Basic Information

Gene Symbol
spoplb
Assembly
GCA_017163975.1
Location
JAFFSR010000229.1:5744863-5763480[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 4.2e-29 1.3e-26 95.5 1.8 1 109 167 273 167 274 0.95
2 4 2e-26 6.1e-24 86.9 0.5 1 108 464 569 464 571 0.94
3 4 7.4 2.3e+03 1.4 0.0 80 108 573 601 569 603 0.84
4 4 5.2e-25 1.6e-22 82.4 2.3 7 108 773 872 769 874 0.95

Sequence Information

Coding Sequence
ATGGAATTATATTGCAGTGATGAATATTCGATAATTTGGAAGCTATCTCGATATGTAGATGAACGTCTAGTATCGTTTACGACTGAATATTATTGTCATCCGattcatttttttagatttcaatgttatttaaaatacgATTGGGATTTGCAAGATGATTGTAATATTGAATTAGAATTGCATGGGAGCCTGCGTATGGAATATCCGTGTGATCTTCCcgaaaatatacatatatcattATCTCTTATTGATGCGAATAAGAGATTACGGAATACTCATAAAAGAGTTATTAAAACTATAGATcaacaagttttaaaaatgaattttccaaaatttagtaataaagctgatttattaaatgaaaataataattttttgacaaaTGAAGAATTTACTATACATTGCAAAATATaccaaggcgaagagagaaatgaaaagagagaaaaaatattacttGATGATGATACCCCAGCATGTCAATTGAAAGTACtcgataattttgaaaaactactAGAAAGTGAAAAGTTTAGTGACATGAAATTTATCATAGacaataaagaatttaaagttcacaaaaatattttatcagcgCAAAGTCCGGTGTTCGAAGCCATGTTTAAACATAATACGGAAGAACAAAGAAACAATTCAGTTGAAATAATTGATATCAGTTATGGAACAATGAAAGAAGTTCTAAGATTTATTTATGCAggaaaagttaataatattaaaaaaatggctAAGGATATTTTTCTAGCGGCCGAAAAGTATCAGATCGATTCATTGAAAATGCTTtgtgaaaatgaattaattgaATCTATAAGGATTAGAAATATTGGTGACATGTTAAAGTTAATTGATCAATATGAttcaaaaaatcttaaaaaagCAATGGCTTCGAAGAGAAAACGATCATCAAATCAAGTTGTAGAAAATGAAGTGTTAAAAATTAGAAGTACATATGATGAAGGAATTGACTTAAGCGAAGATTATTCGATAATTTGGAAGATACCTCAGGATTCAGGTTATCGAGAAGGATCTTTTTTCCTCGGATACCGTAGTTATCTAAACacttatttgaaattaaaatgtaaCTTAAGATTTGTATGGGATTTGAAAGACTCCTATAGTATTGTATCAGAAGTGCATGGAAATAGTCTCATGAAATTTCCGTACAATTTTCCTGAAAGTATGCATATATCATTATCTCTTCTTGACACAAATAATAGAaaagcagatttatttgatgaaaataatagttttctCTCAAATGGACAGTTgataatttattgcaaaatataCCATGGCGAAGAAAGAcatataaaaactgaaaaaatatttcttgatgATGATTCTCCAACGAGTTGTGAACGAAAAGTACTCGATAATTTTGAAGGATTATTAAAAAGTGGAGAATTCAGCGACATGAAGTTTATCATAGGCAGTAAGGAATTAAAAGttcacaaatatattttatcagcTCAAAGTCCCGTGTTCGAAGCCATGTTTAAACATGATACTCAAGAACAAAGAAATAACTCCGTggaaataattgatattagttACAATGCAATGAAAGAAGTTTTAAGATTTCTGTATGCAggaaaagttaataatattgaaacgTTTGCCAAGGATATTTTTGTAGCAGCCGATAAGTACGAGATCAATGCATTGAAAGCGATGTGTGAAGTTGAATTAATTGGATCTTTAAGTATTGAAAATATAAGTGACATGCTAACGTTGCTTGATCGATATGAttctaaatatcttaaaaaagCAATGGCTTCGAAGAGAAAACGATCATCAAATCAAGTTGTAGAAAATGAAGTGTTAAAAATTAGAAGTACATATGATGAAGGAATTGACTTAAGCGAAGATTATTCGATAATTTGGAAGATACCTCAGGATTCAGGTTATCGAGAAGGATCTTTTTTCCTCGGATACCGTAGTTATCTAAACacttatttgaaattaaaatgtaaCTTAAGATTTGTATGGGATTTGAAAGACTCCTATAGTATTGTATCAGAAGTGCATGGAAATAGTCTCATGAAATTTCCGTACAATTTTCCTGAAAGTATGCATATATCATTATCTCTTCTTGACACAAATAATAGAaaagcagatttatttgatgaaaataatagttttttctcaaatgaagaattgataatttattgcaaaatataCTATGGCGAAGAGAGAAATGTCACTGCACAAATATTACTTGATGATGATGTTCCAGCATATTGTGAACGAAAAGTACTTGATAATTTTGAGAGTTTACTAGAAAGTGGAAAGTTCAGCGACATGAAtggGGAATTCAGCGACATGAAGTTTATCATAGACAGTAAAGAATTAAAAGtgcacaaaaatattttatcagcgCAAAGTCCTGTGTTCGACGCCATGTTTGCACATGATACTCAAGAGCAGAGGAATAATTCTGTTGAAATAATTGATGTTAGCTACGAAACAATGACAGAAGTTTTAAGATTTCTTTATTCGGCAAAAGTAAACAACATCAAAAAAATGGCTAAGGATATTTTTATAGCGGCCGATAAGTACGAGATCGATACACTGAAAATGCTCTGCGAACATGAATTAATTGAATGTTTAagtgttgaaaatataagtGATGTGTTAATGTTAGTTAATCAATATGATTCTGAATATCTTAAAAAGCATGcctttgattttattactattaatacagaagatttaaataatagagaaaattttcatgaaacaCTTGATATTTTGtcacttaatttattaaaagaaatcaatCAAATATCAAACACGAGAATTTAG
Protein Sequence
MELYCSDEYSIIWKLSRYVDERLVSFTTEYYCHPIHFFRFQCYLKYDWDLQDDCNIELELHGSLRMEYPCDLPENIHISLSLIDANKRLRNTHKRVIKTIDQQVLKMNFPKFSNKADLLNENNNFLTNEEFTIHCKIYQGEERNEKREKILLDDDTPACQLKVLDNFEKLLESEKFSDMKFIIDNKEFKVHKNILSAQSPVFEAMFKHNTEEQRNNSVEIIDISYGTMKEVLRFIYAGKVNNIKKMAKDIFLAAEKYQIDSLKMLCENELIESIRIRNIGDMLKLIDQYDSKNLKKAMASKRKRSSNQVVENEVLKIRSTYDEGIDLSEDYSIIWKIPQDSGYREGSFFLGYRSYLNTYLKLKCNLRFVWDLKDSYSIVSEVHGNSLMKFPYNFPESMHISLSLLDTNNRKADLFDENNSFLSNGQLIIYCKIYHGEERHIKTEKIFLDDDSPTSCERKVLDNFEGLLKSGEFSDMKFIIGSKELKVHKYILSAQSPVFEAMFKHDTQEQRNNSVEIIDISYNAMKEVLRFLYAGKVNNIETFAKDIFVAADKYEINALKAMCEVELIGSLSIENISDMLTLLDRYDSKYLKKAMASKRKRSSNQVVENEVLKIRSTYDEGIDLSEDYSIIWKIPQDSGYREGSFFLGYRSYLNTYLKLKCNLRFVWDLKDSYSIVSEVHGNSLMKFPYNFPESMHISLSLLDTNNRKADLFDENNSFFSNEELIIYCKIYYGEERNVTAQILLDDDVPAYCERKVLDNFESLLESGKFSDMNGEFSDMKFIIDSKELKVHKNILSAQSPVFDAMFAHDTQEQRNNSVEIIDVSYETMTEVLRFLYSAKVNNIKKMAKDIFIAADKYEIDTLKMLCEHELIECLSVENISDVLMLVNQYDSEYLKKHAFDFITINTEDLNNRENFHETLDILSLNLLKEINQISNTRI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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