Basic Information

Insect: Anastrepha fraterculus
Gene Symbol: -
Assembly: GCA_037575425.1
Location: JAYXIM010037216.1:77289-79060[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00075 0.1 14.3 5.3 1 23 239 262 239 262 0.98

2 8 5.5e-06 0.00075 21.1 0.4 3 23 267 287 265 287 0.96

3 8 4.8e-06 0.00066 21.3 2.2 1 23 291 314 291 314 0.96

4 8 0.0001 0.014 17.1 0.2 2 23 321 342 320 342 0.95

5 8 1.1e-06 0.00015 23.3 3.6 1 23 348 370 348 370 0.98

6 8 1.8e-05 0.0024 19.5 0.4 1 23 374 396 374 396 0.96

7 8 2e-05 0.0027 19.3 1.8 1 23 402 424 402 424 0.96

8 8 0.54 74 5.4 3.9 1 12 430 441 430 453 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00075	0.1	14.3	5.3	1	23	239	262	239	262	0.98
2	8	5.5e-06	0.00075	21.1	0.4	3	23	267	287	265	287	0.96
3	8	4.8e-06	0.00066	21.3	2.2	1	23	291	314	291	314	0.96
4	8	0.0001	0.014	17.1	0.2	2	23	321	342	320	342	0.95
5	8	1.1e-06	0.00015	23.3	3.6	1	23	348	370	348	370	0.98
6	8	1.8e-05	0.0024	19.5	0.4	1	23	374	396	374	396	0.96
7	8	2e-05	0.0027	19.3	1.8	1	23	402	424	402	424	0.96
8	8	0.54	74	5.4	3.9	1	12	430	441	430	453	0.83

Sequence Information

Coding Sequence: ATGGACTTCAAATGGAAAAGTTGGTGTCGCCTGTGTGCTAGAGCTGATACACAATACATCAATGTCATTTCCGGACAGTGTCAGCAACTTGTGCCAAAAACTAATGAAtacagtagtagtagtagttgtAGTATTGCCCCTGTCATAGAGGATTTCTTTCGGATTCACATTAAAGATGATGAAAAACTCTCGCAGCTGGTTTGTATAGAATGTTACCAACTGGTAAATTCCTTGATAAGGTTTAGAGAGCGAGTAAATAAAGTTCAGCAAATGTACGACGATCTACAAAATCATGTATACATAGGCAAACTTAACTCAAAAgctttgtttgaaaaatatgacTTAATTGAAAATGCACCATTTTTTTCACCTAATGACAGTAAACTGCCTGTTGAAGAAATTTTCATTGCTGATTTGCCTGTCACAACTATATCACAATCATCAGGAATTGAtgtaaaaagtgaaaagaaatcGGATGAGGTGCAAACGGATATATTTTTACAAGAGTACACAAAGAAGGGAGAATTTATTGATCCGATCGGTGATGAAAAAGGTAGTTCTGACAAAGATTATTCTCCGATAGCCCATGACGAAGATACCAGCGATAATGAAGATAGTGATATAGAGTTAGAGTCTAAAAATAACGAATCGGAAAAGGTTACACAAAAATCAGAGGACTCCTCGAATGTACACAATCAGGACCTGGAATGTAgctattattgcaaaatttgctCTCAAAGTTTTCAACGTATCAGGCACTATACTCTTCATATGAAAACGAGACATGGAGACATAATATGTCCCCAGTGTccgaaatcattcaaaaacgcattaaaattaaGGCAACATATGAAAGACCACCCAAGAACGTTTTCCTGTTTACATTGcgataaaaaattcgaaacaaaAGTAAGTTTAGCAAAACATATAAGATGGACACATGAAGATGAGCAACCACTTATTTGTGAAGTATGTGGGGCGACTTTACGCACGAAAAAACAACTCAGAGAACATATGTTGCAACACACTGATTATTCGCCATTTGAATGCAAAGTTTGCGGTACTTGTTTCAAAGTAAAAAGTCGTCTGAAGagGCACATGCAAATACATGGAGACAAGCATATTTGCCCTGAATGTGGTAAACAACTGAGTACGCGAGCTACGCTCAAAAGTCATTTGTTGGTGCATTCCGATAAGATGTCACATAAATGTGACTATTGTGGCCGGTTGTTTAAACGCGCAAATACACTGAAAAACCACTTAATTGCCCACACGGATCTCAGACCTTATTCATGTGACTTTTGTGATAAACGGTTTTCAACTGGGCCTAGTTGTCGTTTTCACAAAAGAACAATGCATCCAAAGGAACTAGCTGAACTAGAAGCGTCGGGTGCTAAAGCATATACCAAAAATATACCTACTTTGAACGTACTAAAGGCGGTGTCAAGGACAGGTACAAATTTCAAGCCTCTAGCATCAAAACAGAATGGTTTTGCACATTTCGACAAGGAAGTACAAATTACACCTGAAGTTGTGAACTCAAatccaacaaaatattataaatcagatttattataa
Protein Sequence: MDFKWKSWCRLCARADTQYINVISGQCQQLVPKTNEYSSSSSCSIAPVIEDFFRIHIKDDEKLSQLVCIECYQLVNSLIRFRERVNKVQQMYDDLQNHVYIGKLNSKALFEKYDLIENAPFFSPNDSKLPVEEIFIADLPVTTISQSSGIDVKSEKKSDEVQTDIFLQEYTKKGEFIDPIGDEKGSSDKDYSPIAHDEDTSDNEDSDIELESKNNESEKVTQKSEDSSNVHNQDLECSYYCKICSQSFQRIRHYTLHMKTRHGDIICPQCPKSFKNALKLRQHMKDHPRTFSCLHCDKKFETKVSLAKHIRWTHEDEQPLICEVCGATLRTKKQLREHMLQHTDYSPFECKVCGTCFKVKSRLKRHMQIHGDKHICPECGKQLSTRATLKSHLLVHSDKMSHKCDYCGRLFKRANTLKNHLIAHTDLRPYSCDFCDKRFSTGPSCRFHKRTMHPKELAELEASGAKAYTKNIPTLNVLKAVSRTGTNFKPLASKQNGFAHFDKEVQITPEVVNSNPTKYYKSDLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00083311;
90% Identity: iTF_00083311; iTF_00082361; iTF_00082368;
80% Identity: -