Afus012954.1
Basic Information
- Insect
- Anania fuscalis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_950371115.1
- Location
- OX493330.1:20571336-20599392[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.8e-62 3.6e-58 198.3 7.6 1 222 123 341 123 348 0.93 2 6 1.9e-14 2.4e-10 41.3 1.3 202 268 541 607 534 626 0.83 3 6 3 3.8e+04 -84.7 101.8 1 159 627 808 627 981 0.53 4 6 3 3.8e+04 -19.0 21.0 23 75 959 1012 928 1055 0.51 5 6 3 3.8e+04 -45.9 55.2 127 256 1083 1217 1022 1245 0.44 6 6 3 3.8e+04 -14.7 17.3 127 171 1293 1322 1270 1350 0.41
Sequence Information
- Coding Sequence
- ATGGGCAGAATTACGAAGATGGCAACACCTACCAACAGTGATGTGGAGAGCGCTGGTGACGCCTTCACTGATGGTGATTTTGATGACAGTGATGAAGAAACAGTCGTAGAACAGAGTGAGGCTTCTCCTAAGTCTCAAATTCATGTGAATGAAACTGTGAATGCAGACGTCAAGAATAATCTTCACAATGGCTCAACTAATGGTCTGGAACATCAGCCAAGGGTTAACGGACTAAAAAACGGTGATAAGGAACTGTATAGTGCTGTGGAGTGTCGCAGTAACGGTGATGTGGTCGAATTTCGAAGGGACTCTCATGGTGATCAGAATCCTTCTATTGTTGGAATCATTGGAGATCAACATAGTCATGCAGAGCAACGTCTCGCGGCGCGGCGGGCCGCACGGGCGGAGGCGCGAGAGATCCGCATGCGGGAGCTCGAACGGCAGCAGCGGGAACAGGAGGACCATGCGGACAAGGCGTATGATATGTACGCGGGCAAGCTGCCTGAGAGCGTGGGCGTCAGGCGCGGCGGGTCGCGGCTGGCGGCGCTCAGCCCGGGCGGGCTGCACTCGCCTCGGAGGAGCTCGGAAGACTCCGCCGATGACGTCTTCAATATCAAGGATCTTAGGCATGAGCTGAAAGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATACTGAACGCGCAGTTGGATAACGACAAAGCGGCGCTCGGCTACCAGCTCGAGCTGCTGAAGGACCGCATCGAGGAGCTGCACGAGGAGCACGCACAACTATCGCGTGAACACAGAGAGAAATGCTCATCACACGAACGATTACGGCGCGAACACGCATCTTTAGAAAACGAAGTGACGTGCGCGCGAGATGCCGTCCGCGCGAGAGACGCAGCCGCCGCGGCCGCCGGGTACAACTTTGTAGAGGCGGGCGCCGAAGCAGACGTGCCCGGCTTCGGCGCGGTGCCGCCGCTGGCGCTCGTCTCGCATCAAGCGGACCAGCAGCTGGGAGACGCCTCTGAGGGCACGCTAGGTAAGGGAGATAATGCCTTTGTGGAGGCGGGCGCCGTAGCAGACGTGCCCGGCTTCGGCGCGGTGCCGCCGCTGGCGCTCGTCTCGCATCAAGCGGACCAGCAGCTGGGAGACGCCTCTGAGGGCACGCTAGGTAAGGGAGATAATGCCTTTGTGGAGGCGGGCGCCGTAGCAGACGTGCCCGGCTTCGGCGCGGTGCCGCCGCTGGCGCTCGTCTCGCATCAAGCGGACCAGCAGCTGGGAGACGCCTCTGAGGGCACGCTAGGTAAGGGAGATAATGCCTTTGTGGAGGCGGGCGCCGTAGCAGACGTGCCCGGCTTCGGCGCGGTGCCGCCGCTGGCGCTCGTCTCGCATCAAGCGGACCAGCAGCTGGGAGACGCCTCTGAGGGCACGCTAGGTAAGGGAGATAATGCCTTTGTGGAGGCGGGCGCCGTAGCAGACGTGCCCGGCTTCGGCGCGGTGCCGCCGCTGGCGCTCGTCTCGCATCAAGCGGACCAGCAGCTGGGAGACGCCTCTGAGGGCACGCTAGGTAAGGGAGATAATGCCTTTGTGGAGGCGGGCGCCGTAGCAGACGTGCCCGGCTTCGGCGCGGTGCCGCCGCTGGCGCTCGTCTCGCATCAAGCGGACCAGCAGCTGGGAGACGCCTCTGAGGGCACGCTAGACGTCCGGTTGCAAAAGCTACTAAACTCGAAGCAGTCTCTGGAGTCCGAAGTCCGCAAGCTGAAGCTGCAGCTGAACGAGGAGCGCGCCGCGCGCCAGAACGGCGCCGCCAGCCACCACGACCAGGAGTACGAGACTGAGCTAGAGACCCTCCGACGCTGCCTGACAGAGGCGAAGGCTCGCGCAGCCCGAGCGGAGGCCGAGGCGGCGCTGCAGGCCGCCGGCGCAGCCAGGCTCGAGGCGCAGGTGGCGCGGCTCAAGGCGCGCCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGAGGCGCAGGTGCCAGCCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGTGCCAGCCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGAGGCGCAGGTGCCAGCCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGTGCCAGCCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGAGGCGCAGGTGCCAGCCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGTGCCAGCCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGAGGCGCAGGTGCCAGCCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGTGCCAGCCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGTACCGCACACACTAGCGCTGCCGTCTAGCAGCTAG
- Protein Sequence
- MGRITKMATPTNSDVESAGDAFTDGDFDDSDEETVVEQSEASPKSQIHVNETVNADVKNNLHNGSTNGLEHQPRVNGLKNGDKELYSAVECRSNGDVVEFRRDSHGDQNPSIVGIIGDQHSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKLPESVGVRRGGSRLAALSPGGLHSPRRSSEDSADDVFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEHAQLSREHREKCSSHERLRREHASLENEVTCARDAVRARDAAAAAAGYNFVEAGAEADVPGFGAVPPLALVSHQADQQLGDASEGTLGKGDNAFVEAGAVADVPGFGAVPPLALVSHQADQQLGDASEGTLGKGDNAFVEAGAVADVPGFGAVPPLALVSHQADQQLGDASEGTLGKGDNAFVEAGAVADVPGFGAVPPLALVSHQADQQLGDASEGTLGKGDNAFVEAGAVADVPGFGAVPPLALVSHQADQQLGDASEGTLGKGDNAFVEAGAVADVPGFGAVPPLALVSHQADQQLGDASEGTLDVRLQKLLNSKQSLESEVRKLKLQLNEERAARQNGAASHHDQEYETELETLRRCLTEAKARAARAEAEAALQAAGAARLEAQVARLKARQDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQRERRRCQPGPPGRARGGAQAGAPQAAARGASQDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQRERRRCQPGPPGRARGGAQAGAPQAAARGASQDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQRERRRCQPGPPGRARGGAQAGAPQAAARGASQDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQRERRRCQPGPPGRARGGAQAGAPQAAARGASQDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREDHQDEHEEALKQERRKLQREVPHTLALPSSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -