Basic Information

Insect: Anastrepha fraterculus
Gene Symbol: -
Assembly: GCA_037575425.1
Location: JAYXIM010014817.1:115237-121527[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0028 0.38 12.6 0.3 2 23 71 92 70 92 0.96

2 16 0.0019 0.26 13.1 2.6 1 23 98 121 98 121 0.93

3 16 0.049 6.7 8.6 0.1 7 23 131 148 125 148 0.90

4 16 0.0094 1.3 10.9 0.2 2 22 157 177 156 177 0.94

5 16 3.3e-05 0.0045 18.6 2.2 1 23 185 207 185 207 0.96

6 16 0.013 1.8 10.4 2.7 1 23 213 235 213 235 0.97

7 16 0.004 0.55 12.1 4.2 1 23 241 263 241 263 0.95

8 16 1 1.4e+02 4.5 0.7 2 23 760 782 759 782 0.94

9 16 0.3 42 6.2 2.3 1 23 806 828 806 828 0.95

10 16 0.0043 0.59 12.0 1.2 1 23 836 860 836 860 0.98

11 16 0.018 2.5 10.0 2.2 2 23 865 886 864 886 0.97

12 16 4e-05 0.0055 18.4 0.4 1 21 900 920 900 921 0.95

13 16 0.001 0.14 13.9 0.5 1 23 929 951 929 951 0.97

14 16 8.9e-07 0.00012 23.6 2.6 1 23 957 980 957 980 0.98

15 16 0.00011 0.015 17.0 0.9 1 23 986 1008 986 1008 0.98

16 16 0.00026 0.035 15.8 2.1 1 23 1014 1036 1014 1036 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0028	0.38	12.6	0.3	2	23	71	92	70	92	0.96
2	16	0.0019	0.26	13.1	2.6	1	23	98	121	98	121	0.93
3	16	0.049	6.7	8.6	0.1	7	23	131	148	125	148	0.90
4	16	0.0094	1.3	10.9	0.2	2	22	157	177	156	177	0.94
5	16	3.3e-05	0.0045	18.6	2.2	1	23	185	207	185	207	0.96
6	16	0.013	1.8	10.4	2.7	1	23	213	235	213	235	0.97
7	16	0.004	0.55	12.1	4.2	1	23	241	263	241	263	0.95
8	16	1	1.4e+02	4.5	0.7	2	23	760	782	759	782	0.94
9	16	0.3	42	6.2	2.3	1	23	806	828	806	828	0.95
10	16	0.0043	0.59	12.0	1.2	1	23	836	860	836	860	0.98
11	16	0.018	2.5	10.0	2.2	2	23	865	886	864	886	0.97
12	16	4e-05	0.0055	18.4	0.4	1	21	900	920	900	921	0.95
13	16	0.001	0.14	13.9	0.5	1	23	929	951	929	951	0.97
14	16	8.9e-07	0.00012	23.6	2.6	1	23	957	980	957	980	0.98
15	16	0.00011	0.015	17.0	0.9	1	23	986	1008	986	1008	0.98
16	16	0.00026	0.035	15.8	2.1	1	23	1014	1036	1014	1036	0.95

