Alud034870.2
Basic Information
- Insect
- Anastrepha ludens
- Gene Symbol
- TIGD6
- Assembly
- GCA_028408465.1
- Location
- JAPVRI010125642.1:261-2099[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-09 3.7e-06 28.0 0.0 5 37 1 33 1 35 0.95
Sequence Information
- Coding Sequence
- ATGATAGAGGCGATTTCTGCGGTAAAGACCAAGAAAATGGGATTCCTGAAGGCGTCCAAGGAATATAAAGTACCCAAAACTACATTGCGGCGTTTTTTTGCTGATGATAGACAACCTGTTGAGGAAGTAGTGTCAGCTAAGCTAGGAAGGAAACTGGTTTTGCCTCCAGAACTGGAAGATTCACTTGTCGAATATATATTGCTCATGGAGGCGAAATTGTTCGGGTTAACGCGGAATGACATAAGACCCTTAACTTTTCAAGTGGCGCTAAAAAACGATTTACCTAACCCCTTTTCTATAGCGAAGAAAACAGCGGGAAGAGATTGGTTGCGTTGGTTTCTAAAACGCCACCCTTCTTTATCGTTCCGCCAACCATCCAGTACATCTGTAGCTCGAGCTAAGGGATTTTCCCGAGAAAATGTGCCAATTTTTTTCGATCTGCTGCAAAAGAAGATGGAAACATATAAATTTTCCcctaataatatatttaatgtgGATGAAACTGGAATATCAGTAGTTCTTACGAAACTGCCGAAGGTTTTGGCTCTGAAAGGTCGAAAGCAAATTCGTGCTCTGGATTCAGCTGAAAGAGGATCTTTAATTACAGCGATTTTGTGTATGAGTGCAGGTGGATCCTTCATACCACCCGTGTTCATTTTTCCTAGAAAAAGGGATAATCCCCTTCTAATGAACAGAGCACCTCCTGGATCCATACATGCTAATCATCCCTCGGGATGGGTTCAAACCAACTTGTTCACCAAATGGTTCAAGCACTTCCTATCAGTAGTTAAACCTTCAGAAGCATCTCCGGTATTACTTATTTTAGACGGACATGCAAGCCATACCAGAAATATTGAAATCATAGAGCTAGCTAGGGAAAACCACGTTCGCATTTTCTCGATTCCCTCACACTCAAATCACCAAATTCAACCCCTGGACAAAACTTTTATGGGacccttgaaaaaatatttgacagaGGAAATCAGATGTTGGCTCTTAACTAATGTAAAAGCGTTGACACATTATGACATTATTGAATTATTTGGTCGAGCTTACATGAAAGCTCAAAGTGGTGAACTTGCTGTcaaagggttttcttcaacggGAATACACCCCTTCAATAGTCAAATATTTAACGATCATGATTTTTTGGCTTCAGAAGAAGTTGAGGCACCAATAGAAAGCGTGGAGAATTATAATCAGGTTTCTGTATCACCTATACACAATCAATTGCCCGAACCACACCAAAATACTGATATAGAGGAACCTATTTCCTTCGAACCGTCTACATCCTCTGGTGCAAAGTCAAGCTCCTTCATATTGCCTCAAGAGATTTCCCCTATTCCGGTCCGTATCAAGAAAACAACAAATCGAGGACGAAAACCAGGAAAAGCAGAAATCATTTCATCTTCACCATACAAACAGGCGTTGGAAGAATCGTTGAAGAAAATAAAGGGCAAAAAACATGTCAAGAAAAGCAAGCTTAAAcctgaaaaatgcaataaaaagggAAAGACTTTAAAAAAGAAGaAGAATTACCAGCATGAAGATGAAACATCTTCATCAGAAAGCGAAAATTTAATCTTATCTCATTCACCAGATCTTAGTCCAGATAGATCTAATCAAGAAGACGCCAAATGTATCTATTGTTCCTGTTTATTTTCGGATGACAAGGGCGGAGAGTCATGGTTGCAATGCGTTGTATGCACAATGTGGGCACATGAACTTTGTTCAGGAAACgagaaagaatattttatttgcgaATTTTGCTGCTCATAA
- Protein Sequence
- MIEAISAVKTKKMGFLKASKEYKVPKTTLRRFFADDRQPVEEVVSAKLGRKLVLPPELEDSLVEYILLMEAKLFGLTRNDIRPLTFQVALKNDLPNPFSIAKKTAGRDWLRWFLKRHPSLSFRQPSSTSVARAKGFSRENVPIFFDLLQKKMETYKFSPNNIFNVDETGISVVLTKLPKVLALKGRKQIRALDSAERGSLITAILCMSAGGSFIPPVFIFPRKRDNPLLMNRAPPGSIHANHPSGWVQTNLFTKWFKHFLSVVKPSEASPVLLILDGHASHTRNIEIIELARENHVRIFSIPSHSNHQIQPLDKTFMGPLKKYLTEEIRCWLLTNVKALTHYDIIELFGRAYMKAQSGELAVKGFSSTGIHPFNSQIFNDHDFLASEEVEAPIESVENYNQVSVSPIHNQLPEPHQNTDIEEPISFEPSTSSGAKSSSFILPQEISPIPVRIKKTTNRGRKPGKAEIISSSPYKQALEESLKKIKGKKHVKKSKLKPEKCNKKGKTLKKKKNYQHEDETSSSESENLILSHSPDLSPDRSNQEDAKCIYCSCLFSDDKGGESWLQCVVCTMWAHELCSGNEKEYFICEFCCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00992493; iTF_01505312; iTF_01505316; iTF_01505317; iTF_01505309; iTF_01505310; iTF_01505311;
- 90% Identity
- -
- 80% Identity
- -