Basic Information

Insect: Anarsia innoxiella
Gene Symbol: -
Assembly: GCA_947563765.1
Location: OX387405.1:6669092-6670959[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.36 4.1e+03 -1.7 0.1 25 33 6 14 3 16 0.85

2 4 5.7e-10 6.6e-06 26.5 0.3 18 51 301 334 295 337 0.90

3 4 0.0012 14 6.2 0.0 16 46 388 418 385 421 0.80

4 4 3.8e-05 0.44 11.1 0.6 21 48 421 448 413 451 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.36	4.1e+03	-1.7	0.1	25	33	6	14	3	16	0.85
2	4	5.7e-10	6.6e-06	26.5	0.3	18	51	301	334	295	337	0.90
3	4	0.0012	14	6.2	0.0	16	46	388	418	385	421	0.80
4	4	3.8e-05	0.44	11.1	0.6	21	48	421	448	413	451	0.91

Sequence Information

Coding Sequence: ATGGACGAACTTTATTCTTCTTGTCGCATTTGCCTTGCTGTAGAAGCCAATATACCAATTTTCCTAAATGAAACTAATCATGAATATGATTTATTGCAAAAACTAAATTTATGTTTAGGTGAAGAGATAAAAGATATCCCTGGATATCCAAGACATATTTGCGGAAACTGTTACACAACAGTAAATGCAACAGTGTGTTTTATAAATAATTATAAACAATCATGCCAAGTTTTAAAAGAAACACTTACTGCACTGGGTCAGAATGAAAATATAAAGCTAGAAGATAAGGTGAAAGTAGAACCTGACTCTGAAATCTTCTTCATATATGATGAAGGAGATTTTGAAGAATATAAAACTGAAAAAATAGTGAAACCTGAATCTAAAATTATATTCAGTGACTCCAATCAGCTAGAGCAACTTATAAAACCATTTCTTAAGAAAGAAATAAATGGTTCAAAGAAAAGTGAAGGGAACATAGGTGATTCCAATCAGATAAAGCAACTAATAAAACCATTTCTCAAAAAAGATGAGAAAGAAATAAAACCTTCAAAGAAAAGTAAAGGGAAAATAGAAACAACAGAAGTTAAAAACAAAAAAAATAAGAAAGCTTCAAAGAAATGTGAAAAGAAAAATGTCAATTTCTCATATGAAACCATTGCATCAGGCATTCTTGAAGGAGATTTTGTATTTTTTGGAGATAAATGGGGTGTAGAGCCTATTAAAAAGCTTTCTGAAAAAGATAAAACTAATTCTGTAGAGACATGTAAAAGTAATGGAATTGTACCAGATAAGAAAGAAATAAAAAGTGTCCCTAGAGGAAATACTCCAGTTAAACTAGGGCTATGTGAATTTTGTGGTAACATGTACCGAAATCAAGATAGATTAAAACATCATATAACCCAGTCACATTTAGAAGTTCCTGTTACATGTCAAATATGCTCCAAAATTATTAAAAACTCAAGAGGATTGCGAGTACATATGAAAGTAAGGCATGAGAAAAAAGATTTCACTTGTTCTGTTTGTGGAATTAGTTTTGCCCATCAATACCGATTGAAACAGCACCAATTTAGGAAGCATTCCAATGAATATGTTAAGAAGAAGTATGAATGCAAAATCTGTGGGAAACAGTATACAAGTCAAACTAGTCTTTTGATACACACAAGATCTGTTCATACAGGTGAGCGTCCAGCGGTCTGTGATGTTTGTGGCGCCAGTTTTTATTTTAAGGCGTACCTGACGGAACACATGCGTCTTCACACTGGAGAAACTCCATATAAGTGTCCAGTGTGTGATCGAGGCTATGCTCAAAAATGCAATTTAAAAAGCCATATCAAACATAGACATAAGTTGTCACAACTTAGCAGCAATCAACTTAAGACTATTCCTCAAAGGTTTTTGAGATTTATGAAGCCTTAA
Protein Sequence: MDELYSSCRICLAVEANIPIFLNETNHEYDLLQKLNLCLGEEIKDIPGYPRHICGNCYTTVNATVCFINNYKQSCQVLKETLTALGQNENIKLEDKVKVEPDSEIFFIYDEGDFEEYKTEKIVKPESKIIFSDSNQLEQLIKPFLKKEINGSKKSEGNIGDSNQIKQLIKPFLKKDEKEIKPSKKSKGKIETTEVKNKKNKKASKKCEKKNVNFSYETIASGILEGDFVFFGDKWGVEPIKKLSEKDKTNSVETCKSNGIVPDKKEIKSVPRGNTPVKLGLCEFCGNMYRNQDRLKHHITQSHLEVPVTCQICSKIIKNSRGLRVHMKVRHEKKDFTCSVCGISFAHQYRLKQHQFRKHSNEYVKKKYECKICGKQYTSQTSLLIHTRSVHTGERPAVCDVCGASFYFKAYLTEHMRLHTGETPYKCPVCDRGYAQKCNLKSHIKHRHKLSQLSSNQLKTIPQRFLRFMKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00077862;
90% Identity: iTF_00077862;
80% Identity: iTF_00077862;