Basic Information

Insect: Anarsia innoxiella
Gene Symbol: -
Assembly: GCA_947563765.1
Location: OX387405.1:4693148-4694482[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 3.6e-05 0.42 11.1 0.8 14 49 146 182 136 184 0.85

2 6 0.14 1.7e+03 -0.4 0.1 22 45 215 238 212 243 0.82

3 6 0.007 80 3.8 0.2 18 44 239 265 233 274 0.82

4 6 4.7e-06 0.054 14.0 0.2 22 50 271 298 268 302 0.86

5 6 0.017 2e+02 2.6 0.0 27 53 304 330 300 331 0.87

6 6 0.00023 2.6 8.6 0.2 9 48 339 378 335 381 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	3.6e-05	0.42	11.1	0.8	14	49	146	182	136	184	0.85
2	6	0.14	1.7e+03	-0.4	0.1	22	45	215	238	212	243	0.82
3	6	0.007	80	3.8	0.2	18	44	239	265	233	274	0.82
4	6	4.7e-06	0.054	14.0	0.2	22	50	271	298	268	302	0.86
5	6	0.017	2e+02	2.6	0.0	27	53	304	330	300	331	0.87
6	6	0.00023	2.6	8.6	0.2	9	48	339	378	335	381	0.89

Sequence Information

Coding Sequence: ATGGATAAAATGTGCAGAGTGTGCGGCATAAACATAGGTATCTCTTGCATTTTTACTGCTAACCAAGGACTAGGAGTTAGTGCCAAGATTTTGTACTGCTGCTCCAAAGTATCAATTGTAGAAGGAGATGGTCTACCAACCAACATTTGTAGAGACTGTGAGGCTGAAGTTGAAGTGGCCTATCGATTTGTTCTTAAATGTGAAGCTACAGATAAACTGCTTAGAACAGAACTTTGCACTTTTGAAGAGCCAAAAGATATATCAAAACTGAATGAAACTGAACCAAAGCTTGAAGTTAAAGATGAAGATAGCTGTACTAGTGATAACGAAAACATTTATCTAAATAATCCACAAATTCATAACACCGAATCAGAATTGGAAAAAGAAGTCGATCTTAAAAGCAAACATGTAACTCAGAGAGTGAAAAAACTAGAAACTAAGAAATCTAGGAGCGAATGTTCTAAAGCACCATTCCATTGTCCGAGCTGCAATAAAAAATACAAAGATAGAATTACTTTAAAAAGGCACATAGAAAGACTTCATTATGAAGGAATCAGGGAACGTAACTTTATCTGTGAAAATTGCGGCAAAGGATTCTTTACGAAAAATGACGTGAAGATCCACATGAGAATCCATACAGGTGAGACACCGTATGCTTGTACAGAATGCCCAAGAAAGTTCACACAAAACGGTGCTCTACTGCGTCACATGCAGAGGCATGCTGGAGAAAAACCACACACCTGTTCAACATGTAACAAAGCATTTTGTACAAGAAATGAACTCAAGTTCCATTTATTAGTTCACACAGATGAGAAGGGATACTCATGTCCTATTTGTAATGCACCTTTCAAATATCAAAACAATTTGAGGAAACACATGGTTAGACACACAGCTCCAAATAGCTTCCTCTGTCTGTATTGTGGGCGTACATTTAATCAAAAAGGTAACTTACAAGGTCACCTAAATAGACAACATTCTGAAAAATCTGGCTATTGTAATGTGTGTTTCAAAAATGTACCAGACATAGAAGCCCATACATGGAGACACACTGGAGAGCGACCATTGAAATGTCAGTTCTGTGCTAGTAGTTTCTTTGAGATGAAAGCTTTAGCTCGTCATGTTAACTATAGACATAAAAACCCAGACAAGTTTGAATGCACATTTGATGGATGCAGCCTAAAATTTCCATCTCGTATGATGTTGGATTTTCATACAAATAAGGAGCACAACACTAGTGTGCCATTCCCATGTGATCGCTGTACTAGAGGCTTTTACAGGAAAAATGATCTCGCTAGACATAAGATTGGAACCCATAAAGAAAAACTTCAAGACTAA
Protein Sequence: MDKMCRVCGINIGISCIFTANQGLGVSAKILYCCSKVSIVEGDGLPTNICRDCEAEVEVAYRFVLKCEATDKLLRTELCTFEEPKDISKLNETEPKLEVKDEDSCTSDNENIYLNNPQIHNTESELEKEVDLKSKHVTQRVKKLETKKSRSECSKAPFHCPSCNKKYKDRITLKRHIERLHYEGIRERNFICENCGKGFFTKNDVKIHMRIHTGETPYACTECPRKFTQNGALLRHMQRHAGEKPHTCSTCNKAFCTRNELKFHLLVHTDEKGYSCPICNAPFKYQNNLRKHMVRHTAPNSFLCLYCGRTFNQKGNLQGHLNRQHSEKSGYCNVCFKNVPDIEAHTWRHTGERPLKCQFCASSFFEMKALARHVNYRHKNPDKFECTFDGCSLKFPSRMMLDFHTNKEHNTSVPFPCDRCTRGFYRKNDLARHKIGTHKEKLQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00077782;
90% Identity: iTF_00077782;
80% Identity: iTF_00077782;