Sequence Information

Coding Sequence: ATGGGCCAGAACCCAGCAAAAGCCAATACTATTAGAGATCCGAATGATTGGATTGGACATGTTCTACGCAGAGAAATTGGTGCCGCGGGCACAAAAATCAACTCATTTACCAATATGATAGATCCCGAAACACCTACTGCACAACCACCCGCCACAACAACCAAGTCGGCGATGTTGGTGCAACTGACCACCGACGGAGTACCCAAGCTGCACTGCCCCGTTTGTGATAAAGCACTGGTATCGCTAAGCGGATACGTGAAACATGTAAAAAAGCATGAGCCCCCTGGTGGCTTTCTCTGTCGCTATTGTGATGCACGGTTCTGTTCCGAGGACGAATTGAAAAAGCACCGCGATAAGGTGCATACAACAATTATGTGCCGACTCTGTGCAGGAGTAACATTCACCAACGAAAGTGACTATCGCGAGCACATACGCACTGTACACAATGGCGTCGATAGGCAAATGTTGAAGTGCGATAAATGTGGAGCCGAATATAAGACCATCTATCCATTCAAGCGTCATATGGAGACGGAATGTGGCACAATCAAGCCGTACAAGTGTGATCAGTGTTCAATGAGTTTTGTAACTAAATACAATTTGAAACAGCACAAGGAGTTGCATACTGGAGAGCGAAAATTCTGCTGCAGCTATTGTGGAAAAAACTTTCTGCAAAAAGGGCGGCTAGTTGAACATGAACGTTCGCACACTGGCGAGAAACCACACAAATGtgatGTTTGCGGCAAGTGTTTTGCACATCGCGAAAGTATTGTTACTCATTCCTCGATTCACACGGGCGTCCGCCTAGTGGAATGTAAATGTTGCCTTACGCGTTTCTCGTGTCATTCCAACCTAATCAAGCATAGACGGACACGTCCGGATACATGTGGGCTACCCGAGTTCGATCCTCCTAAGCAAAGAGTGCGTACGCATCGTCTGAGAATACCGCCAACTCTCAATCCAACCTCGGAGATAAAGGTTAGCAATTCCAATCGCATAATCAAACCAGACCACAAAGAGCAAGTGCGCAAAGCGCCAGTAAAGAGTCTAGGTGGTGAGCCAAGACAAACGAAGTTAACCGCACGCAAAAGCACTGCTGGCAGACCAGGTCAAAAGCCAGAGGTCAGTGCAAGCAATCGCAAACGAATGCTTTCTACTACAGACACTGAGGAGGACTACGAGCTAGGCAAGGACATTTGGCATGCTGGTGGGTGTGCGGAAAGTTACGAAAAACTTGCTGAATGTGAAAGAGGGAAAGAAAAGGCAATAGATATGCAAGTTACCATAGAGCCTAGCGAAATCACTACTATTCCGCAGGCGATAAGTTTAAGCAATGGGTTAGATATTACAAAGTTAGATGAGGAATCCTCGGACGAGGATTATCCAGATTTTGATCCAGCTGAGAGCGATAGCGAAGATGAGCATAAAGATGTAGCGCTATCTGTTATGAAAATGGCAaacataaaagaagaagaatgcaCACACAATGAGAATGCAACAGAGACGCTCGCATTTGATGATGATGAGCTTGAATTTATCGCTTCTCGCGAGTTTGTTGATGCTGAGCTTGGCGTGAAATCAGAGGatgcaggaaatatttttaatgaaaaagatAAACTGCTCGACTGTTTGTTGAACGACAATGTTAATAGAAATGTCGCGCATCGCAGCATGAAGGCGGAGCATCAAGGGCTGCACGAGACCGAACTGATATTGATTAAAGATGAAAACAGAGTAAATTATGTAGAGGAGGAAGATATACTAGATGTGCATCATCGTTCAACCTCCCCCATTGCTGCGTGTAAAATAATGCTCCGAGACGTTTGCCAACGCTATCCCTCTCTGAAGGATGAATCAAGTGTAAAAGTATCGCGGAATGCACTCTCTTTCCCGCGTCCCATAAAAAGTCAACAGCCGCAAACACGTAACGAAATCTCAGATAACGCTGACACCCAGGACTATTTAATGGAATCACGAAAAGTGCACAAGCGCATTAAAAAACTTCAGCCTTCTGCTATTGATGATGCGGCAAAGAGAGCTAAACGTGGAAGGAAACCACGCAAGCTTGTTGAAAGTAATAAAGCATCCATTTCTCCCGTTGAAAATGGAGAAAACGTTTATATTGAAGGTAATGTTGACGAAAATACGCTGCCAATAGACGAGCCCAACTTAAGCAAGGAACCCCACGAAGAAGGAAATAAGCCAGGTCGCATGGCTAAATTGTCACAGAAGGAATTAAAAGCGCGCTTGAAGTTACTGAAACGCGCAGAAAAGCCGTGGCAATGTCCGTATTGCATAAAAGTATATCACATACGCAAACCGTTTGAAAAACATTTGCGTGACGATCATCAAAGGCCTGAGGACGAGATTAAGGAAACTTTCAAATCAGAAGAGGGCGTCATTGATGATGGTGAAGTCTTCAAGTGCCACATCtgctcaaaaatttatttgatggAAAAGCGTTTAACCGATCATATTAAACTGCATGGTCCCGATGGCAGCTTGATTTTCAAATGTCCTTGCTATTGTTCCATATTTTTCGCTACAAAAGAAGAAGCCACTGCACATGCGCGCAAAGAACATCGAGACTTGATATATTGCACGATATGTGAAAAATACATGACTGGTCATGATTCACTCAAAAATCACATGAAAAAGCATGAACAGGAGAAAGACAGTAAATCGGCGGCGAAACGAAATTTCGTTTGTGACAAATGTGGTAAGAAGTTCTCAGGTCGCACCTCTCTGACCGATCACGTGCGCTCTGATTGCGGACGCCAGCCACTTTATCAGTGCAACATATGTGGCAAGCATTTAACCACAGCGGGTATATTAAAAACCCATCTGCTGCTACATAAAGATGATACGCCCTATCAGTGCGACAAATGCGGCAAAACATTCAAAGTGAAAGCCCAATACAAGACGCATATAAAAACGCGACACACCgatttcaagccattccagtgcCATCTTTGTCCCCGAGCATATCCTTACCGCGAATCTCTTCTCACGCATATGACTGTGCACACGGGCATCAAACGTTTCCTATGCAATGGCTGTGGCAAGCGTTTCACCTGTGTTTCTAACTTGCAAGCGCATCGTAAAGTGCATTCGGAAACGTGTGGCCAACTGCCACTCAACGCGAAAGCGACGCAATATATGGGCGTACAAAAGGGTAACCTTTTGTTAGGCGCAAAACCAGAAGCCGGTGTTGATTATAAGGAAACCAACACGCTCATAGCCAAGGAAGTGATTGATCGTGATCGGCCGATGGCCCAGGAAATTAACTACCCCTCAGAACCGTCAGCGCCTCTAGCCACTGTGCCACTCAACTACACTCGAATACCGACGCCACATTTACTACTTCCCCAAGTAGTAAACCAGTTCATAGATAGTGGTATTGTAGTGCCGTCTACGACTGCAGCGTATCCTTGA
Protein Sequence: MGQNPAKANTIRDPNDWIGHVLRREIGAAGTKINSFTNMIDPETPTAQPPATTTKSAMLVQLTTDGVPKLHCPVCDKALVSLSGYVKHVKKHEPPGGFLCRYCDARFCSEDELKKHRDKVHTTIMCRLCAGVTFTNESDYREHIRTVHNGVDRQMLKCDKCGAEYKTIYPFKRHMETECGTIKPYKCDQCSMSFVTKYNLKQHKELHTGERKFCCSYCGKNFLQKGRLVEHERSHTGEKPHKCDVCGKCFAHRESIVTHSSIHTGVRLVECKCCLTRFSCHSNLIKHRRTRPDTCGLPEFDPPKQRVRTHRLRIPPTLNPTSEIKVSNSNRIIKPDHKEQVRKAPVKSLGGEPRQTKLTARKSTAGRPGQKPEVSASNRKRMLSTTDTEEDYELGKDIWHAGGCAESYEKLAECERGKEKAIDMQVTIEPSEITTIPQAISLSNGLDITKLDEESSDEDYPDFDPAESDSEDEHKDVALSVMKMANIKEEECTHNENATETLAFDDDELEFIASREFVDAELGVKSEDAGNIFNEKDKLLDCLLNDNVNRNVAHRSMKAEHQGLHETELILIKDENRVNYVEEEDILDVHHRSTSPIAACKIMLRDVCQRYPSLKDESSVKVSRNALSFPRPIKSQQPQTRNEISDNADTQDYLMESRKVHKRIKKLQPSAIDDAAKRAKRGRKPRKLVESNKASISPVENGENVYIEGNVDENTLPIDEPNLSKEPHEEGNKPGRMAKLSQKELKARLKLLKRAEKPWQCPYCIKVYHIRKPFEKHLRDDHQRPEDEIKETFKSEEGVIDDGEVFKCHICSKIYLMEKRLTDHIKLHGPDGSLIFKCPCYCSIFFATKEEATAHARKEHRDLIYCTICEKYMTGHDSLKNHMKKHEQEKDSKSAAKRNFVCDKCGKKFSGRTSLTDHVRSDCGRQPLYQCNICGKHLTTAGILKTHLLLHKDDTPYQCDKCGKTFKVKAQYKTHIKTRHTDFKPFQCHLCPRAYPYRESLLTHMTVHTGIKRFLCNGCGKRFTCVSNLQAHRKVHSETCGQLPLNAKATQYMGVQKGNLLLGAKPEAGVDYKETNTLIAKEVIDRDRPMAQEINYPSEPSAPLATVPLNYTRIPTPHLLLPQVVNQFIDSGIVVPSTTAAYP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00083271; iTF_00082327; iTF_00083263;
90% Identity: iTF_00083263;
80% Identity: -