Adis032486.1
Basic Information
- Insect
- Anastatus disparis
- Gene Symbol
- -
- Assembly
- GCA_017163975.1
- Location
- JAFFSR010000220.1:13474551-13481093[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00013 0.045 16.8 1.4 1 23 421 443 421 443 0.96 2 18 2.2e-05 0.0075 19.2 1.9 1 20 449 468 449 471 0.94 3 18 4.4e-05 0.015 18.3 0.7 1 23 477 499 477 499 0.98 4 18 0.00011 0.036 17.0 4.4 1 21 505 525 505 527 0.95 5 18 3.3e-05 0.011 18.7 4.6 1 23 533 555 533 555 0.99 6 18 3.3e-05 0.011 18.7 5.3 1 23 561 583 561 583 0.97 7 18 1.3e-05 0.0043 20.0 7.1 1 23 589 611 589 611 0.97 8 18 1.2e-07 4.2e-05 26.3 2.7 1 23 617 639 617 639 0.98 9 18 9.1e-05 0.031 17.3 6.7 1 23 645 667 645 667 0.97 10 18 2.8e-05 0.0096 18.9 5.8 1 23 673 695 673 695 0.98 11 18 7.5e-07 0.00025 23.8 2.9 1 23 701 723 701 723 0.98 12 18 1.1e-05 0.0038 20.1 7.8 1 23 729 751 729 751 0.98 13 18 3.5e-05 0.012 18.6 9.1 1 23 757 779 757 779 0.98 14 18 4.6e-05 0.016 18.2 7.5 1 23 785 807 785 807 0.98 15 18 0.0013 0.44 13.6 8.8 1 21 813 833 813 835 0.94 16 18 1.7e-05 0.0057 19.6 0.4 1 23 841 863 841 863 0.98 17 18 0.04 14 8.9 4.5 1 23 873 895 873 895 0.98 18 18 6.5e-07 0.00022 24.0 1.3 1 23 901 923 901 923 0.97
Sequence Information
- Coding Sequence
- atgaatactgAGCAACATGCTCTGCCAGCGACAACGCAGGCACAACAAGAAGAAGTAAACGCAGGTCAAAGTGGTCGCCCTGCATATCCAGGTGGTCTCGCAACTTCGACAAGTATTGGCAATGTAGGAAATATCCCACATTCATCTGCAGACCTGCGAGTAGGTACAGCTGTAGCATTAGCTTCTTCAGTAGCTAAATACTGGTTTCTTACCAATCTAATACCTGGGCCAATACCTCAGGTATCTGTGTATCACCCACATCATAGAAGTGGTACAGTAGGAGGTGAGAACCAGACTACCAAAGATTCTACAAGCTTATTAAACCAAGATATGTCATTGACTACTGGTACTCAAAATCAGACATCAGCTTCACATCATCAGTCATCGTTCACTGTACAGattccaGTTTCCCTTCCAGGACTTAGCTTAGATGGAAGTCATCTTCAGGCAAGTGTGAGTCATTTACAAGCAGCGCATGCTCAAATGCAACAGCAAATGCAAACTCAACAAGCACAATTAcatcaacaacaacaacaacaacaacaacaacaagcTCAGGCTCATCATCAAATGCAAAGTCATCAGAATGCTCAAAGTGCAGCTCAAAccaatcaaaatcaaaattcatcTAGAGAAAACAAGTCCAAAGAGGATCAATCAGATCGATGCAACGATAACCAAGTACATTCTCATGTTCCATGTGATCATCAACATCAACAAGCACAGGATTTACAACAAAGCCTAATGCATCAACAACAACAGATTGGTGTCAATATTGGAGGTGCCTCCACTGCGGATGGTGCTAATTCTAGTGGAGTGGAAAAAgttgaaaagaaagaagataTACGTCAGTTAAATATGACACAgTTTCAAATACCCGACCTAAAAGCAGCGAGTCACATGATGGACGTTCGAACTGCAGATGGATCGATTGTAAAAATAAGTGCACCAAATGATCAGGACCTTGCAAAAACATTAGGTGTTGATATATCTCAATATATAAATAagGGAGCTGGTAATGTTGAAGAATTGAACCAGATAAATCAATTGTTATTATATCACGAAGTATTTGGTAAATTACAAAGTGAAATAGCTACAGGTACAACGCTAATAAATAGTACCATACCAACGCAAACAGTCACGACAATACAAAATGGAGCGCCATTAGTGCAGCAGGCAgtgcaattaaataaatttgatattaaaagtGATGGTGAAGCGACTCCTGGTCCCAGTGCTTCGCCCGTCTCTGTGGGTAGCCATGCTTGTGAAGTTTgcggaaaaatttttcaatttcgatATCAACTTATTGTTCATCGACGGTATCATACAGAAAGAAAACCATTTACTTGTCAGGTATGCGGCAAAGCATTCACAACAGCAACAGATTTAACACGTCATGGAAAATGTCATTTGGGTGGTTCCATGTTCACGTGTGCAGTTTGCTTCCACGTTTTCGCCAATGCACCTTCGTTAGAGCGACATATGAAGCGACATGCCACAGATAAGCCATATAATTGCACAGTTTGTGGTAAAAGTTTTGCAAGAAAAGAACATCTCGATAATCATACGAGATGTCATACAGGAGAAACTCCATATAGatgtcAATACTGCGCTAAGACATTTACCCGTAAGGAACATATGGTAAATCACGTGCGTAAGCATACAGGTGAAACGCCACATCGTTGTGACATTTGTAAGAAATCTTTCACGCGTAAAGAACATTTTATGAACCATGTAATGTGGCATACTGGTGAAACACCTCATCATTGTCAAGTTTGCGGCAAAAAATACACACGGAAAGAACATTTGGCAAATCATATGCGTTCCCATACTAATGATACACCTTTCCGATGTGAGATTTGCGGCAAATCGTTCACACGTAAGGAACATTTTACGAATCACATAATGTGGCACACAGGTGAAACGCCGCATCGATGTGATTTTTGTTCCAAGACATTTACTCGAAAGGAACATCTTCTTAATCACGTCAGGCAACATACGGGAGAGTCACCACATAGATGCGGCTTCTGTTCTAAATCGTTTACCAGAAAGGAACATCTTGTTAATCACATCCGCCAACACACAGGAGAGACACCCTTCCGCTGCCAGTACTGTCCTAAAGCATTCACGCGTAAAGATCACCTGGTTAATCACGTCAGACAACACACGGGTGAGTCACCACATAAGTGCCAGTATTGCACGAAATCTTTCACAAGGAAGGAACATTTGACAAATCACGTGCGTCAACATACAGGCGAATCACCGCATCGATGTCACTTTTGTTCAAAATCATTTACGAGAAAGGAACATCTGACGAATCATGTAAGAATCCACACTGGTGAATCGCCTCACAGATGTGAATTTTGTCAACGTACTTTTACACGCAAGGAACATCTTAATAATCATCTTAGACAACATACTGGTGATTCATCCCATTGCTGTAACGTCTGTTCCAAACCATTTACAAGaaagGAGCATCTCATCAACCATATGCGCTGTCACACGGGTGAAAGACCATTTGTCTGTACCGAGTGCGGCAAGAGCTTCCCACTTAAAGGAAATCTTTTATTCCACATGCGTTCACATAACAAAGGTAGTCAAGCTGAACGTCCGTTCCGTTGTGATCTTTGTCCTAAGGATTTCATGTGCAAAGGTCATCTTGTATCTCATCGTCGTTCACATTCAGATGAACGACCTCATAGTTGTCCTGATTGTGGCAAAACTTTTGTCGAAAAGGGTAATATGTTACGTCATTTACGTAAACATGCAGCTGAAGGCCCACCAACACAAGTTAGTAGTGCAGCGTCTGCATTAGCTGGACAACAAGCAACCACTGCAACATCAGTTTTACCAATACCAACAGCAGCGGCTGCTGCTGCTGCAGTATTAGTTGGTCATCCACTTGCACCACCACCTGCACCAGCAGTAGCTTTACCTCAACATACCGTCGTTGTGCCCACACCACCTGGTGTACTTGCTTCTTACTGA
- Protein Sequence
- MNTEQHALPATTQAQQEEVNAGQSGRPAYPGGLATSTSIGNVGNIPHSSADLRVGTAVALASSVAKYWFLTNLIPGPIPQVSVYHPHHRSGTVGGENQTTKDSTSLLNQDMSLTTGTQNQTSASHHQSSFTVQIPVSLPGLSLDGSHLQASVSHLQAAHAQMQQQMQTQQAQLHQQQQQQQQQQAQAHHQMQSHQNAQSAAQTNQNQNSSRENKSKEDQSDRCNDNQVHSHVPCDHQHQQAQDLQQSLMHQQQQIGVNIGGASTADGANSSGVEKVEKKEDIRQLNMTQFQIPDLKAASHMMDVRTADGSIVKISAPNDQDLAKTLGVDISQYINKGAGNVEELNQINQLLLYHEVFGKLQSEIATGTTLINSTIPTQTVTTIQNGAPLVQQAVQLNKFDIKSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTTATDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLINHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSQAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSSAASALAGQQATTATSVLPIPTAAAAAAAVLVGHPLAPPPAPAVALPQHTVVVPTPPGVLASY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00286639;
- 90% Identity
- -
- 80% Identity
- -