATACCGCCAACTCTCAATCCAACCTCGGAGATAAAGGTTAGCAATTCCAATCGCATAATCAAACCAGACCACAAAGAGCAAGTGCGCAAAGCGCCAATAAAGATTCTAGGTGGTGAGCCAAGACAAACGAAGTTAACCGCACGCAAAAGCACTGCTGGCAGACCAGGTCAAAAGCCAGAGGTCAGTGCAAGCAATCGCAAACGAATGCTTTCTACTACAGACACTGAGGAGGACTATGAGCTAGGCAAGGACATTTGGTATGCTGGTGGGTGTGCGGAAAGTTACGAAAAACTTGCTGAATGTGAAAGAGGGAAAGAAAAGGCAATAGATATAAAAGTTACCATAGAGCCTAGCGAAATCACTACTATTCCGCAGGCGATAAGTTTAAGCAATGGGTTAGATATTACAAAGTTAGATGAGGAATCCTCGGACGAGGATTATCCAGATTTTGATCCAGCTGAGAGCGATAGCGAAGATGAGCATAAAGATGTAGCGCTATCTGTTATGAAAATGGCAAACATAAAAGAAGAAGAATGCACGCATAATGAGAACGAAACAGAGACGCTCGCATTTGATGATGATGAGCTTGAATTTATCGCTTCTCGCGAGTTTGTTGATGCTGAGCTTGGCGTGAAATCAGAGGATGCAGGAAATATTTTTAATGAAAAAGATAAACTGCTTGACTGTTTGTTGAACGATAATGTTAATAGAAATGTCGCGCGTCGCAGCATGAAGGCGGAGCATCAAGGGCTGCACGAGACCGAACTGATATTGATTAAAGATGAAAACAGAGTAAATTATGTAGAGGAGGAAGATATACTAGATGTGCATCATCGTTCAACCTCCCCCTTTGCTGCGTGTAAAATAATGCTCCGAGACGTTTGCCAACGCTATCCCTCTCTGAAGGATGAATCAAGTGTAAAAGTATCGCGGAATGCACTCTCTTTTCCGCGTCCCATAAAAAGTCAACAGCCGCATACACGTAACGAAATTTCTAATAACGTTGACACCCAGGAATATTTAATGGAGTCACGAAAAGTGCACAAACGCATTAAAAAACTTCAGCCTTCTGCTATTGATGATGCGGCAAAGAAAGCTAAACGTGGAAGGAAACCACGCAAGCTTGTTGAAAGTAATAAAACATCAATTTCTCCCGTTGAAAATGGAGAAAACGTTTATATTGAAGATAATGTTGACGAAAATACGCTGCCAACAGACGAGCCCAACTTAAGCAAGGAACCCCACGAAGAAGGAAATAAGCCAGGTCGCATGGCTAAATTGTCACAGAAGGAACTAAAAGCGCGCTTGAAGCTACTGAAACGCGCAGAAAAGCCGTGGCAATGTCCGTATTGCATAAAAGTATATCACATACGCAAACCGTTTGAAAAACATTTGCGTGACGATCATCAAAGGCCTGAGGACGAGATTAAGGAAACCTTCAAATCAGAAGAGGGCGTCATTGATGATGGTGAAGTCTTCAAGTGCCACATCTGCTCAAAAATTTATTTGATGGAAAAGCGTTTAACCGATCATATTAAACTGCATGGTCCCGATGGTAGCTTGATTTTCAAATGTCCCTGCTATTGTTCCATATTTTTCGCTACAAAAGAAGAAGCCACTGCACATGCGCGCAAAGAGCATCGAGACTTGATATATTGCACGATTTGTGAAAAATACATGACTGGTCATGATTCACTCAAAAATCACATGAAAAAGCATGAACAGGAGAAAGACAGTAAATCGGCGGCGAAACGAAATTTCGTTTGTGACAAATGTGGTAAGAAGTTCTCAGGTCGCACCTCTCTGACCGATCACGTGCGCTCTGATTGCGGACGCCAGCCACTTTATCAGTGCAACATATGTGGCAAGCATTTAACCACAGCGGGTATATTAAAAACCCATCTGCTGCTACATAAAGACGATACGCCCTATCAGTGCGACAAATGCGGCAAAACATTCAAAGTGAAAGCCCAATACAAGACGCATATAAAAACGCGACACACCGATTTCAAGCCATTCCAGTGCCATCTTTGTCCCCGAGCATATCCTTACCGCGAGTCTCTTCTCACGCATATGACTGTGCACACGGGCATCAAACGTTTCCTATGCAATGGCTGTGGCAAGCGTTTCACCTGTGTTTCTAACTTGCAAGCGCATCGTAAAGTGCATTCGGAAACGTGTGGCCAACTGCCACTCAACGCGAAAGCGACGCAGTATATGGGCGTACAAAAGGGTAACCTTTTGTTAGGCGCAAAACCAGAAGCCGGTGTTGATTATAAGGAAACCAACACGCTCATAGCCAAGGAAGTGATTGATCGTGATCGGCCGATGGCCCAGGAAATTAACTACCCCTCAGAACCGTCAGCGCCTCTAGCCACTGTGCCACTCAACTACACTCGAACACCGACGCCACATTTACTACTTCCCCAAGTAGTAAACCAGTTCATAGATGGTGGTATTGTAGTGCCGTCTACGACTGCAGCGTATCCTTGA
Protein Sequence: LVSLSGYVKHVKKHEPPGGFLCRYCDARFCSEDELKKHRDKVHTTIMCRLCAGVTFTNESDYREHIRTVHNGVDRQMLKCDKCGAEYKTIYPFKRHMETECGTIKPYKCDQCSMSFVTKYNLKQHKELHTGERKFCCSYCGKNFLQKGRLVEHERSHTGEKPHKCDVCGKCFAHRESIVTHSSIHTGVRLVECKCCLTRFSCHSNLIKHRRTRPDTCGLPEFDPPKQRVRTHRLRIPPTLNPTSEIKVSNSNRIIKPDHKEQVRKAPIKILGGEPRQTKLTARKSTAGRPGQKPEVSASNRKRMLSTTDTEEDYELGKDIWYAGGCAESYEKLAECERGKEKAIDIKVTIEPSEITTIPQAISLSNGLDITKLDEESSDEDYPDFDPAESDSEDEHKDVALSVMKMANIKEEECTHNENETETLAFDDDELEFIASREFVDAELGVKSEDAGNIFNEKDKLLDCLLNDNVNRNVARRSMKAEHQGLHETELILIKDENRVNYVEEEDILDVHHRSTSPFAACKIMLRDVCQRYPSLKDESSVKVSRNALSFPRPIKSQQPHTRNEISNNVDTQEYLMESRKVHKRIKKLQPSAIDDAAKKAKRGRKPRKLVESNKTSISPVENGENVYIEDNVDENTLPTDEPNLSKEPHEEGNKPGRMAKLSQKELKARLKLLKRAEKPWQCPYCIKVYHIRKPFEKHLRDDHQRPEDEIKETFKSEEGVIDDGEVFKCHICSKIYLMEKRLTDHIKLHGPDGSLIFKCPCYCSIFFATKEEATAHARKEHRDLIYCTICEKYMTGHDSLKNHMKKHEQEKDSKSAAKRNFVCDKCGKKFSGRTSLTDHVRSDCGRQPLYQCNICGKHLTTAGILKTHLLLHKDDTPYQCDKCGKTFKVKAQYKTHIKTRHTDFKPFQCHLCPRAYPYRESLLTHMTVHTGIKRFLCNGCGKRFTCVSNLQAHRKVHSETCGQLPLNAKATQYMGVQKGNLLLGAKPEAGVDYKETNTLIAKEVIDRDRPMAQEINYPSEPSAPLATVPLNYTRTPTPHLLLPQVVNQFIDGGIVVPSTTAAYP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00081523;
90% Identity: iTF_00083263;
80% Identity: iTF_00083263;