Ahor032556.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- -
- Assembly
- GCA_963576865.1
- Location
- OY756413.1:11581774-11588646[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 3.8 3.9e+02 2.9 1.8 1 21 358 378 358 379 0.94 2 18 1.9e-05 0.002 19.6 2.0 1 23 392 414 392 414 0.98 3 18 1.2 1.2e+02 4.5 0.2 2 23 418 439 418 439 0.92 4 18 4.4 4.6e+02 2.7 5.2 3 23 446 467 444 467 0.93 5 18 0.011 1.1 10.9 0.2 2 23 522 544 521 544 0.96 6 18 0.002 0.21 13.2 4.5 1 23 550 573 550 573 0.97 7 18 0.0019 0.2 13.3 0.9 1 21 577 597 577 598 0.93 8 18 0.11 11 7.8 0.2 1 23 606 629 606 629 0.96 9 18 0.098 10 7.9 1.5 3 23 636 657 634 657 0.94 10 18 0.00021 0.022 16.3 0.5 2 23 670 691 669 691 0.96 11 18 1.5 1.6e+02 4.2 4.7 1 23 697 719 697 719 0.98 12 18 9 9.3e+02 1.7 0.3 2 12 725 735 724 738 0.87 13 18 0.0035 0.36 12.5 1.1 2 23 756 777 755 777 0.96 14 18 0.45 46 5.8 0.1 2 23 782 803 781 803 0.93 15 18 0.029 3 9.6 0.5 2 23 821 843 820 843 0.96 16 18 0.00023 0.024 16.2 1.5 1 23 849 871 849 871 0.98 17 18 0.029 3 9.6 8.8 2 23 878 899 877 899 0.96 18 18 0.0011 0.11 14.1 0.8 1 23 905 928 905 928 0.89
Sequence Information
- Coding Sequence
- aTGGAAGAAGTAAATACCTCATCGAAAACagcaaaagaaaaaattgactTCAACAATATACAGTGTCTGAAACAGAAACTGTCTTCGATATGTCAGGTGCAGAGATTCTGTGGCATTTGTTTGGAGAGCACGGAGAAACTGTGGTCCATCAATACAAAGTTTGATATTGCAGTCAGGCAGTTGACCCATAAAAAGCTTTTAAGGGAAATTATCGACTACATTCTTAATAATGAGAGTCAGCAAATTCTTGCCAGTCTCTACCTGTGCAGTCACTGTACGGAGAAATCAATTCAatcatatttattcatttataacgCCAAACAACTGTCAAAAATAATCTACGAATGTGTAAATGAGTTGTACTCCAAAACTGTTGATATTCAAAATCAGTTGCAAAAATTCGATAATTATCAAAATGCTAATGTTGTCATCGTTTTAGAACAAGAACACGAAATGAGCAACTACACAGATATTGGAAAAACAACCGAGATAGTAGCTAAAGAAACCATAAAGAACGAGGAAACAATTAAGGAAACAGAGGAGAAAGcggataatattaaaaaagaagtaATAAGACTTATAGACATAGCCGACACTCATTTGAAAGGAGGTGAAGATGTCTATGTTTacaaagaagaaataaaaaatgaagacATAGAAGTAACATATTTAAATGGCAATTTCCTACCACCGGATACTGAGACAGACAAAGTACATCCACAGTTAAAAACTGAAGTTGTCAGTTCAATGATAAAGAACGATTACATCCCAATTCTTACTACGAATGAGAATGCAACTCATGAAAACATAGTAATAACATATTTACAAGAGGACTTTCAACAACCgaaaattgacacaaataagGAATATACAGAAGTAAATACTGAACTTGTAGCAAGTAATGCTATCCCATCACTAACCGTTAATGAGGAAGTAACTAATGGACAAATAGAAATAACATATTTAGAAGAAGATTTTCTGACATCAGAAATTGAGTTGGATATGGataatacacaaataaaaactaaatgtgttagtccaaagaaaaaaaagaaaattatccCAACAACATACAAGTGTTCTAGATGTAGAGAGATACTTCCGTCTTTCAAAAGTTTTaaggaacacaaaaaaaaatgcaagaagaaaaaaactgaTCGAAGCAAGTTAATGTTTAAGTGTAAAGTTTGCAATGAAATATTTGTCACTCAAAGATCTTTGAACACTCATTATAAGTCCCATGCTAAAGCGAAATGTAAAGTCTGCCAATTTATAGTCCCTGAAGATGATTTGCAAGAACATATGAAAATTAATCATGAAGAATATGCCCATTTATGTAAGTTATGCAACTTTTTCTGCTTTACTGCTGAGGGATTAAAAACGCATACAGAAAAGAATCACAGCGGTCCTGAATGTGCCTTGTGTTCAAAAAAAGTCAAAGGAAAAGATTTGAAAAGGCACAGATGCAAATTCAATTGTTTAGAATGTTTAGACAACATCTGCATACATTATAAATACCTAGTCTCATACAAAGAGCAAGTTCTGAATAATATTACCAAAATAAAATGCGTTGACTGTGACTACGTCTGCCCTAGAAGAGAAGCATTACTTGGTCATGTTAATAGAGAACATTTGGATCATCACCCGTTTACTTGTGATCATTGCCAACAGCAGTTTTACTCTCGAACCACCTTGAGGTACCACATTAACATTTTTCATAAGGAGAGACATATTTGCGAGTCTTGTGACCAAGAGTTCACGACTAAAACCACTTTAGAAAACCATAGAAAACTTTGCCAGTGTATTGAGAGAGACTACAAATGTGATAATTGCATAAGTTCCTTTGAAACTCTAGAAGAATTAGCAAATCATGTTAAATTGCGACATGCAAAAGAGACTATCAATTGTAATTTGTGTAAGAAGAAATTTTTAAACAGCTTAAAGTTGCAAGATCACATGTTTAAAGTCCACAGTGGGATTCAGATCAAGAGAAAAGGGTGTCTTTTAATTTGTCCGATATGCGACGAGAAATGTGAGAATAAAAGGCAATTGCTTGAACATATAAAAATTCACGGACCAGACGCAAGGTTTCCCTGCAAAGAGTGTCATGTCGACTttgattgtataaaaaaactacacGCTCACATAAGAATGCACTATGATGATGTAATACAATGTGTTGACTGCAAGAAAGTATTGACAAGAACTTTCTACCCACACCACATGGTATATTGCAATGTTGGACGCGAAGCAAAAGAAGTTAGCACATGCGAAACATGTGGTAAGACCTTTCCCAATGAAGTTCAGTTTAAGTTTCACAGAAAAGTCCATTTAGAGAAAGTACCGTGCCCTATATGCAAAAAGCCAACAAAGCCTGTTTATATGAAGGGTCATATTAAACGCTTGCATAATACGTCTAGAAAACCCAAAATTCCTAAACCAAAGTATGTGAAAAATATGAAATGCGAATGGTGTGGACATCTTGTATCTCGATACGGTGAATTGGAGACTCATGTGAACCggtttcacttaaaaataaaaccatatcAATGTGACTACTGCCAAAAGTCATTTTTCGGTAAAGAGCGTTTAAGGGACCACCTAGTCACGCATACAACAGCGAAAAACTGTTATTGCAGTATTTGCAACCAGAAATGCGAGAACAAAGCGTGTCTTAAGCTTCACATGAGGAAACACACAGGTGTTAAACCTTACACTTGCGAAATATGTGGCGAAAGTTTTAGAACTTCGAGTATCATGAATACTCATAAAGTCAAGAAGCATTCAGAAAGGACAGTGGCGTGCCCTCTATGTGCTTCAATGTTTTATTTGACGAGAGAAATGAGGAGCCACTTTAAAAAGGTACATTGGAAGCAGAAACATAAGAAATTCGACCCTAGAGATGTTAAAGAATTAAGTCCTGCGTTTTATCACCTTTTTGAAGATGGACGATTAACCAAAGTAGATGGCGAAGAGTTGTATATCTCTTCCAAGTTTAATGAGAAATATGAATAA
- Protein Sequence
- MEEVNTSSKTAKEKIDFNNIQCLKQKLSSICQVQRFCGICLESTEKLWSINTKFDIAVRQLTHKKLLREIIDYILNNESQQILASLYLCSHCTEKSIQSYLFIYNAKQLSKIIYECVNELYSKTVDIQNQLQKFDNYQNANVVIVLEQEHEMSNYTDIGKTTEIVAKETIKNEETIKETEEKADNIKKEVIRLIDIADTHLKGGEDVYVYKEEIKNEDIEVTYLNGNFLPPDTETDKVHPQLKTEVVSSMIKNDYIPILTTNENATHENIVITYLQEDFQQPKIDTNKEYTEVNTELVASNAIPSLTVNEEVTNGQIEITYLEEDFLTSEIELDMDNTQIKTKCVSPKKKKKIIPTTYKCSRCREILPSFKSFKEHKKKCKKKKTDRSKLMFKCKVCNEIFVTQRSLNTHYKSHAKAKCKVCQFIVPEDDLQEHMKINHEEYAHLCKLCNFFCFTAEGLKTHTEKNHSGPECALCSKKVKGKDLKRHRCKFNCLECLDNICIHYKYLVSYKEQVLNNITKIKCVDCDYVCPRREALLGHVNREHLDHHPFTCDHCQQQFYSRTTLRYHINIFHKERHICESCDQEFTTKTTLENHRKLCQCIERDYKCDNCISSFETLEELANHVKLRHAKETINCNLCKKKFLNSLKLQDHMFKVHSGIQIKRKGCLLICPICDEKCENKRQLLEHIKIHGPDARFPCKECHVDFDCIKKLHAHIRMHYDDVIQCVDCKKVLTRTFYPHHMVYCNVGREAKEVSTCETCGKTFPNEVQFKFHRKVHLEKVPCPICKKPTKPVYMKGHIKRLHNTSRKPKIPKPKYVKNMKCEWCGHLVSRYGELETHVNRFHLKIKPYQCDYCQKSFFGKERLRDHLVTHTTAKNCYCSICNQKCENKACLKLHMRKHTGVKPYTCEICGESFRTSSIMNTHKVKKHSERTVACPLCASMFYLTREMRSHFKKVHWKQKHKKFDPRDVKELSPAFYHLFEDGRLTKVDGEELYISSKFNEKYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00075978;
- 90% Identity
- -
- 80% Identity
- -