Afus031877.1
Basic Information
- Insect
- Anania fuscalis
- Gene Symbol
- -
- Assembly
- GCA_950371115.1
- Location
- OX493352.1:6492167-6495912[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.023 2.2 9.9 0.7 1 23 69 91 69 91 0.98 2 27 0.88 85 4.9 0.0 3 23 118 139 116 139 0.93 3 27 0.039 3.7 9.2 2.9 2 23 162 184 161 184 0.96 4 27 0.001 0.097 14.2 6.9 3 23 192 213 191 213 0.97 5 27 1.5 1.5e+02 4.2 0.4 3 23 220 241 219 241 0.96 6 27 0.28 28 6.5 1.7 1 23 245 268 245 268 0.97 7 27 0.00047 0.045 15.2 2.6 2 23 275 297 274 297 0.96 8 27 0.079 7.6 8.2 0.0 3 23 305 325 304 325 0.95 9 27 7.1e-05 0.0069 17.8 1.8 1 23 331 354 331 354 0.96 10 27 0.0013 0.13 13.8 4.5 1 23 412 434 412 434 0.99 11 27 0.76 73 5.1 1.0 3 23 461 482 459 482 0.95 12 27 0.36 35 6.2 0.7 2 23 505 527 504 527 0.94 13 27 0.0012 0.12 13.9 0.0 1 23 532 555 532 555 0.95 14 27 0.74 71 5.2 2.3 1 11 560 570 560 583 0.79 15 27 0.00039 0.038 15.5 2.2 1 23 618 641 618 641 0.97 16 27 0.0077 0.74 11.4 0.5 2 23 648 669 647 669 0.96 17 27 0.00087 0.085 14.4 1.8 1 23 675 697 675 697 0.99 18 27 0.65 63 5.3 0.1 1 12 703 714 703 716 0.91 19 27 0.0004 0.039 15.4 0.5 1 23 780 802 780 802 0.98 20 27 0.084 8.1 8.1 0.1 2 23 828 850 827 850 0.96 21 27 0.041 4 9.1 1.0 2 23 873 895 872 895 0.95 22 27 0.044 4.3 9.0 7.6 3 23 903 923 902 923 0.97 23 27 0.02 2 10.1 1.1 2 23 929 951 928 951 0.95 24 27 0.37 35 6.1 0.6 1 23 955 978 955 978 0.98 25 27 0.00021 0.021 16.3 0.8 2 23 985 1007 984 1007 0.96 26 27 0.0016 0.15 13.6 0.4 3 23 1015 1035 1013 1035 0.96 27 27 0.00024 0.024 16.1 2.1 1 23 1041 1064 1041 1064 0.97
Sequence Information
- Coding Sequence
- ATGTTTGTTATGCAACTGATCTCTCCTGTCATAATATGCAAGAAAGGCATCGGCAAGAGACGAGAATCAAAGAAAACTGAAGCCGACGTCGCGCCCGAAATGAAGAGACCCAAAACACAGAACAAAATGGCTATAATGAGGCAAAATGTTTTAGAGGTGCTTTTAAAGTCGACTGTCCTCCCTTTCCGATGGCTGAAGAGTTCTTTCAGATGTTTCTACTGTTACGACGTTTTCCAGGAGCCAAAAGATCTTAAAGTGCACCAAATGATACATACAAGCGATGATGATAAACTAAAAGCTATGAAAAACTATTGGGAGTCGACAGTGTATGTAGATATTTCGAATCTGGCGTGCAAACTTTGTCCAATGATTATCACAGATTTTTACAAACTAATAGACCATTTAATGGAAGTACATAACATGCAGTTTAATAAAGATATCGGGATTTGTATGAATCCATTCAGATTGAACCACATATCGGTTCAGTGCGTGCAATGTGACAGAGAGTGCAGGACCTTCGGCCATCTGCTAGTCCATACAAATAAAGAACACAAAGGTTGCTCGCAGGTGCTCTGTGAGTTCTGCGGTCAGCACTTCAAAAGTAATCACCATTTGCGCGATCATATGAACAAAGAACACACGAACAGATCAGTGCTGTGCCCGTTGTGTGGCGAGGAAATACACAGCGCGAATCGGATGAGAACTCACATGCAGAATGTTCACAATAAAAGATACAAGTGCGGAATGTGTTCAGAGTTGTTTGATACGCATTATAAGAGATCTCGACATGTGATGGTCGTGCACAAAACTAGAGAAGAAGTCAAATGTCAACACTGTCCGAGGACTTTTGTCTTTAGAAGCACGATGATGAGGCATGTCAGAGAGACACATCTTCAAGAGAGAAATGCTATATGCGGAGTTTGTGGGTGGAGGGCTTTCGGCGCGGGTAGATTACAAAGACACATGATGAAACACAGCAATGAAAGGAACTTCAAGTGTCCAGCGTGTGATAAAGCGTTCAAAACTAAGAAAACCATGAAGCAACACTACAATAACATTCACGAAAAAGGTGCTAGGGTCCATGATCTGATGCCGGGGGAAACGAAAGGAAAACGGAAATCATCAAAACTGGCGAAGAGAACTAAAGTGAGCAAACAGTTGCAACTAAGGAAATGGTTGCAGACAATCCTGCAGAACTCGACAGCGATGCCTTTCCGGATATACGGAAATAAGTACCGATGTTTCTACTGCACCTCAAGCTTCAGCCACTCGGGAGACTTGAGAGATCATTCGAAGACTCATGAGAACGTCAACTTAGTAAAGACCATCAGAACTAGTGTTACAACACTTGTAGCAAAACTGgatatttctgaaataaattgtaaactATGCTCTCATAATTTAAACGATTTGCGTGAGTTATTAGAACACTTACAAAAAGAGCACGATTTAAAATGTAGTTCGGAAGCTTTGGATTACGTTTTGTGTTTCAAATTGTCTGATGACGATCTCAAATGCTTGCTGTGTGAAGAGAGTTTCTCATACTTTGGTCCGTTACTGCTTCATACTCATAGAATACACAATCAAAGGCCTTACATTTGCGAAATTTGTGGCATCAGTTTTGGCGCTAAGGGTGCTTTGGAGAAACACTCCCAGAGCGTTCATCCAACGAAGAGTTATCAATGCAGGCATTGTGAGAAGAAATTCACCGCAGTTCATCGTAGAGATAACCACGAAAAACGAATTCATGATGAGACCGAACGCAAGTGTCATATCTGCTCGGAAATTCTAGGAAGTATTTATATTAGGGACACGCATTTAGCAACTGTGCATAATATTTGGAAGTCTGAATTCAAGTGTGAAGTTTGTTCACAGATGTTTAGGTATAAATATCTTCTAGTCACTCACAAGAAGCGAGTACATTTGAAAGAGAAGAATATGACGTGTGATGTGTGCGGTGACAAGTTCTTTGATAAACGTTTGCTGAATCTACACATGGTGAAACATAGTGATACAAAACCGTTCAAGTGTGAGACGTGCCAGAAGAGATTTCTTAGAAAACGGGGCCTAGAAATCCACACAAGAATTCATACGAACGATAAGAGATACGTTTGCAAACTTTGTTCTAAGGCTTTCGTACAAATGGCAAAAAGCAAAGGAGCTGTCAAGAAAAAAGAACGGATTTGTAAAGAAGACTATGTTTCAACCAGATCCCGAAGGACTATTAAAGAAGAGGGACCTGGAAACCCAGATGAACGAACCAGAATAATGAGGGAGAATGTTATCCAAGTGCTGAAAAACTCGACTGTGATGCCGTTCAGGTGGCTGAAGAGTTCTTACCGTTGCTTCTACTGTTACGAGGTCTTCGAAGAACCGAAAGACCTCAAAAGCCACCAAGAAGTCCACATAAACGATGATACTAAACTCAAATGTATGGAAAACTACTGGGATTCGTCAGTTCACGTCGATGTCTCGTCCATATCCTGCAAACTTTGTCCAAAAAGTATGAGCGAATTCTACGAACTGATCGACCATTTGATCACATCGCatgaaatagtttttaacaAAGACATCGGAAGCTGTATGAACCCTTACAAATTGAACAATATTTCAGTACAATGCGCGTTCTGTAGTCAAGACTACCGAACCTTTGGACATTTGCTGCTCCATATGAACAATGAACATAAGGGATATTCCCAACTGCTTTGCGACGTATGCGGACGGCACTGCAGGAACAAGAATCACTTAAGAGAACATAAGAAGGAACATATAAACAGATCTGTCACATGTTCTATTTGTGGGGAGACTTTAAGCAGCTACCATAAACTCCGGCCGCACATGCAAAACTTCCACGATAAGAAATACAAGTGCGCCGCTTGTCCTGAGCTATTCGAGACGCATTATAAAAGAGCATTGCATATGATGACGGTGCACAAAAGCAGGGAAGAGATCAAATGTCAGTTCTGCCCGAAAACCTTCGTGTTTCGTAGTGCGATGATGACGCATCTACGGGTAACGCATTTGCAAGAAAAGAATACGATTTGCGGCGTCTGCGGATGGAGGACCGCGGGGAAAAACAAGTTGAAGAGACACATGTCAAAACATAGTAATGAAAAGAACTTCAAATGTGCGGTGTGTGAGAAAGCGTTTAAGTCTAAGAAGAATATGGTGCTGCATCATAGAAATGTTCATGAAAAGGAGATGCAAATGCCACATGTTTTTCCTAGTAGTTTAGCACCGGAAATACGTCCCCCTATGATTTAA
- Protein Sequence
- MFVMQLISPVIICKKGIGKRRESKKTEADVAPEMKRPKTQNKMAIMRQNVLEVLLKSTVLPFRWLKSSFRCFYCYDVFQEPKDLKVHQMIHTSDDDKLKAMKNYWESTVYVDISNLACKLCPMIITDFYKLIDHLMEVHNMQFNKDIGICMNPFRLNHISVQCVQCDRECRTFGHLLVHTNKEHKGCSQVLCEFCGQHFKSNHHLRDHMNKEHTNRSVLCPLCGEEIHSANRMRTHMQNVHNKRYKCGMCSELFDTHYKRSRHVMVVHKTREEVKCQHCPRTFVFRSTMMRHVRETHLQERNAICGVCGWRAFGAGRLQRHMMKHSNERNFKCPACDKAFKTKKTMKQHYNNIHEKGARVHDLMPGETKGKRKSSKLAKRTKVSKQLQLRKWLQTILQNSTAMPFRIYGNKYRCFYCTSSFSHSGDLRDHSKTHENVNLVKTIRTSVTTLVAKLDISEINCKLCSHNLNDLRELLEHLQKEHDLKCSSEALDYVLCFKLSDDDLKCLLCEESFSYFGPLLLHTHRIHNQRPYICEICGISFGAKGALEKHSQSVHPTKSYQCRHCEKKFTAVHRRDNHEKRIHDETERKCHICSEILGSIYIRDTHLATVHNIWKSEFKCEVCSQMFRYKYLLVTHKKRVHLKEKNMTCDVCGDKFFDKRLLNLHMVKHSDTKPFKCETCQKRFLRKRGLEIHTRIHTNDKRYVCKLCSKAFVQMAKSKGAVKKKERICKEDYVSTRSRRTIKEEGPGNPDERTRIMRENVIQVLKNSTVMPFRWLKSSYRCFYCYEVFEEPKDLKSHQEVHINDDTKLKCMENYWDSSVHVDVSSISCKLCPKSMSEFYELIDHLITSHEIVFNKDIGSCMNPYKLNNISVQCAFCSQDYRTFGHLLLHMNNEHKGYSQLLCDVCGRHCRNKNHLREHKKEHINRSVTCSICGETLSSYHKLRPHMQNFHDKKYKCAACPELFETHYKRALHMMTVHKSREEIKCQFCPKTFVFRSAMMTHLRVTHLQEKNTICGVCGWRTAGKNKLKRHMSKHSNEKNFKCAVCEKAFKSKKNMVLHHRNVHEKEMQMPHVFPSSLAPEIRPPMI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01125682;
- 90% Identity
- -
- 80% Identity
- -