Basic Information

Insect: Anaspis maculata
Gene Symbol: -
Assembly: GCA_949128115.1
Location: OX421961.1:10280684-10282417[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 8.5 4.7e+02 2.8 2.3 1 23 42 65 42 65 0.88

2 15 0.0024 0.13 14.0 4.0 1 23 131 153 131 153 0.96

3 15 0.55 30 6.5 1.0 1 23 162 184 162 184 0.97

4 15 0.0058 0.32 12.8 5.8 1 23 192 214 192 214 0.99

5 15 0.01 0.55 12.0 5.1 1 23 223 245 223 245 0.96

6 15 0.00069 0.038 15.7 1.2 2 23 255 276 254 276 0.97

7 15 0.0035 0.19 13.5 0.5 1 23 285 307 285 307 0.98

8 15 0.0011 0.058 15.1 0.5 1 23 316 338 316 338 0.97

9 15 4.8e-05 0.0026 19.3 3.9 2 23 349 370 348 370 0.97

10 15 5.1e-05 0.0028 19.2 2.6 1 23 379 401 379 401 0.97

11 15 0.11 5.8 8.8 8.0 1 23 410 432 410 432 0.96

12 15 0.00077 0.043 15.5 1.1 1 23 448 470 448 470 0.97

13 15 4.7e-06 0.00026 22.5 1.6 3 23 483 503 481 503 0.97

14 15 2.4e-05 0.0013 20.3 1.6 1 23 512 534 512 534 0.98

15 15 0.0019 0.11 14.3 6.0 1 23 543 565 543 565 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	8.5	4.7e+02	2.8	2.3	1	23	42	65	42	65	0.88
2	15	0.0024	0.13	14.0	4.0	1	23	131	153	131	153	0.96
3	15	0.55	30	6.5	1.0	1	23	162	184	162	184	0.97
4	15	0.0058	0.32	12.8	5.8	1	23	192	214	192	214	0.99
5	15	0.01	0.55	12.0	5.1	1	23	223	245	223	245	0.96
6	15	0.00069	0.038	15.7	1.2	2	23	255	276	254	276	0.97
7	15	0.0035	0.19	13.5	0.5	1	23	285	307	285	307	0.98
8	15	0.0011	0.058	15.1	0.5	1	23	316	338	316	338	0.97
9	15	4.8e-05	0.0026	19.3	3.9	2	23	349	370	348	370	0.97
10	15	5.1e-05	0.0028	19.2	2.6	1	23	379	401	379	401	0.97
11	15	0.11	5.8	8.8	8.0	1	23	410	432	410	432	0.96
12	15	0.00077	0.043	15.5	1.1	1	23	448	470	448	470	0.97
13	15	4.7e-06	0.00026	22.5	1.6	3	23	483	503	481	503	0.97
14	15	2.4e-05	0.0013	20.3	1.6	1	23	512	534	512	534	0.98
15	15	0.0019	0.11	14.3	6.0	1	23	543	565	543	565	0.98

