Ainn011040.1
Basic Information
- Insect
- Anarsia innoxiella
- Gene Symbol
- PAXBP1
- Assembly
- GCA_947563765.1
- Location
- OX387395.1:9443052-9452886[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.9 1e+04 -3.9 0.1 176 197 337 357 311 360 0.64 2 2 9.3e-18 1.1e-13 51.8 0.1 3 190 517 681 515 693 0.74
Sequence Information
- Coding Sequence
- ATGTCGTTATTTCGGAAGCCGAAAAAGATCCAACGTCGTGTTTTCACGGCAGATGATGACGATGACGGCGATGGGCCGCCAGCGGAGCCCCAAGCGCCTCCACCGCCGGTTATTAGCAAGTCTAAGGAGAAATCTACGAAGACAAAAGCTTTACTAAGCTTTGCTGATGAAGAGGAAGAAGGTGAAGTTTTCAAGGTTCGAAAGTCAAAGCAAAGCAACCGCCTCGCGAAACGCCGTGAGAAAGAACGTCGTAAACCACTTGATGATGATAATTATACTAACAATGATGGTGACAATCATTTCGATGAGCCGATGGAGACAGACATCGTCGAAAAAAAACCGAAGAAAAAGGTCACTTTGGAGGGGCTGATACTATCCGGTCGGGAGGCACTCGCAGCCGACGGTGCTGGAGACATCTCGGAAGAAGAAGGCAGTGGAAACGAGGAGGAAGATAATAGGGGTTTCCACCAATACCGGGCTGAGTCTGTCCGGGCCGCGTTGGCAGTCGGAGGCCACATCCCGGACGCTGCGTTGATCCACGCAGCTCGCAAGACTCGACAGCAGGCTCGCGAGTTAGGTGGAGACTACATACCGATTAAACAATCAGACCCGAAGCCAGGGTCGCGGCTTGTGAGAGATGATGATGGGTCAGGGGATGATGATGAAGATGGCAGGATTGAGGTCAGGGGGTTGGAGCTGCCTAGTGATAAACCGAAACGTGGTACAGCGGCGGCGCCCACCAACGAGGAGCTGGACAGCGAGCCTGACGAGTGGGAGGAGCAGCAGATCAAGAAAGCTATGCCGGCTCTACCTGATATGACTGCCGACGGTATAGAAATGAATCCGTTCGCGCTAGCCCCGCCCCCTCCGCGACTGGACGCTGCGCCGGCACACCTCCGACCGCTCGTTGATATCGCGCATGCGCCGCGGGCTTCAGCACAGGACCTTGttaacgctttgaggaatcgCCTAGACGAACTGAAAATGGAACGAGACAAAACAGCTTCTAAGAAAGAAGCAATAAAAGATAGATTGTCAAATGCTATACATATAAAAGAAAGTCGATCAGCTAGAAGGGGAGCTCTAGACGCAGCGTACAGAAGAGCTCAAGCAGCGAGGGGATACCTTACTGACCTTATTGAGTGTTTAGATGAGAAGATGGTAGCCCTCGAAGCTCTGGAGTCTCGAGCGTTAGCGTTACACCGACGTCGCTGCGAGTTCCTCACGGAACGCCGGCGGGCGGACGTACGGGATCAAGCTCAAGATGTTTTGGCGTTAGCTGCCCGACCAGGCGCAGCGAAACCAGTAGACACAGAAGACAAGATAAGACGCGCAGCAGAACGCGAAGGTAGACGACGAGCTCGAAGGTTGGCGAGGGAAGCAGCCGCTACCGCAGCTGGATCTGTGCATGCACATCGTGACGGAGACTCTAGTGATGATGAGCTTCCACCGGCTGAAAGACAGCATGAGGCTAGTGAGAGAGCAAGTATCCGCAGTCTATCGCAGTCCTTATTCTCGGACGCGCTGCCGGCGTGGCGCAGCGTGCGCGGCGTGGTGTCGCGGCTGGCGGCGTGGCGGCGTCGGGACCCCGTCACCTACACCGACGCCTATCTACCTGACTGTCTGCCGAAGCTACTCGCGCCCTATGTGCGGCATCAGCTAATCCTCTGGAACCCGCTAGCAGACGAAGACAACGAAGACTACGAGCGTATGGACTGGTACCAGTGCCTGATGATGTACGGCGTCCGCAGCGAGCGAGTCAGTGACTCTGACTCGGATTCCGACCCGGATGAACCGGTCCGGGTTTCTGAGGACAGTGTCCGAGATGACCCGGATTTGATGCTCGTGCCTACGATTGTGGCTAAAGTTGTGTTGCCTAAGGTTACTGAGCTAGTAGAGCAAGCATGGGACCCGATGTGCGTGCGCGCATGTATCCGGCTGCGCCAGCTGCTGGTGCGCGCGGGCGCGGTGTGCGGTGCGACGAGCGCGACGCGGCGGCTGTCGGCGGCGGTGAAGCTGCGCCTGAGTGCCGCCTTGAATGCTGACGTCTTTCTACCCGCGTTGCCGCCACAGATAATGGAGGGTGTGGGCGGCGCGTTCTGGCGTCGCTGCGTGGGTGCGGGGGTGCGTGTGCTGCGCGCCGCGCTGGCGCTCACCGCACCGCCACCGCTCTTGAAGGCTGACGGGGTCGTTATGGCGCTTATTGAAACCCTATGCTGCGCAGCGGGCGCGGCTCCGGGCCCGCAGATGATGTCGGCTGCGCGCGCGCTGGCGGAGACCTTACCGCGCTCCGGGGAGCTGCGCGCACGCGCCTTGCAGAGGATCGCCGCGCTAGCTACACTCGCGCTTACTCGGTTACAGGCTGATAATCCGTTGCATTTgaaAGCAATAGAACAAGCTAGAGCAGTGATTGGAGAGTCCAAATCGACGGAATGA
- Protein Sequence
- MSLFRKPKKIQRRVFTADDDDDGDGPPAEPQAPPPPVISKSKEKSTKTKALLSFADEEEEGEVFKVRKSKQSNRLAKRREKERRKPLDDDNYTNNDGDNHFDEPMETDIVEKKPKKKVTLEGLILSGREALAADGAGDISEEEGSGNEEEDNRGFHQYRAESVRAALAVGGHIPDAALIHAARKTRQQARELGGDYIPIKQSDPKPGSRLVRDDDGSGDDDEDGRIEVRGLELPSDKPKRGTAAAPTNEELDSEPDEWEEQQIKKAMPALPDMTADGIEMNPFALAPPPPRLDAAPAHLRPLVDIAHAPRASAQDLVNALRNRLDELKMERDKTASKKEAIKDRLSNAIHIKESRSARRGALDAAYRRAQAARGYLTDLIECLDEKMVALEALESRALALHRRRCEFLTERRRADVRDQAQDVLALAARPGAAKPVDTEDKIRRAAEREGRRRARRLAREAAATAAGSVHAHRDGDSSDDELPPAERQHEASERASIRSLSQSLFSDALPAWRSVRGVVSRLAAWRRRDPVTYTDAYLPDCLPKLLAPYVRHQLILWNPLADEDNEDYERMDWYQCLMMYGVRSERVSDSDSDSDPDEPVRVSEDSVRDDPDLMLVPTIVAKVVLPKVTELVEQAWDPMCVRACIRLRQLLVRAGAVCGATSATRRLSAAVKLRLSAALNADVFLPALPPQIMEGVGGAFWRRCVGAGVRVLRAALALTAPPPLLKADGVVMALIETLCCAAGAAPGPQMMSAARALAETLPRSGELRARALQRIAALATLALTRLQADNPLHLKAIEQARAVIGESKSTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -