Amac001148.2
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- -
- Assembly
- GCA_949128115.1
- Location
- OX421961.1:10280684-10291974[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 9.9 5.4e+02 2.6 2.3 1 23 120 143 120 143 0.88 2 15 0.0027 0.15 13.8 4.0 1 23 209 231 209 231 0.96 3 15 0.64 35 6.3 1.0 1 23 240 262 240 262 0.97 4 15 0.0067 0.37 12.6 5.8 1 23 270 292 270 292 0.99 5 15 0.012 0.64 11.8 5.1 1 23 301 323 301 323 0.96 6 15 0.0008 0.044 15.5 1.2 2 23 333 354 332 354 0.97 7 15 0.0041 0.22 13.2 0.5 1 23 363 385 363 385 0.98 8 15 0.0012 0.068 14.9 0.5 1 23 394 416 394 416 0.97 9 15 5.6e-05 0.0031 19.1 3.9 2 23 427 448 426 448 0.97 10 15 5.9e-05 0.0032 19.0 2.6 1 23 457 479 457 479 0.97 11 15 0.12 6.7 8.6 8.0 1 23 488 510 488 510 0.96 12 15 0.0009 0.049 15.3 1.1 1 23 526 548 526 548 0.97 13 15 5.4e-06 0.0003 22.3 1.6 3 23 561 581 559 581 0.97 14 15 2.8e-05 0.0015 20.1 1.6 1 23 590 612 590 612 0.98 15 15 0.0022 0.12 14.1 6.0 1 23 621 643 621 643 0.98
Sequence Information
- Coding Sequence
- ATGGTTGATGGTTCCCGGCGAGCTACTGAGAGGAAGTTGAGAAAAACCGCCCTCACCCCCTTCGCCGAGACCCACACCTTCCGCGGCACCAGCCGACCCGGTTCCCACACGGAACTACCTACTCCGCCTGCCTCGCAGCCACCGAGTCCCCGTTGCCGACTCAAGAATCTCCGGCTAGCCATGGACAAGGTGCCCACCACCGACAGCCAACCCCCTACGTCGCGTCCGGACCAGAGATTACCTCCGACCCCGGCAGTATGGTCATTCCAGCTCGAACGTCACACCCAGAAGAACCACAGAGCCGTCGACAAAACCGAAATGCACCAGATCATAACACAGCCGGACCGACCGGAACCGTATTCTTGCTTTTATTGCGATTTCAAGAGCTATTTCAAACTAGAGCTATACGAACATTGGGTACGTAAACATGACACAGGAAACGAATACGGGAGCAATGAAAACTGGCAGTTGCACGAGGAATGTCAACAATATCTTTGTGACAACTGCAACTACGAAAGCTACTCGATTTTATCCAAGATAAAACATGATGGTTCGTGTGAAAATAAGGACATAAAACCGATAAATATGATTTCTATTGATTCAACAAAGACACAAAATAACGATTTCCAATGCGTGCATTGTTCGTACACAAGCAAAACTAGGAGAAACTTGAACCGGCACTTGGTGCAGCATGTTCCAGCACAACAAATCAAATGGTTCAATTGCGACAGGTGTTCATTCCGCGCCAGGACGAAAAGGGGCGTGACTGGGCACATGTTGACGCACGTTTCGGCCGGCCGCGGCCGATTCAAGTGCACgcagtgttcgtaccgagcgAAACGAACGTTTCATTTGAAAAACCACATGCTAACCCACGCCGCACCCGACGAAATCAAATGGCACTGTTGCACGCAGTGCTCGTACCGCGGCAAGCGAAAAGGAGACTTGAAAGCGCACATGCTGCGACACGCCAAGGACGGAGAGATCCAGTGGGTCAGCTGCGCGCAATGTTCGTACCGATCCAGAGACAAACGCAACTTGACCCAgcacatgctgacgcacgcTTCGCCGGACCAAGTCCAATGGTTCGAGTGCAACGAATGCTCGTACCGTTCCAGACTGCGAGCCAACCTGCGACTGCACCTGTTGATCCACGCTCCGGCCGACGAAATCGCTTGGTTCAATTGCCCGCAGTGTTCGTACCGCTCGAAGCAAAAAGCTGGCCTGAAAGCGCACCTGGCCAGGCACGCCCCGGAGAACGGCATGTTCGACTGGCTGCACTGCACCAAATGCTCGAAGCCCTTCAAAGACAAGACCACTCTGGCGAGGCACTTGAAGACGCACGCGGCGCCCGAAGAAATCAGATGGCACAGCTGCCCGCAGTGTTCGTATCGCGCCTCGCGAAGAGAAAACCTGAAACGGCACATGTTGACGCACGCCCCGGACGAACAGCGGCTGTGGCACTGCTGCGACCAGTGCCCGTACCGCGTCAAAGAAAAGAAGCACCTGAAAAAGCACTTGTTGCGACACGCCGAAGCGCTCGCTCTCTCCAACGCCACGCTGGAGGAAACTTGGTTCGATTGCCCGCAGTGTTCGCATCGGACGAAGGACGCGGCGGCGCTGAAGACGCACATAAAACGACACGCTTTGGCGAGCGGCGTGGGCGACGACGGCATGATCTGCGCCAAGTGTTCGTATCGGTTCAAAGACAGGAGCAGTCTGACGAGGCACATGATGACGCACGCCGCGCCCGAAGAACTGGAATGGTTCAGTTGCACCGAATGTTCGTACCGTGCGATACGGAAGGAAAACCTGAAGAGACACATGCAGACACACGCCCCGGAAGAAGAGATGTTGTGGTTCCGTTGCGATAAGTGTTCGTACCGGGTGAAAGACAAGCGGCATTTGAAAAAGCACTTATCGAAACATGCTGCGCCTGAGTGCGACCCCTTGAAACTTGATCTTTGA
- Protein Sequence
- MVDGSRRATERKLRKTALTPFAETHTFRGTSRPGSHTELPTPPASQPPSPRCRLKNLRLAMDKVPTTDSQPPTSRPDQRLPPTPAVWSFQLERHTQKNHRAVDKTEMHQIITQPDRPEPYSCFYCDFKSYFKLELYEHWVRKHDTGNEYGSNENWQLHEECQQYLCDNCNYESYSILSKIKHDGSCENKDIKPINMISIDSTKTQNNDFQCVHCSYTSKTRRNLNRHLVQHVPAQQIKWFNCDRCSFRARTKRGVTGHMLTHVSAGRGRFKCTQCSYRAKRTFHLKNHMLTHAAPDEIKWHCCTQCSYRGKRKGDLKAHMLRHAKDGEIQWVSCAQCSYRSRDKRNLTQHMLTHASPDQVQWFECNECSYRSRLRANLRLHLLIHAPADEIAWFNCPQCSYRSKQKAGLKAHLARHAPENGMFDWLHCTKCSKPFKDKTTLARHLKTHAAPEEIRWHSCPQCSYRASRRENLKRHMLTHAPDEQRLWHCCDQCPYRVKEKKHLKKHLLRHAEALALSNATLEETWFDCPQCSHRTKDAAALKTHIKRHALASGVGDDGMICAKCSYRFKDRSSLTRHMMTHAAPEELEWFSCTECSYRAIRKENLKRHMQTHAPEEEMLWFRCDKCSYRVKDKRHLKKHLSKHAAPECDPLKLDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00078855;
- 90% Identity
- iTF_00078855;
- 80% Identity
- iTF_00078855;