Ahor017136.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- -
- Assembly
- GCA_963576865.1
- Location
- OY756401.1:898417-905331[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-10 7.1e-08 33.1 0.0 4 39 148 184 145 188 0.90 2 4 1.4e-10 5.1e-08 33.6 0.3 2 39 200 237 199 240 0.92 3 4 1.8e-14 6.7e-12 46.0 0.1 2 45 255 299 254 299 0.96 4 4 4.6e-17 1.7e-14 54.3 0.0 1 39 306 345 306 350 0.93
Sequence Information
- Coding Sequence
- ATGCCAGGACACGGCGTGTCTCAAGTTAAATGTGAGCCGCAGTCGGACGAAGACGACAGTGACTCGCAGTACTCGCTCGGCTACTTGACCAATCAGACGGGATTGGAAGAGTTGGCCCCGCCAGCACCGGCGGGCCCCGCCGCCACGCCCGTGTGCGTCAAGCAGGAGCCGCCCGACGCGCCGCCCGCGCTCACCCTGGAGAACCTGGAGCCGGCGCACAACGCTAACTCCACGGGTTCTACGCTGTTGGATCGACACATGGCGATGCTCAGCCACACCGAATTGTCTGACTCATCGGACTTCATGCCGCTGATGGCCGTCAAAGACGAACCTCTGTCTGAAGGAGAGCAACAACAGTTAATCGGCGAGGATTCCAGCGACTCATGTAGTCAGACGGAGCTGGCACACCCTCGCTCGAGCCCCAAGAGCTGGACTCAAAGGGACATGGACAACGCTCTAGACGCACTTAGGAATCGGAACATGAGCCTCACAAAGGCATCAGCGACATACGGGATCCCGTCCACGACGCTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCCAAGAAGGAGGGCGCCTCCAAGTCCTGGAGCGAGGCCGACCTGCGCGGCGCGCTGCATGCGCTGCGCGCCGGCGCCATCTCCGCCAACAAGGCCAGCAAGGCATACGGCATTCCCAGCAGCACTCTATACAAAATTGCCAGACGCGAGGGCATTCGCCTGGCAGCCCCGTTCAACGCTGCGCCAACCGCTTGGCGGAGAGCGGACTTGGAACGGGCGTTGGCTTCGATCCGCTGCGGCGCTGCTAGCGTCCAACGAGCCGCCTCGCAGTATGGGATACCTACGGGCACATTATATGGCCGGTGTAAACGAGAGGGCATTGAACTGTCTCGTTCCAATCCTACCCCGTGGTCTGAAGATGCAATGGGAGAAGCACTAGAAGCTGTCAGGGTGGGTCAAATGTCGATAAACCAGGCGGCGATCCACTACAACCTACCCTACTCGTCGCTGTATGGCCGGTTCAAGAGATTTCATTCCGGAAACAAGTTTCAGACACAGAACCTGCAACATATACAACAGCAGGAGGCCCAGAAAACAGTTGAAATTGATCATCAAAACCACCCCACAGAGATGTACTACCAACAACCTTTACAGGGCCACGCGATACACATCCCCGATGAAACTTCAATCGTACAGAACCAGTACTACCACAACAACCCCGTAAACGAAGTCCCAATGCACAATAATGTTCTACACGAACAGTACTACGCAGGGCAAGCGATGTATTTCAGCCAGAATTGTAACAGCATCGCGACCAGTTGA
- Protein Sequence
- MPGHGVSQVKCEPQSDEDDSDSQYSLGYLTNQTGLEELAPPAPAGPAATPVCVKQEPPDAPPALTLENLEPAHNANSTGSTLLDRHMAMLSHTELSDSSDFMPLMAVKDEPLSEGEQQQLIGEDSSDSCSQTELAHPRSSPKSWTQRDMDNALDALRNRNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALASIRCGAASVQRAASQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRFHSGNKFQTQNLQHIQQQEAQKTVEIDHQNHPTEMYYQQPLQGHAIHIPDETSIVQNQYYHNNPVNEVPMHNNVLHEQYYAGQAMYFSQNCNSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01502894;
- 90% Identity
- iTF_00075396;
- 80% Identity
- -