Afra015521.1
Basic Information
- Insect
- Anastrepha fraterculus
- Gene Symbol
- dmrta2
- Assembly
- GCA_037575425.1
- Location
- JAYXIM010020049.1:487462-496279[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-18 1.2e-14 55.2 3.8 15 47 2 34 1 34 0.96 2 2 4 4.5e+04 -12.4 9.4 11 22 282 293 279 298 0.55
Sequence Information
- Coding Sequence
- GTTAGCGCCCTGAAAGGACACAAACGTTATTGCCGTTGGCGAGATTGTGTTTGTGCGAAATGCACTTTGATTGCCGAACGACAACGCGTCATGGCCGCACAGGTCGCGCTGCGTCGCCAACAAGCGCAAGAGGAGAACGAGGCACGCGAATTGGGTCTACTCTACACTAATGTGCCACCTGGGCAACAGAATGGTGTTGAAGGCGGAGGCGGCGGCGGTGGCGTTCCACCAAATCAACACAGCCCTCCGCCGCCGTTGACAAATGCCGCCGCAGCCTTTCATCCCGGCATTCCCTCACCGCCCAGCGACGGCTTGGACACCAGCAACGGTCAACGCATGCAATACAATGGCAATGAATCAGATACAGATGTGCGAATGCGCTCTTCGGAACGTCTTTCGATGGGCTATTCGCCTGATCGCAGCACCGAAGTGGAGAGTCCAGGCTCTAAGCGTGCCCGTCTCTCTAACGAGACCGATCAAGATACCGGTTCTGAGTCCTCGCCCAGCAGTCCCCGCATGAAGGGTCGCAACTACAATGACAGCGGCAATCTATCACCCACACGCACCGGACCACCCAGCTCACCCGAGTCCGATCTCGATGTTGACTCTGCGCCCGATGAAGCAACACCCGAAAATCTCAGTCTGAAAAAGGAAGATTCAACATCACCGCCAAACACGCCCACTGACAATTTACATTTGCTGCGCACTTTCAATAATGGCGCAGCACAAGGTTTCATTCCATATCACCACCCGCAGTTCCTTGCTGCTGCCATGCCTGCTGCCGCCGCCGCTGCTGCCGTCGGTGTACATCCACACAATCAACATTCACCGCATGCACAACATCATCAGCACCAGCATCAGCAtcatcaacatcaacatcacacacagcagcagcaacaacagcaacatgcgCTGCCACTAGCTATGGTTCAGCAGCAAATGCAGGcgacacaacagcaacaacgttCACCCGTCGATGTACTGCTACGCGTATTTCCCAATCGTCGTCGCAGTGATGTTGAGCAGTTGCTGGCGCGCTATCGTGGCGATGTACTCCAAGCCATGGAGGCAATGCTCTCCGGCGAGGATATGACGCAGGCGCTCGCCTCAGCGGCGGTGGCAGCAGCTGCTGCATCGGCCGCAGCTTCGCCACCCAATGTGCCGCCATCGCCGCCCTTCCCGCTCAAGTCGGCCTTCTCGCCGCTAGTGCCACCCGCCGCAGTTTTTGGTTCGCCCACACATCGTTACCCGCCCTTCATGCAGGCGCATGCGAAGCGTTTCCTTGCCGGGCCCTACGCTGGTGCTGCTTATCTGCCCGGCGTGCTGCCACCCGATGTTATCGATCAGGCAGAGTCAAATGGTGGTACGTCGATGGATCGCAATAGCAACGCCGGCGATTCGCAAGATTGA
- Protein Sequence
- VSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGLLYTNVPPGQQNGVEGGGGGGGVPPNQHSPPPPLTNAAAAFHPGIPSPPSDGLDTSNGQRMQYNGNESDTDVRMRSSERLSMGYSPDRSTEVESPGSKRARLSNETDQDTGSESSPSSPRMKGRNYNDSGNLSPTRTGPPSSPESDLDVDSAPDEATPENLSLKKEDSTSPPNTPTDNLHLLRTFNNGAAQGFIPYHHPQFLAAAMPAAAAAAAVGVHPHNQHSPHAQHHQHQHQHHQHQHHTQQQQQQQHALPLAMVQQQMQATQQQQRSPVDVLLRVFPNRRRSDVEQLLARYRGDVLQAMEAMLSGEDMTQALASAAVAAAAASAAASPPNVPPSPPFPLKSAFSPLVPPAAVFGSPTHRYPPFMQAHAKRFLAGPYAGAAYLPGVLPPDVIDQAESNGGTSMDRNSNAGDSQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01505424;
- 90% Identity
- iTF_00082968;
- 80% Identity
- -