Ainn005207.1
Basic Information
- Insect
- Anarsia innoxiella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947563765.1
- Location
- OX387396.1:10427265-10443361[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-76 5.8e-72 242.9 28.4 1 293 121 393 121 400 0.88 2 2 0.17 3.8e+03 -2.8 7.2 126 166 421 465 414 474 0.51
Sequence Information
- Coding Sequence
- ATGGGCAGGGTAGAGGAGTACGAGACTCCTGAAAATAGTGACGAGGAGAGCGGAGAGGCTTTCACGGACGGAGACTTCGACGATACTGACGAAGATGTTCTAACGCCAGACGCCGCCGAACCCGTCAATGAAACTGTTAACATGAATGTAAAAAACACAGATGCAACGAACGGTATCTCAATTGATAATGGTTTCGACAGTGCGGATGACCAACCCAAAATGAACGGCCTAAAAAATGGACACGCGAGTGATTTGGAAAACCACAGCAATGGTGATCTCGTGATGCCTGAAGTAAGAAGAGATTCTCATGGAGATCAGAATCCTTCCATTGTCGGTATTATAGGAGACCAACACAATCACGCAGAACAGCGGCTAGCGGCTCGACGGGCGGCTCGCGCGGAAGCCCGTGAGATCCGCATGAGAGAGTTAGAGCGGCAACAGCGGGAGCAAGAAGACCATGCGGACAAGGCGTATGATATGTACTCAGAGACGGTGGTGCGCCGCGGTGGCAGTCGGCTGGCGGCACTCACACCGACGGCGCTGCACTCGCCGCGACGCGCCTCTGAAGACTCCGCCGATGACACCTTCAGCATCAAGGACCTTAGGCATGAGCTGAAAGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATATTAAACGCGCAGCTGGACAACGACAAGGCAGCGCTCGGGTACCAGCTGGAACTACTCAAGGATCGGATCGAGGAGCTGCATGAGGAGTATGCTCAGCTGCAGCGAGAACACAAAGAGAAATGCTCAGCGCACGAGCGTTTAAAACGCGAGCACGCATCTCTGGAGCGCGAGTTGTCCGCGGCTCGCGACGCCGTGCGGGCGCGGGACGCCGCCGTCACCGCCGCCGGGTACGCCTTTGTGGACGCGGCTGGGGGGGGGGACGCTGACGGACTGGCGCTGGCGCTCGTGTCGCAGCAGTCCGAGCAGCTGCTGCAGACTGCTGGGGAGGGGACACTTGACGTGCGATTACAAAACCTAGTGTCGTCTAAAGCGGCGCTAGAGTCGGAAGTACGCAAACTGAAGTTACAGTTGAACGACGAGAGAGCCGCCAGACAGAACGGGGTCGCCTCGCATCACGACCATGAGTTGGAGACAGAATTGGAGCAACTCCGCAAGTCGGTGGCGGAGGCGAAGGGTCGCGCGGCGCGCGCGGAGGCGGAGGCGGCGCTGCAGGCGGCGGCGGTGGCGCGGCTGGAGGCGCAGCTGGCGCGGTGCCGCGCGCGCCAGGACCAGCACGACGGGCTCGAGGAGCAGCTCAAGCAGGAGCGGCGGCGCCTGCAGAGAGAGGCGCGCGAAGCTCTCAACCGAGTCGAGGAGTTGGAGACGGAGAACAGCCACCTCACGAAACGACTCGACAAACTCAAGAACGCTAAGTCTGCACTCCTCAAAGACCTGTGA
- Protein Sequence
- MGRVEEYETPENSDEESGEAFTDGDFDDTDEDVLTPDAAEPVNETVNMNVKNTDATNGISIDNGFDSADDQPKMNGLKNGHASDLENHSNGDLVMPEVRRDSHGDQNPSIVGIIGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYSETVVRRGGSRLAALTPTALHSPRRASEDSADDTFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSAHERLKREHASLERELSAARDAVRARDAAVTAAGYAFVDAAGGGDADGLALALVSQQSEQLLQTAGEGTLDVRLQNLVSSKAALESEVRKLKLQLNDERAARQNGVASHHDHELETELEQLRKSVAEAKGRAARAEAEAALQAAAVARLEAQLARCRARQDQHDGLEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -