Ahor007146.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963576865.1
- Location
- OY756391.1:21590389-21618737[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 2.6e-75 1e-70 239.5 18.7 1 268 129 393 129 412 0.90 2 7 1 4e+04 -41.7 72.8 1 249 413 663 413 667 0.49 3 7 1 4e+04 -15.9 37.5 109 259 586 729 584 738 0.78 4 7 1 4e+04 -18.0 38.7 109 257 642 783 638 792 0.73 5 7 1 4e+04 -17.7 37.0 109 251 782 917 778 925 0.67 6 7 1 4e+04 -23.6 46.9 109 290 810 984 808 989 0.61 7 7 1 4e+04 -10.7 28.7 109 238 922 1051 920 1052 0.77
Sequence Information
- Coding Sequence
- ATGGGCAGAATTACGAATATGGCAACACCTACCAACAGTGATGTGGAGAGCGCTGGTGACGCCTTCACTGATGGTGATTTTGATGACAGCGATGAAGAAACAGTCGTAGAAAGGAGTGAGGATTCTCCGAAATCTCAAATTCCCGTGAACGAAACTGTTAATGCAGATGTCAAGAATAATTTTCACAATGGTTCAAGTGATATTTCAGCACATGCTAATGGTCTGGAACATCAACAAAGAATTAACGGCCTAAAAAACGGTGATAAGGAACTGTGTAGTGCTGTAGAGTGTCACAGTAATGGTGATGTGGTCGAATTTCGAAGGGACTCTCATGGTGATCAAAATCCCTCTATTGTTGGAATCATTGGAGATCAACATAATCATGCAGAACAGCGTCTCGCAGCGAGGCGGGCCGCACGGGCGGAGGCGCGGGAGATCCGCATGCGGGAGCTCGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCAGACAAAGCGTACGATATGTACGCGGGCAAGCTGCCTGAGACTGTAGGGGGCAGGCGGGGCGGGTCGCGGCTGGCGGCGCTCAGCCCCGGCGGGCTGCACTCGCCTCGGAGGAGTTCGGAGGACTCCGCCGATGACGTCTTCAACATCAAAGATCTCAGGCACGAGCTGAAAGAAGTCGAGGAGAAATTCCGCAAGGCGATGATCCTGAACGCGCAGCTAGACAACGATAAAGCGGCACTCGGTTACCAGCTGGAGCTGCTGAAAGACCGCATCGAGGAGCTACACGAGGAGCACGCGCAGCTCTCGcGCGAACACAGAGAAAAATGCTCGTCACACGAACGACTGCGACGGGAGCACTTGTCGCTCGAAAACGAAGTGGCGTGCGCCCGGGACGCCGTGAGGGCGCGggacgccgccgccgccgccgccgggttCGCCTTCGTGGAGGCGGGCGCCGCCGCCGACGTGCCGGGCTTCGGCGCCGTGCCGCCGCTGGCGCTCGTGTCGCGGCAGGCCGACCAGCTGCTGGGCGACGCGGCTGAGGGGACGCTCGACGTCCGGTTGCAGAAGCTGCTGAACTCGAAGCAGTCGCTGGAGTCGGAGGTGCGCAAGCTGAAGCTGCAGCTGCACGAGGAGCGCGCCGCGCGCCAGAACGGCGCCGCCAGCCACCACGACCAGGAGTACGAGACTGAGCTGGAGACCCTTCGACGTGGCCTGACAGAGGCGAAAGCTCGCGCAGCCCGAGCGGAAGCCGAGGCCGCACTGCAGGCGGCCGGCGCCGCGCGCCTCGAGGCGCAGGTAGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGTGGCGCGGCTCAAGGCGCGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGCGCGGGAGGCCCTCAACCGGGTGGAGGAGCTGGAGACGGAGAACAGCCACCTCACGAAGCGGCTCGACAAGCTCAAGAACGCCAAGTCCGCGCTACTCAAGGAGCTGTGA
- Protein Sequence
- MGRITNMATPTNSDVESAGDAFTDGDFDDSDEETVVERSEDSPKSQIPVNETVNADVKNNFHNGSSDISAHANGLEHQQRINGLKNGDKELCSAVECHSNGDVVEFRRDSHGDQNPSIVGIIGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKLPETVGGRRGGSRLAALSPGGLHSPRRSSEDSADDVFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEHAQLSREHREKCSSHERLRREHLSLENEVACARDAVRARDAAAAAAGFAFVEAGAAADVPGFGAVPPLALVSRQADQLLGDAAEGTLDVRLQKLLNSKQSLESEVRKLKLQLHEERAARQNGAASHHDQEYETELETLRRGLTEAKARAARAEAEAALQAAGAARLEAQVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEEPLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREVARLKARQDHQDEHEELLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -