Basic Information

Insect: Anastrepha fraterculus
Gene Symbol: -
Assembly: GCA_037575425.1
Location: JAYXIM010045725.1:65847-68533[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.063 8.7 8.3 2.9 1 23 126 149 126 150 0.94

2 13 0.0025 0.35 12.7 1.5 2 23 155 177 154 177 0.91

3 13 3.4e-06 0.00047 21.7 5.4 2 23 187 209 186 210 0.96

4 13 0.00052 0.072 14.8 11.5 2 23 421 442 421 442 0.98

5 13 2.1e-06 0.00029 22.4 3.5 1 23 448 471 448 471 0.94

6 13 0.0027 0.37 12.6 0.7 1 23 476 499 476 499 0.95

7 13 0.021 2.9 9.8 6.9 1 23 509 531 509 531 0.96

8 13 0.035 4.9 9.1 2.1 1 23 536 558 536 559 0.94

9 13 2.6e-07 3.6e-05 25.2 0.4 1 23 565 587 565 587 0.96

10 13 1e-05 0.0014 20.3 0.5 1 23 593 615 593 615 0.98

11 13 9.7e-07 0.00013 23.4 1.7 3 23 623 643 622 643 0.99

12 13 9.6e-08 1.3e-05 26.6 0.2 1 23 649 671 649 671 0.99

13 13 0.065 9 8.2 0.1 1 23 676 699 676 699 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.063	8.7	8.3	2.9	1	23	126	149	126	150	0.94
2	13	0.0025	0.35	12.7	1.5	2	23	155	177	154	177	0.91
3	13	3.4e-06	0.00047	21.7	5.4	2	23	187	209	186	210	0.96
4	13	0.00052	0.072	14.8	11.5	2	23	421	442	421	442	0.98
5	13	2.1e-06	0.00029	22.4	3.5	1	23	448	471	448	471	0.94
6	13	0.0027	0.37	12.6	0.7	1	23	476	499	476	499	0.95
7	13	0.021	2.9	9.8	6.9	1	23	509	531	509	531	0.96
8	13	0.035	4.9	9.1	2.1	1	23	536	558	536	559	0.94
9	13	2.6e-07	3.6e-05	25.2	0.4	1	23	565	587	565	587	0.96
10	13	1e-05	0.0014	20.3	0.5	1	23	593	615	593	615	0.98
11	13	9.7e-07	0.00013	23.4	1.7	3	23	623	643	622	643	0.99
12	13	9.6e-08	1.3e-05	26.6	0.2	1	23	649	671	649	671	0.99
13	13	0.065	9	8.2	0.1	1	23	676	699	676	699	0.92

Sequence Information

Coding Sequence: ATGGAAACCATTAGTTCAGGAGCCGATGTCCCGAACTCTGACCGCATTTGCCGAGTTTGCTTGCAAGGAAATGTTGAATTGTTTTCTATCTTCCAAGAAACTCATATCAGTGGGGTAACTGTAGCACATATCTTATCAGAATGCACGAGATATCCTGTAATAGCGGCCGATCTTAAATTACCGCAACAAATCTGCACTTGTTGTATTGGAAACGCCCGTGTTGCCTATGAATTCAAACATCGTGTAGAACAGTCTTACAATTCATTAATGGGGTGGGCAGAAGAGAAATTTCTGTGTAATACAAAAGTTTGTTCGCCAGTCGTCACTCCCAGTGAGCGAAGAGAATATGGTACACAGACTGATATACTCAGTTTACATCCATGTGAAATGTGCGAAATGaagttttttgatttattggaGCTCCGGCAGCACCGCAAGCAAATTCATCATAATAGTAATTTGCAGTGTCGAATCTGTGGTATACGCTTCGAACGCATGAGGCAATTGCGAAGCCATTTGGTCCACAAACACCCAAGTGTTGGTATTGCATTGGATATTCAGTGCACAATATGCCGCAGACGCTTTTCACGCAGGGAACATTTAAATCGTCACATGCGTAACGTACACCATCAACCCGAGGCGACAAGCACTAGGGTCTCTCTCAAGGAACCAGAAATCGAgcttacaagccatttagtcaAAAAAGGGCAGCAAtctacaaaaaaaggaaatgagGCGAAAATGGACGTGCCAGGAATTGACTTGAAGTCGGAGAAGAAATTGAGTGCTGTAGACAACGACAGCTTTCTAGGACCTTCTCATTTTCTTGAATGTGGGCAGGATATGGCTGGGGAGGTTGAAAGCGACATTAACATGGATACTAATCCTATTTCGAGCGATGATGAAGCCTACGACGGAATGGAAATTCCGGATGACATATTACCTAAGTTAAAATTAGAGCACGAGCCTGATATTAaggTTAAGTGCGAAGTCGACGTTTCTGTGGATGGTTTCGATATAACAATAATGTCGCCCGATTGGGACCAAAGTAAATCGCCAGCTTCTAATAATGTCATTAAAGAAGAACGTGAATTGTTGGTTCCTTTGAGCATACAAAAGTCATCTGCCTTTAAGGGGAAATCGTTCACAAATGGAAGGGAGGAGGAGGAAGACGCCGCAGAACGTCGGCGTATTACCGAAGTTGTTGATGAGTTTCTCGCCCAGAATTCTGCAGTTGATGAAACAGCTAATGCAGAAAACCGTTGCACAAAGTGTCAACGgactttttcaagacattgTCATCTACGACGTCACATGTTGACACATGTTGAGGAAAAGGGACATGCATGCACGTACTGCCCGAAACGTTTCGCACGAagtgatcatttaaaaaaacacattatgAACTTGCATCAAACGAAGGAATTCAAATGTGATCAATGTAGTAGTGCATTCGCGCGTTTAGTAGAATTAACAAAACACAAAGACTCTCGACATGGAAGCGATCCCCAAGCCCATAAGGTGCACGATTGCGAGTATTGTTGCAAAAAGTTTACAAGTCGAACATATCTTCGCAAACATGTTTTAATGCATACTGATCGTATTTTCGCCTGCAAGTTTTGCGATGATACATTTAAAGAACGGAAAGCTCTCCGTGAACATGAGAAGGGTCATCACAGTGACCGAAGGAATTTCCTATGTTCAGTTTGCGGAGAAAGTTTCGTAAGAAACGATTATCTACGTGTCCATATGCGTCGTCATAATGGCGAAAAGCCATACAAATGCCAATATTGTGGAAAAGGCTTTCCACGCGCAACTGATGTTAAAATACACGAAAGGTATCACACAGGCACTAAACCTAATTTGTGCAATCTATGTGGCAAGGGTTTCCATCGCGCCTATAACCTCACCATTCATATGCGCACTCATACCGGCGAGCGACCTTTTAAATGTGAAGAGTGCGGACGAGGATTTGCCCAAAGCAATGATTTGAAAGCTCATATTCGGCGACACACTGGTGAACGTTTCAAATGTTCTGAATGTGATGCCGGTTTTTTGCAAATGTATGCACTGCGACAACATGCACAGGCGATACATGGCATACATATGGAACCGGCAACAGGGCGTTTACAAAGATTTGCCCCTTCTGAAACTGCTGTAGCGGTTGGAGAAACACTTCAACCAACAAACAATATACATCAGCCTTTGGCAGAACATATGCAATTGATGCAGCAGCAACATCAACCACAGAATTTTTCAGAACCACAAATTTCAAATAGTACACTAATGCCGCCGCCATCTTCGTCAGTGTAA
Protein Sequence: METISSGADVPNSDRICRVCLQGNVELFSIFQETHISGVTVAHILSECTRYPVIAADLKLPQQICTCCIGNARVAYEFKHRVEQSYNSLMGWAEEKFLCNTKVCSPVVTPSERREYGTQTDILSLHPCEMCEMKFFDLLELRQHRKQIHHNSNLQCRICGIRFERMRQLRSHLVHKHPSVGIALDIQCTICRRRFSRREHLNRHMRNVHHQPEATSTRVSLKEPEIELTSHLVKKGQQSTKKGNEAKMDVPGIDLKSEKKLSAVDNDSFLGPSHFLECGQDMAGEVESDINMDTNPISSDDEAYDGMEIPDDILPKLKLEHEPDIKVKCEVDVSVDGFDITIMSPDWDQSKSPASNNVIKEERELLVPLSIQKSSAFKGKSFTNGREEEEDAAERRRITEVVDEFLAQNSAVDETANAENRCTKCQRTFSRHCHLRRHMLTHVEEKGHACTYCPKRFARSDHLKKHIMNLHQTKEFKCDQCSSAFARLVELTKHKDSRHGSDPQAHKVHDCEYCCKKFTSRTYLRKHVLMHTDRIFACKFCDDTFKERKALREHEKGHHSDRRNFLCSVCGESFVRNDYLRVHMRRHNGEKPYKCQYCGKGFPRATDVKIHERYHTGTKPNLCNLCGKGFHRAYNLTIHMRTHTGERPFKCEECGRGFAQSNDLKAHIRRHTGERFKCSECDAGFLQMYALRQHAQAIHGIHMEPATGRLQRFAPSETAVAVGETLQPTNNIHQPLAEHMQLMQQQHQPQNFSEPQISNSTLMPPPSSSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00081511;
90% Identity: iTF_00081511;
80% Identity: -