Aobl032482.1
Basic Information
- Insect
- Anastrepha obliqua
- Gene Symbol
- DMRT2
- Assembly
- GCA_027943255.1
- Location
- JAPTHQ010000263.1:1392988-1400132[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.031 4.8e+02 2.1 0.7 2 21 6 25 5 27 0.91 2 2 6.3e-24 9.9e-20 71.5 16.3 1 47 66 112 66 112 0.99
Sequence Information
- Coding Sequence
- ATGCCCGGACAATATACGCCAGCATGCTCACCATGTCTATCGGAGCAATCAGTGTCCCATCGCAAACACCACAACGTAACTCCGCCACCGCAATCACAAGCCTCGAATTTATCTAACTCCCGCTCTTCCCCTTCCTACTCTTCTTCATCAAATACATCACCAACACCGGCACCGCCTAAGGAGTCACGTATGTTACGTACCCCAAAATGTGCACGATGCCGCAACCATGGCGTCATCTCTTGTGTCAAGGGTCACAAAAAGCTTTGCCGCTGGCGCGAATGTTGCTGTCCCAACTGTCAGTTGGTTGTCGATCGTCAGCGTGTGATGGCCGCCCAAGTAGCATTGCGGCGTCAGCAATCTATGGAAGCTTTAGAGGCGCAAGCGAGTGGACAAAGCGCTCTAAGCGAAGGTGCTACTACAACAACAAGAACTCCGTCATTCAATTCTAACGAGTGTAAGACAAGTTCCAACTCTTTCCGCACGAAACAGGCACTAATCGCCCAGAAAAAAATCTACAAGCATCGCTTGCGTACGCTGCAACAAACAACGCTACATATAACCGCTGCCATAGAAGAATACAAGCAACGTTTTCCCACCATCAACTCACCGTTACTGGAGCGTATCCGTAAGAGACGCGCCTTTGCCGACCCCGAACTGAATTGGGTAAATCTCGATACAGCAGCGTTATTGAACACATCGACGCCTTTGACATCATTTCACACCGCTGACGTACCCCAACCGCCCATCGCTATGTCAGATGCTCTTCCACTTGGTGTACCCAACGCTTTTTTGTGTTCGCCACCACTGCCGCCTTTCTTTGTCACGCCTACTTTGTTCTCTTCTTCTGCGTCTGATGCATTTTCCTATGGTAGTGACTTTGAGAATTATTCTTTGGTGGCGCAATCCTCTTGCCCTGGTAATGTGGATGTGTCCATCCAGAGCGTCAACCCATTGTCAACTTCCTTACCAAAAGAGACAACAACAAGTGCGATTTGCTCGCAAGAACAAATACAAACCTTTAGAGCTACAACTGAAGAATTAATTACGCCCATTAAAAAACCAAAACTTAACTTTTCAATAGAATCTATTATTGGTGTTAGTATATAA
- Protein Sequence
- MPGQYTPACSPCLSEQSVSHRKHHNVTPPPQSQASNLSNSRSSPSYSSSSNTSPTPAPPKESRMLRTPKCARCRNHGVISCVKGHKKLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQSMEALEAQASGQSALSEGATTTTRTPSFNSNECKTSSNSFRTKQALIAQKKIYKHRLRTLQQTTLHITAAIEEYKQRFPTINSPLLERIRKRRAFADPELNWVNLDTAALLNTSTPLTSFHTADVPQPPIAMSDALPLGVPNAFLCSPPLPPFFVTPTLFSSSASDAFSYGSDFENYSLVAQSSCPGNVDVSIQSVNPLSTSLPKETTTSAICSQEQIQTFRATTEELITPIKKPKLNFSIESIIGVSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00081249;
- 90% Identity
- iTF_00081249;
- 80% Identity
- -