Sequence Information

Coding Sequence: ATGCAATGTTCACATCGAGCAGTATGGTCATTCCAGCTCGAACGTCACACCCAGAAGAACCACAGAGCCGTCGACAAAACCGAAATGCACCAGATCATAACACAGCCGGACCGACCGGAACCGTATTCTTGCTTTTATTGCGATTTCAAGAGCTATTTCAAACTAGAGCTATACGAACATTGGGTACGTAAACATGACACAGGAAACGAATACGGGAGCAATGAAAACTGGCAGTTGCACGAGGAATGTCAACAATATCTTTGTGACAACTGCAACTACGAAAGCTACTCGATTTTATCCAAGATAAAACATGATGGTTCGTGTGAAAATAAGGACATAAAACCGATAAATATGATTTCTATTGATTCAACAAAGACACAAAATAACGATTTCCAATGCGTGCATTGTTCGTACACAAGCAAAACTAGGAGAAACTTGAACCGGCACTTGGTGCAGCATGTTCCAGCACAACAAATCAAATGGTTCAATTGCGACAGGTGTTCATTCCGCGCCAGGACGAAAAGGGGCGTGACTGGGCACATGTTGACGCACGTTTCGGCCGGCCGCGGCCGATTCAAGTGCACgcagtgttcgtaccgagcgAAACGAACGTTTCATTTGAAAAACCACATGCTAACCCACGCCGCACCCGACGAAATCAAATGGCACTGTTGCACGCAGTGCTCGTACCGCGGCAAGCGAAAAGGAGACTTGAAAGCGCACATGCTGCGACACGCCAAGGACGGAGAGATCCAGTGGGTCAGCTGCGCGCAATGTTCGTACCGATCCAGAGACAAACGCAACTTGACCCAgcacatgctgacgcacgcTTCGCCGGACCAAGTCCAATGGTTCGAGTGCAACGAATGCTCGTACCGTTCCAGACTGCGAGCCAACCTGCGACTGCACCTGTTGATCCACGCTCCGGCCGACGAAATCGCTTGGTTCAATTGCCCGCAGTGTTCGTACCGCTCGAAGCAAAAAGCTGGCCTGAAAGCGCACCTGGCCAGGCACGCCCCGGAGAACGGCATGTTCGACTGGCTGCACTGCACCAAATGCTCGAAGCCCTTCAAAGACAAGACCACTCTGGCGAGGCACTTGAAGACGCACGCGGCGCCCGAAGAAATCAGATGGCACAGCTGCCCGCAGTGTTCGTATCGCGCCTCGCGAAGAGAAAACCTGAAACGGCACATGTTGACGCACGCCCCGGACGAACAGCGGCTGTGGCACTGCTGCGACCAGTGCCCGTACCGCGTCAAAGAAAAGAAGCACCTGAAAAAGCACTTGTTGCGACACGCCGAAGCGCTCGCTCTCTCCAACGCCACGCTGGAGGAAACTTGGTTCGATTGCCCGCAGTGTTCGCATCGGACGAAGGACGCGGCGGCGCTGAAGACGCACATAAAACGACACGCTTTGGCGAGCGGCGTGGGCGACGACGGCATGATCTGCGCCAAGTGTTCGTATCGGTTCAAAGACAGGAGCAGTCTGACGAGGCACATGATGACGCACGCCGCGCCCGAAGAACTGGAATGGTTCAGTTGCACCGAATGTTCGTACCGTGCGATACGGAAGGAAAACCTGAAGAGACACATGCAGACACACGCCCCGGAAGAAGAGATGTTGTGGTTCCGTTGCGATAAGTGTTCGTACCGGGTGAAAGACAAGCGGCATTTGAAAAAGCACTTATCGAAACATGCTGCGCCTGAGTGCGACCCCTTGAAACTTGATCTTTGA
Protein Sequence: MQCSHRAVWSFQLERHTQKNHRAVDKTEMHQIITQPDRPEPYSCFYCDFKSYFKLELYEHWVRKHDTGNEYGSNENWQLHEECQQYLCDNCNYESYSILSKIKHDGSCENKDIKPINMISIDSTKTQNNDFQCVHCSYTSKTRRNLNRHLVQHVPAQQIKWFNCDRCSFRARTKRGVTGHMLTHVSAGRGRFKCTQCSYRAKRTFHLKNHMLTHAAPDEIKWHCCTQCSYRGKRKGDLKAHMLRHAKDGEIQWVSCAQCSYRSRDKRNLTQHMLTHASPDQVQWFECNECSYRSRLRANLRLHLLIHAPADEIAWFNCPQCSYRSKQKAGLKAHLARHAPENGMFDWLHCTKCSKPFKDKTTLARHLKTHAAPEEIRWHSCPQCSYRASRRENLKRHMLTHAPDEQRLWHCCDQCPYRVKEKKHLKKHLLRHAEALALSNATLEETWFDCPQCSHRTKDAAALKTHIKRHALASGVGDDGMICAKCSYRFKDRSSLTRHMMTHAAPEELEWFSCTECSYRAIRKENLKRHMQTHAPEEEMLWFRCDKCSYRVKDKRHLKKHLSKHAAPECDPLKLDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00078863;
90% Identity: iTF_00078863;
80% Identity: iTF_00078863;