Basic Information

Insect: Anastrepha obliqua
Gene Symbol: -
Assembly: GCA_027943255.1
Location: JAPTHQ010000401.1:48237-53409[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.83 1.2e+02 4.8 0.1 1 17 93 109 93 110 0.87

2 12 0.25 35 6.4 1.4 1 21 215 235 215 236 0.91

3 12 2.1e-05 0.003 19.3 1.3 1 23 281 303 281 303 0.98

4 12 9.2e-07 0.00013 23.5 1.8 2 23 324 345 323 345 0.97

5 12 0.014 1.9 10.4 0.8 1 23 371 392 371 392 0.90

6 12 9e-05 0.013 17.3 1.0 1 23 398 420 398 420 0.99

7 12 0.00022 0.031 16.1 0.8 1 23 447 469 447 469 0.97

8 12 7.6e-07 0.00011 23.8 1.4 1 23 475 497 475 497 0.96

9 12 0.00024 0.033 16.0 2.2 1 23 503 525 503 525 0.98

10 12 1.5e-06 0.00022 22.8 0.9 1 23 531 553 531 553 0.99

11 12 9.7e-06 0.0014 20.3 0.1 1 23 557 579 557 579 0.98

12 12 0.00083 0.12 14.2 0.1 1 23 591 614 591 614 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.83	1.2e+02	4.8	0.1	1	17	93	109	93	110	0.87
2	12	0.25	35	6.4	1.4	1	21	215	235	215	236	0.91
3	12	2.1e-05	0.003	19.3	1.3	1	23	281	303	281	303	0.98
4	12	9.2e-07	0.00013	23.5	1.8	2	23	324	345	323	345	0.97
5	12	0.014	1.9	10.4	0.8	1	23	371	392	371	392	0.90
6	12	9e-05	0.013	17.3	1.0	1	23	398	420	398	420	0.99
7	12	0.00022	0.031	16.1	0.8	1	23	447	469	447	469	0.97
8	12	7.6e-07	0.00011	23.8	1.4	1	23	475	497	475	497	0.96
9	12	0.00024	0.033	16.0	2.2	1	23	503	525	503	525	0.98
10	12	1.5e-06	0.00022	22.8	0.9	1	23	531	553	531	553	0.99
11	12	9.7e-06	0.0014	20.3	0.1	1	23	557	579	557	579	0.98
12	12	0.00083	0.12	14.2	0.1	1	23	591	614	591	614	0.96

