Ahor033373.2
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- -
- Assembly
- GCA_963576865.1
- Location
- OY756415.1:3757769-3761430[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.32 33 6.3 1.6 1 23 21 43 21 43 0.94 2 30 0.018 1.8 10.2 0.4 2 23 71 93 70 93 0.93 3 30 5.9 6.1e+02 2.3 5.8 2 23 114 136 113 136 0.94 4 30 0.059 6.2 8.6 4.6 2 23 142 164 141 164 0.94 5 30 0.0024 0.25 13.0 0.9 1 23 168 191 168 191 0.92 6 30 0.53 55 5.6 0.7 3 23 195 216 194 216 0.97 7 30 7.2 7.5e+02 2.0 0.0 2 19 223 240 222 243 0.91 8 30 0.073 7.6 8.3 2.3 1 23 291 314 291 314 0.97 9 30 4.5 4.7e+02 2.7 0.1 2 23 343 365 342 365 0.91 10 30 0.22 23 6.8 1.8 1 23 387 410 387 410 0.93 11 30 0.00039 0.04 15.5 0.3 3 23 417 438 416 438 0.92 12 30 0.0021 0.22 13.1 1.0 1 22 443 464 443 466 0.90 13 30 0.0054 0.56 11.9 0.2 2 23 472 494 472 494 0.90 14 30 0.00028 0.029 15.9 4.2 1 23 498 521 498 521 0.97 15 30 0.0018 0.19 13.4 0.4 2 23 528 549 527 549 0.97 16 30 0.014 1.5 10.5 1.6 1 23 555 577 555 577 0.97 17 30 0.0038 0.4 12.3 3.1 1 23 617 639 617 639 0.98 18 30 0.2 21 6.9 0.0 2 23 667 689 666 689 0.93 19 30 0.047 4.9 8.9 0.2 2 23 710 732 709 732 0.96 20 30 6.6e-05 0.0069 17.9 0.5 1 23 737 760 737 760 0.97 21 30 0.6 63 5.4 1.8 1 23 765 788 765 788 0.95 22 30 6.9e-05 0.0072 17.8 1.7 2 23 791 813 791 813 0.97 23 30 0.0031 0.33 12.6 2.0 1 23 894 917 894 917 0.97 24 30 0.029 3.1 9.5 0.5 2 23 990 1013 989 1013 0.96 25 30 3.2e-05 0.0033 18.9 0.1 3 23 1020 1041 1019 1041 0.94 26 30 0.00092 0.095 14.3 1.3 2 23 1046 1068 1046 1068 0.95 27 30 0.0012 0.12 13.9 1.4 1 23 1073 1096 1073 1096 0.97 28 30 1.8e-05 0.0018 19.7 6.3 1 23 1100 1123 1100 1123 0.97 29 30 0.0034 0.35 12.5 0.6 3 23 1131 1151 1130 1151 0.97 30 30 3e-05 0.0031 19.0 1.1 1 23 1157 1179 1157 1179 0.97
Sequence Information
- Coding Sequence
- ATGAATCTGCAGATTATATTCAACAATACCACACTGATTCCTTTCAAATGGAGAGGCAAATACCTTTGTTTTTTCTGTGGAGAGGACTTAAACGATTGCAACGAATTGAGGCAGCATACTAATGAACACGGCAGTTGTACAGACAAAGATAGAGCAATAAAATTAGTCAAATCAGGAGACGTTGAAGTGAAAATTGACGTTTCAGATATAACCTGCAAACTTTGCAACAAATCCTTCTCACTTTTCGACGACATTCTAACCCACCTTACCATCGATCACAAAATGCCTTACAACAAAGATGTCTCGCTATTTTTAAGTACATACCGACTAGTTGATCTCAAATGCGTGTTTTGTGATatacattttaactattttcataAACTTGTCTCTCATGTTAATCATACTCACCCAATCAACCATCTGCACTGTGAGGTTTGTCACCAGAAATTCAACAAAAAGAACGATCTCGATACCCATACTCGTGCCCGTCAtaggttaaaatatttttgtaagaaatGTCCTTTAATTTTTGATTCAAATACTGCGTTGCAAAAGCATAAAGCGAACTCACATGGTTCACTGTGCAACATTTGCTTCGAAGCGTTCCCTTCAGACCATAGTAGGGTAAGCCACATAAAAAAGGTTCATTTCGGAAACGACGTCTTACAATGCGgcttatgtttaaaaatattaactacgAAAATAGCATTTCTCAATCACGCTGCGAAATGTAACGTCAAAGATAATTGTGAGGAATACATCAAAACTGTCGTTAATGATAAAAAACCTACAGTAGCtcaaataagaaataatatcaCTTGCATTATTAATATGTCGACTGCTATACCTTTTAAGTTTTACATGAACAACTTCAGATGCTTTTATTGTATTAAAGATTTCACCGAATGTGATGATTTAAAAGAGCATACCGCCACGGAGCATCCGGTTTGTGACGTCAAACTTAAATGTATGCAACTCCGAAACAGACAGTCCGGCATAAGAGTAAAGATAGACGTGTCCTCGCTCTCTTGTAAAGTTTGTTTTGAGCCAATGCAAGATTTGGAACATTTGATAAACCACTTGGTAGTAGAACACAAAGCACCGTACGATAAGACGGTCGATCATCATTTCGAGCCATTCAAGCTGATCCAAGACAATTTTCCGTGTCCATTTTGTACTGAGCCGTATAGATATTTCTGTACTCTTTTGAAGCATGTAAGCGAGAGCCATTCCGAGAATAGGGCGATATGTCCTTATTGTGGCGTCACTTTTAGGACAGAATCCAATTTGCGATTTCATATTTCTCTTAAACACAATACTATTAGTTACAAGTGTAGTGCTTGTGACTTGAGTTTTCCAACAAGGCGGCACTTGCGGGAACATTCTGGTTCAGCCCACGGGAGTAAAGTGGCTGAATGTTCAGAGTGTTCGGAGAAATTTAAGTCCCCATACGCAGTACAGAGACATAAGATCGACGTGCATGGCATTGGACACAAATGTACCTACTGCGGTAGAATGTTTACTAAGAAATCCTTTATGGTAGACCATGTCCGACGATCACACCTTAAAGAGAAGAATGTGGAGTGCCCCGTCTGCTACCAAAGGTTTTTCAACAAGTACATGGTGAGCAGGCACATGGTTACTCATGTGGGCGAGAGAAATTTCCATTGCGATATATGCGGAAAAAAGTTCCTCTGGAAGAAAAATCTTATAGGGCACATGTCCACGCATTCAAAGAATGAAAATGCCCCGGCTCCTTACGGAGGGTGCGCCTCTGAGCGCCGGCGGAAAAACTTGAAAATACTATTCAACAACACCACGATCTTGCCTTTTAAGTGGAGACGCCGATTTCAATGTTTCTACTGTCCCAAAAACTACGCCGAATACAATGAGTTCAAAAAGCATACTAAATCACATGGCCTGTGTAGCACAAAAGATTATGCGTTGAAAATCATCAAAGGCGGTCACGTAGAaattaaaattgacgtttcgGAAATAACGTGCGAAATATGCAATGAACCTTTTGGAGACTGGCTGGAAATTGTTGATCATTTAATTATGAAACACAAAATGGAATTTGATAAAACAGTAGATATGCCACTACAGGCTTATAGGTTAGTTGACATGAAGTGTTTATTTTGTGAGGAAAATTTCACTTATTTTGGATATTTGATTAGTCATGTAAACGTGGCTCATCCTCAGAACTGCTACATTTGCGACGATTGTGGTGTGACATTCAATAAGAAACGAGATTTAGCTGTACATTTCCGGTCTTATCATCGCAAAGGCGGCTACCCTTGTGACCAATGCCCACTAATCTTTGAGAATTTCTGTTCCCGGCGTACTCATCGGAATAACGTTCACTACAGGAAATGTTCAAGTTGTAATCAAAAGTTTTCTACGCTTAGTTTGCTAAGGAAGCATATATTGACCGAACACCCTGATAATGGCAGTTTAACGTGTGACTACTGTGCCAAACTATGTCAATCTCTCCAAGGCTTGCGCCTACACAAAAGCAAGTGCCGAGTCAGAATGCTTTGCACTACCGATGAGGCTATAGATAGCTCTCTGTCTATTCTCCACGAGCCGAAGaagaaacaaaacataaaacaaataagAGAAAACATACACTGCATTCTAAACATGTCTACGGCGATACCGTTTAAATTCTTCTCCAAATATTCATGTTTTTACTGCTCAAAGAAATTTGTGGAATTCGATGACCTGAAATATCATACAGAGACGGAACATCCAATCTGTGATTTGAAATCAAAATCGATGAAGAAATGCAGAGGAGAaagaattaatgttaaaataagtatagCATCTTTGCTCTGTAAGGTTTGTTGCCAACCCATGGATGATTTAGATGTCCTGGTAGACCATTTAATTACAGAACACAAGGCGAATTACGACAAATCTGTCGTAGGTTGCTTAGAGCCGTTTAAAATCGTAAAAGACAACATACCGTGTCCACACTGCCCCGACCGTAGTTTTAGGTATTTTGGGATCTTACAACGGCATATGAACACCGAACACAgcaacaacaataaaatctgCGATTACTGTGGCCGAGCTTTTAAAAACGTTGCCAATCTCAAAGTACACATCTCGTACTCACATTCTGGGAATGCAGAGTGTAATATTTGCGGTATAAAGTATAAGAATCAATGGTGTCTCGCAAGGCACCGTGCTAAGTCTCATGATGCTAAAGACTATAAATGCTCGAAGTGTCCAGAACTTTTTCGGTCCCAGTACGACAAGCAAAAGCATTTGATAAGAGTGCATGATATCGGGCACAAGTGTGAGCACTGTGGGAAGATGTTCACTAGAAATTCGTTTATGAAGGATCATATACGGAGAACACATTTGAAGGAGAAGAATGTTGCTTGCACTTTATGTAGCGAAAGGTTTTTTGACAACTATCTATTGAGAATGCATATGGTGAAACATGAAGGAGAAAGGAAGTTCGCTTGCAGTGTTTGCGGCAAAGCGTTTTTGAGGAGAAGCAACCTCCACTCTCACATGGAAATGCATAAAAAGTATGGTCATGCGATTGGGTTGCTGCAAGACATAATATAA
- Protein Sequence
- MNLQIIFNNTTLIPFKWRGKYLCFFCGEDLNDCNELRQHTNEHGSCTDKDRAIKLVKSGDVEVKIDVSDITCKLCNKSFSLFDDILTHLTIDHKMPYNKDVSLFLSTYRLVDLKCVFCDIHFNYFHKLVSHVNHTHPINHLHCEVCHQKFNKKNDLDTHTRARHRLKYFCKKCPLIFDSNTALQKHKANSHGSLCNICFEAFPSDHSRVSHIKKVHFGNDVLQCGLCLKILTTKIAFLNHAAKCNVKDNCEEYIKTVVNDKKPTVAQIRNNITCIINMSTAIPFKFYMNNFRCFYCIKDFTECDDLKEHTATEHPVCDVKLKCMQLRNRQSGIRVKIDVSSLSCKVCFEPMQDLEHLINHLVVEHKAPYDKTVDHHFEPFKLIQDNFPCPFCTEPYRYFCTLLKHVSESHSENRAICPYCGVTFRTESNLRFHISLKHNTISYKCSACDLSFPTRRHLREHSGSAHGSKVAECSECSEKFKSPYAVQRHKIDVHGIGHKCTYCGRMFTKKSFMVDHVRRSHLKEKNVECPVCYQRFFNKYMVSRHMVTHVGERNFHCDICGKKFLWKKNLIGHMSTHSKNENAPAPYGGCASERRRKNLKILFNNTTILPFKWRRRFQCFYCPKNYAEYNEFKKHTKSHGLCSTKDYALKIIKGGHVEIKIDVSEITCEICNEPFGDWLEIVDHLIMKHKMEFDKTVDMPLQAYRLVDMKCLFCEENFTYFGYLISHVNVAHPQNCYICDDCGVTFNKKRDLAVHFRSYHRKGGYPCDQCPLIFENFCSRRTHRNNVHYRKCSSCNQKFSTLSLLRKHILTEHPDNGSLTCDYCAKLCQSLQGLRLHKSKCRVRMLCTTDEAIDSSLSILHEPKKKQNIKQIRENIHCILNMSTAIPFKFFSKYSCFYCSKKFVEFDDLKYHTETEHPICDLKSKSMKKCRGERINVKISIASLLCKVCCQPMDDLDVLVDHLITEHKANYDKSVVGCLEPFKIVKDNIPCPHCPDRSFRYFGILQRHMNTEHSNNNKICDYCGRAFKNVANLKVHISYSHSGNAECNICGIKYKNQWCLARHRAKSHDAKDYKCSKCPELFRSQYDKQKHLIRVHDIGHKCEHCGKMFTRNSFMKDHIRRTHLKEKNVACTLCSERFFDNYLLRMHMVKHEGERKFACSVCGKAFLRRSNLHSHMEMHKKYGHAIGLLQDII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00075766;
- 90% Identity
- iTF_00075766;
- 80% Identity
- -