Afus017692.1
Basic Information
- Insect
- Anania fuscalis
- Gene Symbol
- -
- Assembly
- GCA_950371115.1
- Location
- OX493335.1:3940243-3952318[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 9.2 8.9e+02 1.7 0.2 1 23 89 112 89 112 0.88 2 18 0.36 35 6.2 0.1 3 23 117 137 115 137 0.96 3 18 0.0017 0.16 13.5 0.2 2 23 141 163 140 163 0.89 4 18 6.3 6.1e+02 2.2 6.3 3 23 168 189 166 189 0.94 5 18 0.038 3.7 9.2 1.4 2 23 371 393 370 393 0.96 6 18 0.046 4.4 9.0 0.0 1 20 401 420 401 422 0.95 7 18 0.014 1.4 10.6 0.9 3 23 433 453 432 453 0.97 8 18 1.9 1.9e+02 3.8 0.6 1 23 469 492 469 492 0.91 9 18 0.1 10 7.8 1.1 1 23 501 524 501 524 0.91 10 18 0.13 13 7.5 0.4 2 23 602 624 601 624 0.82 11 18 9.4e-06 0.00091 20.6 1.6 1 23 658 680 658 680 0.98 12 18 3.7e-06 0.00035 21.9 1.6 1 23 687 709 687 709 0.98 13 18 8.4e-05 0.0081 17.6 2.3 1 23 714 736 714 736 0.96 14 18 0.00028 0.027 16.0 0.3 1 23 742 764 742 764 0.98 15 18 3e-05 0.0029 19.0 1.1 1 23 770 792 770 792 0.94 16 18 0.00054 0.052 15.0 2.6 2 23 799 820 799 820 0.98 17 18 0.00029 0.028 15.9 0.5 2 23 829 851 828 851 0.97 18 18 0.00043 0.042 15.3 0.2 1 23 856 878 856 878 0.98
Sequence Information
- Coding Sequence
- ATGTCTTCAGATGAATCTGACGACGAACCCTTATCGGTGTTAGCTGCTGCTAAAAAGTTAAATCCGGAGGACTTCGAAGGACTCGAAGAAACAACAATCGAGGTGGTCTCTCCATCAAAAAAGAAGAGAAAAAAGTACCAATTAGATGATAATGTTTCTATTACCATCAAGCTACGCCCTCCAAGCGACATACGTGGCCCGAAGGTGGTTGAAAGACCTACAGATGTGTGGATGTACATAAAGGACCTGAATCCTACTGGGCCCTATAGCTGTTTGCTTTGCTCAGAGTGGTTCATAAACAGGTCCAAAGTTATTCTGCACTATGTGCTAAACCATAAGAAAGATTTCTGCGGAATCTGCAGATATTTTGTGGCAGAAAGAGATGAATGGCAAGCCCATATGAACTTTCACACACCATGGCCATGCTCGCAATGTTCTAAGAATTTCGTAACTGAGGCAGAGTTGAGGAAGCATTTCAGCGCTGTACACAATCTTGTCCACTGTCGTCTATGCCACTTCAGAACCACTGATGATGAGCATTATGAAAAACACTTGCGAGATAAACACAACGTAACAAATGCAGCCAGTAAAAACGCAGATAGCCTCTGGGAGGTAGAATATGAAGGCTGCCCAAATTTTCTATGCCTACTGTGTTCAAAAGGAGACATTTTATCCTCCACATTTTTTAACCATTACATGGGCTACCACCATTTCACACTCAAGTGTATCACAAACATAATATCTGGCACTGATCCTCCTTTTACTGTAGATGGTGCTAATGTGAGTACTGAGTTTGTTAGTGACCagtttaaaatgaaaacagGCTACCTGGATCTAGAGAAAAAAACGGAAAATGAAAGTGAATTACTTATAAAGCAGGAAATGTTAAGTGATACAGAGAATAATGAGGAAAATAATGACAAGGATAGCATTGTGGAAACTTACAAAGGTGATGAAGATTTTGATGTAACATTAATGGAGTTGATTGTGCTGCAAAAGTGTTATTTTGACTATGTAAATTATACGCTGAACCAGATAAATTCGAATAGTGTACCTGAAGACTCcgttataaattacaaaaatggaAACGAAGATCTCGAATTGGATGTTGAATGTGGCCTTTGCAAGACATGTGTTACTTCAGTTCAGTCTTTTGCAACACATATGCGTAAGATGCATTCGGTTAAATCCGTACCAATTTATTCTTGTAGAGTTTGTGCTACTACATTTGATAGTCTTGCTGAACTTGAAGCTCATGTTACCGAAGAAATGGGCGAGTTTGAGGACTTGTGGCTATGCCAGTTTTGTGACAAGGAGTTTGATAGTAGGGAGGCTACGAGAAAGCATTTGAATGATCATTTAGATGGTATGGAGTATGACAATTGTTTTAGTCCACACCTCGGTTTTAAATGCAGATACTGCCCTACTTTGTTTTGGAATGAGACAGATAGAGAAACACATCAAATAAGAGTGcattataataagtataatgAAGACTTCTATAAGTGTGAAAGCTGTTTAGAGATATTTAGTGATAAGaTTTGGTTCATACATCACTATGTAGAAAAACATCAGGCGGTACAAGAGGTGCTATTCCTAGTGAAATGCTGCATATGTTGCCTTGTGCTACCCAACGTTGAAGATATGCGGACACATTTTGAGCAGAACCACAGTGAAGCTAAGAAGATCTTCTGTTCCTTGGGCGCTTGTGTGTATAGACCACTGAGCCAGAGGAAGTCATTTAAATTGCATGTGAAGACAGTGCACGCATCCGAAAGCCCTAAGAAGCCGGCATGCGTAGACAGCTGTTCGATTTGCGGCCGCGAGTTTAATAGCGCTCGCGCTTGCGGCACGCACATGGCGCAGGCGCACGGCGCGCGCAAGTTCAAGTGCAAGCTGTGCCGCGATGTGCTGCATACTGTGGACGAGAGGAAACTCCACTACCTGATCCGGCATCCAGGCAAGCATCCGTACGAGTGCACAGAGTGCGGCAAGTCGTTCCAGTACAAGTCCTCGCTCTATATGCACAAGCAAGTGCATGCGCCGAACAAGCCTACCTACACCTGCACTTATTGCGGAAAAGTTTTTATGAAGAAGGATTCGTTCCGCGAGCACCTCCAGATCCACGAAGGGCCGCGTCACGCGTGCTCGTACTGCCCGATGCGCTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGCCGCCACACCGGCGAGCGGCCCTACGCGTGTCCTGAGTGCCCGCGCACCTTTGCAGATAAGGGTGCCTGCACATCGCACGCCAGGACACACACAAAAGACACATCGTATGCGTGTATCTACTGCGGACAGACGTTCGTTCAGAAATCCAAGCTAACTTATCACATTAGAAAACATACGGGAGAGAACCTAGAGACGTGCACAGTGTGCTCGAAGCTGTTCACGAGTGCTTGCTCCCTACGCGAGCACATGAAGATCCACGACCGCCACACCAAGGTGCCGGTCCAGTGCCCTCTATGCGACCGGAAGTACCAAGACGAGCGCTACATGATGCGTCACATTCGGACGTCGCACACGCACATCCGGTACACGTGTCCGCTCTGCCGGAAAACGTTGACCAGTTCCGCTGGTCTGCGGCTCCATGTCGTCACTCATGGGAAGGCTAACATGTACAAGGTATAG
- Protein Sequence
- MSSDESDDEPLSVLAAAKKLNPEDFEGLEETTIEVVSPSKKKRKKYQLDDNVSITIKLRPPSDIRGPKVVERPTDVWMYIKDLNPTGPYSCLLCSEWFINRSKVILHYVLNHKKDFCGICRYFVAERDEWQAHMNFHTPWPCSQCSKNFVTEAELRKHFSAVHNLVHCRLCHFRTTDDEHYEKHLRDKHNVTNAASKNADSLWEVEYEGCPNFLCLLCSKGDILSSTFFNHYMGYHHFTLKCITNIISGTDPPFTVDGANVSTEFVSDQFKMKTGYLDLEKKTENESELLIKQEMLSDTENNEENNDKDSIVETYKGDEDFDVTLMELIVLQKCYFDYVNYTLNQINSNSVPEDSVINYKNGNEDLELDVECGLCKTCVTSVQSFATHMRKMHSVKSVPIYSCRVCATTFDSLAELEAHVTEEMGEFEDLWLCQFCDKEFDSREATRKHLNDHLDGMEYDNCFSPHLGFKCRYCPTLFWNETDRETHQIRVHYNKYNEDFYKCESCLEIFSDKIWFIHHYVEKHQAVQEVLFLVKCCICCLVLPNVEDMRTHFEQNHSEAKKIFCSLGACVYRPLSQRKSFKLHVKTVHASESPKKPACVDSCSICGREFNSARACGTHMAQAHGARKFKCKLCRDVLHTVDERKLHYLIRHPGKHPYECTECGKSFQYKSSLYMHKQVHAPNKPTYTCTYCGKVFMKKDSFREHLQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPECPRTFADKGACTSHARTHTKDTSYACIYCGQTFVQKSKLTYHIRKHTGENLETCTVCSKLFTSACSLREHMKIHDRHTKVPVQCPLCDRKYQDERYMMRHIRTSHTHIRYTCPLCRKTLTSSAGLRLHVVTHGKANMYKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00076829;
- 90% Identity
- iTF_00076829;
- 80% Identity
- -