Sequence Information

Coding Sequence: ATGGAATTGTTACTAAGTTTGGTCATGGCCGATGTATCAAGTGCCTACGTGAAAATGGAAAATTATACACAAGTTGATGATTATGGTGGGGACATATTGGTGAAAAACGAGTACCTCGAGTATAATGAATCCATTGAGACCGGATATGAAAATGAATCGTTGATTGAATATGTTGAAGAAGAGGAGGTGCAAGATTACGACTATGTCGAAGATCATGCGAAAACGCACACGCTCACAATAAAAGCCATGCTAATAGACGGGCTACATCAAAAAGTGTATCGTTGTTTAGAATGTGATATAGATTTTGCTACAATTGAAGACTTTACTAAGGTCCATCAAGAAATGCAAAGAAAGCCTCGTCTTTACCAAACAACTGATCAAGTGGCTGATACTGAATCATTTCAGACCGAAAATTTAAGCAATGAACAACCCATTCTTGCGCACGAAGGTGAAGACTGGACAATTGTAAAAGAAGAGCCAATTGATACTAATGATAATGGAGAAAAGTATATAGAAGTTAATGAGAATATTGCAGAAAGTGCGGAGACTACTGAGGGCATCGGCGAATTGCTTTCAGAAACAGATTTACGTTACGAAGATATGGCACAAGAGATAGCCGAAGATGAGGATGATGGTGAAAAGTATTTTTGCTGTGATTGCCAAGTTGTATTTAGTGATTTGGAAAGTGCGGAGCAGCACGTTTGCAGCGCACTTAACACCGCTACATTGGATGCAGATTCAGCAGGTGGCAGTATTGCAGAGCAAAAAGGTGATGATAACATAGATTATGAAGAGCAGAGCGAGCCTTCAACAAACAAAATAGCAAGTAGTGATGCAAAGTACCATTGCCTGGAGTGTGGGAAAAATTTTAATTCCCTACAAGGTTTACAAATACACCTTCGCAGTCATAAAACCAAACAAAGAAAGACAAAGAGCAACGTGCAAGAGGTAGAGGAGTTAAAAAGCACGACATGCCCAATATGTAATACCACATTCAGATCGTATAAAAATCTTAAGTTGCACATGAAAATGCATGATGCACAACAGATGCGTACTATAGAAGAAGCATTACCCGCTGGTGCCAAAGGGCAATACAATGACATGAATAAGTTCTTTTGTGAAATTTGCAATAAGAGCTTTGAACAAAATTTACTTGGTATACATAAAAATATGCACCAACAGGCGACGGAGTACAAGTGCGGTATCTGCAATCGGGACTTTGAGAATAAAACTAGCTACGATATGCATATGCAAATGCACGCTGAAAGACCGGTGAAACCTCGTAAACAACAATTCAAAGAAGCTAATACCACTGGCAACGATAAGCGTGATGGTCGCTTTGCATGTCAATATTGCGGGCGAACCTTCCAGCGGCCATTCGAAAAAGTACGTCACGAGCGCGTGCACACTGGCGAGAAACCACATGCGTGCGAAGTGTGTGGCAAAACCTTCCGTGTATCTTATTCACTTACGCTGCATCTACGCACGCACACCGATATTCGACCATTTGTGTGTGCAACTTGCAATAAACGTTTCAAATCACAACCGGTATATGCGCATCACCTTCGCACTCACGAATCGGAGCGCGCCTACAAATGTGAAACGTGTTCGAAAACGTTTCGCACGTCGGTACAACTTGCTGCGCATCGAAATATTCATTCTAAACCATACAATTGCCCTGTATGCAATCGTCCCTTTGCTTCATTGTACGCTGTGAAAATACACATGAAAACGCATAATAAGCAAACCCGCTCCGGCGATGCTACTAAATATAGTTGCTATGTATGTGGCGCGGAATATGCGCGCATCTCTGCATTACGTTTGCATATGAAAGATTTTCACTTTATCGATTTTGATACGAATCAGTCGTTAGAGTTAGACGATGAAGTGATTTCGGCCGATGAACAAAATGCACAAGAAAACGAAGATGAACATGAGGTGGATCACGAGGCTGCTGTGTTGATAGCAGCGGCTGCAGAAGCCGACTGTGCGGCTTACATGGAAACTGTAACAGCTCAAGCTCCAGATGTATACGAGGTGGCGCAACAAAATGACGAGCTGATTGTGGACAACTACCAAACGGAGGAGATTGTGTCTGATTGGCTATCGAAGTAA
Protein Sequence: MELLLSLVMADVSSAYVKMENYTQVDDYGGDILVKNEYLEYNESIETGYENESLIEYVEEEEVQDYDYVEDHAKTHTLTIKAMLIDGLHQKVYRCLECDIDFATIEDFTKVHQEMQRKPRLYQTTDQVADTESFQTENLSNEQPILAHEGEDWTIVKEEPIDTNDNGEKYIEVNENIAESAETTEGIGELLSETDLRYEDMAQEIAEDEDDGEKYFCCDCQVVFSDLESAEQHVCSALNTATLDADSAGGSIAEQKGDDNIDYEEQSEPSTNKIASSDAKYHCLECGKNFNSLQGLQIHLRSHKTKQRKTKSNVQEVEELKSTTCPICNTTFRSYKNLKLHMKMHDAQQMRTIEEALPAGAKGQYNDMNKFFCEICNKSFEQNLLGIHKNMHQQATEYKCGICNRDFENKTSYDMHMQMHAERPVKPRKQQFKEANTTGNDKRDGRFACQYCGRTFQRPFEKVRHERVHTGEKPHACEVCGKTFRVSYSLTLHLRTHTDIRPFVCATCNKRFKSQPVYAHHLRTHESERAYKCETCSKTFRTSVQLAAHRNIHSKPYNCPVCNRPFASLYAVKIHMKTHNKQTRSGDATKYSCYVCGAEYARISALRLHMKDFHFIDFDTNQSLELDDEVISADEQNAQENEDEHEVDHEAAVLIAAAAEADCAAYMETVTAQAPDVYEVAQQNDELIVDNYQTEEIVSDWLSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00082319;
90% Identity: iTF_00082319;
80% Identity: -