Basic Information

Gene Symbol
dmd-4
Assembly
GCA_949128115.1
Location
OX421961.1:77964031-77980179[-]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.1e-25 7.4e-21 75.0 10.5 1 47 9 55 9 55 0.98
2 2 0.025 3.6e+02 2.4 0.6 29 35 253 259 251 269 0.88

Sequence Information

Coding Sequence
ATGTTATCTGCAAATCGTTCGCCACGGATTCCGAAATGCGCGAGGTGTAGAAATCATGGGATGATATCGACACTGAGGGGACACAAGAAGCAGTGCATTTATAAAAATTGTTCTTGTGCCAAATGTGGATTGATTAAAGAAAGACAGCGGATTATGGCTGCTCAGGTAGCTCTGAAGCGTCAACAGGCCGCCGAAGACGCCATCGCGTTGCACTTGGCCTCGGCAGAGAGCGGCACCACATATGACTACCTGCCTCCGGGTCGAATTTTCGGCATGCAAGTCACATCCCCCGAACCGGACCATCCCGAGTCGCCGGCGCCCCAGGAAAAACACCAGGTCGTCCCCGATCCCCATCAGTCCCCAGAGGAAATCCTCGTGAGTCCGGCCTCGATCGATATGCTCAGCAAGTTGTTCCCGAACAAGAAGAGATCCGTACTGGAGCTAGTACTGAAACGCTGCAATCACGATCTGCTGAAAGCCATCGAGCACTTTAACGTAAACACCCCGAGGTCTTCGACTTCGGAATCTGCACAATCTTCAACCGCCAGTAGCGCCAAAGAAGGGAGCAGCAGCGGCTCCTCCGCTTTCAAGCCGGTGGTGACTGCCGGCGCCAGAGCCAAACCCTTCATCAGCCCCCATCAAAGTTCCCTGTCCATGATACCAACCAGCAAGGTTTTCATGCACAGCCTCTATCCGTTTTTACCATTGTTCAACCCCCAGCCGGTCATACCCAGCCCTGTTTACGTGCCAGGATTCTGTGACTGCGAACAGTGCAAACACAGCATTTATGGAAAACTGGAACAGAGGCAGTCTTAG
Protein Sequence
MLSANRSPRIPKCARCRNHGMISTLRGHKKQCIYKNCSCAKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTTYDYLPPGRIFGMQVTSPEPDHPESPAPQEKHQVVPDPHQSPEEILVSPASIDMLSKLFPNKKRSVLELVLKRCNHDLLKAIEHFNVNTPRSSTSESAQSSTASSAKEGSSSGSSAFKPVVTAGARAKPFISPHQSSLSMIPTSKVFMHSLYPFLPLFNPQPVIPSPVYVPGFCDCEQCKHSIYGKLEQRQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-