Basic Information

Insect: Anania crocealis
Gene Symbol: -
Assembly: GCA_949315895.1
Location: OX438859.1:18451630-18462628[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.38 42 6.1 0.1 3 23 117 137 115 137 0.96

2 18 0.00087 0.096 14.4 0.1 2 23 141 163 140 163 0.92

3 18 2.6 2.8e+02 3.5 1.2 1 23 213 236 213 237 0.94

4 18 0.13 14 7.6 1.5 2 23 370 392 369 392 0.96

5 18 0.07 7.7 8.5 0.0 1 20 400 419 400 420 0.95

6 18 0.018 2 10.3 0.9 3 23 432 452 431 452 0.97

7 18 0.66 73 5.4 0.7 1 23 468 491 468 491 0.91

8 18 0.019 2.1 10.2 1.0 1 23 500 523 500 523 0.91

9 18 0.17 18 7.3 0.4 2 23 601 623 600 623 0.82

10 18 1.2e-05 0.0013 20.3 1.6 1 23 657 679 657 679 0.98

11 18 8.9e-06 0.00099 20.7 1.6 1 23 686 708 686 708 0.98

12 18 0.0001 0.012 17.3 2.3 1 23 713 735 713 735 0.96

13 18 8.9e-05 0.0099 17.6 1.4 1 23 741 763 741 763 0.99

14 18 2.1e-06 0.00024 22.7 1.4 1 23 769 791 769 791 0.98

15 18 0.00067 0.075 14.8 2.6 2 23 798 819 798 819 0.98

16 18 0.0006 0.066 14.9 0.5 2 23 828 850 827 850 0.97

17 18 0.0015 0.17 13.7 0.0 1 23 855 877 855 877 0.97

18 18 0.00059 0.066 15.0 1.9 1 23 883 906 883 906 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.38	42	6.1	0.1	3	23	117	137	115	137	0.96
2	18	0.00087	0.096	14.4	0.1	2	23	141	163	140	163	0.92
3	18	2.6	2.8e+02	3.5	1.2	1	23	213	236	213	237	0.94
4	18	0.13	14	7.6	1.5	2	23	370	392	369	392	0.96
5	18	0.07	7.7	8.5	0.0	1	20	400	419	400	420	0.95
6	18	0.018	2	10.3	0.9	3	23	432	452	431	452	0.97
7	18	0.66	73	5.4	0.7	1	23	468	491	468	491	0.91
8	18	0.019	2.1	10.2	1.0	1	23	500	523	500	523	0.91
9	18	0.17	18	7.3	0.4	2	23	601	623	600	623	0.82
10	18	1.2e-05	0.0013	20.3	1.6	1	23	657	679	657	679	0.98
11	18	8.9e-06	0.00099	20.7	1.6	1	23	686	708	686	708	0.98
12	18	0.0001	0.012	17.3	2.3	1	23	713	735	713	735	0.96
13	18	8.9e-05	0.0099	17.6	1.4	1	23	741	763	741	763	0.99
14	18	2.1e-06	0.00024	22.7	1.4	1	23	769	791	769	791	0.98
15	18	0.00067	0.075	14.8	2.6	2	23	798	819	798	819	0.98
16	18	0.0006	0.066	14.9	0.5	2	23	828	850	827	850	0.97
17	18	0.0015	0.17	13.7	0.0	1	23	855	877	855	877	0.97
18	18	0.00059	0.066	15.0	1.9	1	23	883	906	883	906	0.98

Sequence Information

Coding Sequence: ATGTCTTCAGACGAATCTGATGACGAACCCTTATCGGTATTAGCGGCTACAAAAAGGTTAAATCCTGAGAATTTTGAAGGGCTTGAAGAGACAACAATAGAGGTGGTTTCTCCAACAAAAAAGAAGAGAAAGAAGTATGAGTTAGATGATAATGTTTCAATTACCATCAAGTTACATCAACCGAAAGATGTTCGTGGTCCGAAGGTGGTTGAAAGACCCACGGATGTATGGATGTACATAAAAGACCTAAACCCGACTGGGCCATACAGTTGTTTACTTTGTGCAGAGTGGTTTATTAATCGGTCTAAAATTATCATCCACTATGTGGTAAACCACAAAAAAGATTTCTGCGGAATCTGCAGATATTTTGTTGCAGAGAGAGATGACTGGAAAGCTCATATGCAGTTTCACACACCATGGCCATGCTCTCAATGTACAGAGACGTTTCCTACAGAGGCAGAGTTGAGGAAACACTTGAGTGCTGTTCACAATCTGGTACACTGTCGTCTCTGTCACTTTAGGACTTCTGACGATGAGCAATACGACAATCATTTATGTAATAAGCACAATGTAACAAATACAGCCAGTAAACATTCAGAAATACTATGGGAGATAGAATATGCTGGCAGTCCAACGTTTCAGTGCTTGCTGTGTTCCAAAGGAGCAATTTTGTCCACAACACTCTTTAATCACTATATGGGGTATCACCATTTCACTCTCAAGTGTATCGCAAACATTTTATCTGGTACTGACCCACCTTTTACTGTAGATGGTGCAAATGTGGGTACTGACTTTGTTAGTGATCAGTTTAAGAAAACAGGCTACCAAGAATTGGAGAAAAAGATAGATAATGATGCTGAATTAGTTGTAAAGCAAGAAATCTTAAGTGACACagaaaataatgatgataataatgacaaaaatagtattttagaAACATACAAAGGTAACGAAGATTTTGATGTCACATTAATGGAATTAATTGTGTTGCATAAGTGTTATTTTGATTATGTAAATTACACAATAAATCAGATAAATTCAAACAGTGTACCTGAGGACTCTGTTATAGATTACAAAAGTGCCAACGAAGAGCTGGAGTTGGATGTTGAATGTAGTTTATGCAAAACATGTGTTACTTCTGTGCAATCTTTTGCCACACACATGCTTAAAATGCACGGAGTGAAATCTGTACCAATTTATTCGTGTAGAATTTGCGCTACTACATTTGATAATCTTCCTGAGCTTGAGGCTCATGTTGTAGATGAAATGGGTGAGTTTGATGATTTGTGGCTATGTCAGTTTTGTGACAAGGAGTTTGATAGTAGGGAGGCAACGAGAAAGCATTTAAACGATCATTGGGATGGTATGCAGTTTGACAACTGTTTCAGTCCCCATCTCGGGTTTAAATGCAAATACTGTCCCACTTTGTTTTGGAACGAGACTGATAGAGAAACACATCAAATAAGAGTGCATTATGATAAGCACAATGAAGATTTTTATAAGTGTGAAAGATGTGTGGAGGTGTTTAGTGATAAGATCTGGTTCATACATCATTACGTAGAAAAACATCCGACAGAACAGGAGCTCCTTTATCTagtcaaatgctgtatttgtaGCCTTGTGCTGCCGTCTGTCGAAACTATGCGGACACATTTTGAGCAGAACCATCGTGATGCTAGGAAGGTCTACTGTTCTTTAGGCTCATGTGTGTTTAAGCCACTGAGTCACAGGAAGTCtttcaaattgcatatgaagGCAGTTCATACGGAGGAAAGTCTCAAGAAGGCGGCGGGCGTGGACAGCTGTTCGATATGCGGGCGGGAGTTCAACAGCGCACGCGCATGCGGCACGCACATGGCCCAGGCGCACGGAGCGCGCAAGTTTAAGTGCAAACTGTGTAGGGATGTACTGCATACTATAGACGAAAGGAAACTCCACTACCTGATCCGACACCCGGGCAAGCATCCATATGAGTGCACCGAGTGCGGCAAGTCTTTCCAATACAAGTCATCCCTGTATATGCATAAGCAGGTTCATGCTAAAAATAAGCCAACGTTCACCTGTACTTACTGCGGTAAAGTGTTtatgAAGAAGGATTCCTACCGCGAGCACCTCCAGATACACGAGGGTCCACGTCACGCTTGCTCGTACTGCCCGATGCGTTTCGTCCAGCGATCTAACATGTTACGCCACGAGCGAAGGCACACCGGCGAACGGCCGTACCAGTGCCCGCAGTGCCCTAGGACCTTCTCCGATAAAGGAGCGTGTACTTCGCACGCCAGgACCCACACGAAGGACACGTCGTATGCGTGCCTCTACTGCGGGCAGACGTTCGTTCAGAAATCCAAGCTAACTTATCACATTCGAAAGCATACTGGAGAAAACTTGGAAACCTGCACGGTGTGTTCAAAGCTGTTCACTAGCGCCTGTTCACTCCGCGAACACATGAAGATCCACGATCGGCATACCAAAGTTCCTGTCCAGTGTCCTTTGTGTGACCGTAAGTACCAGGACGAGCGGTACATGTTACGTCATATTCGAACGACGCATACGCACATCCGGTACGATTGTCCACTGTGCCGGAAGTCGCTGACCAGCCCCGCCGGGTTAAGGCTACATGTCGTTACTCACGGGAAGGCAAACATGTATAAGTGCAAATCATGCCCAAAGACATACGCAGTCAAGAGGACTATGATACGGCACGTACGCAAACGTCACATACCCAAGAATTCCAGTCAGGCCCTAAAAGATTTCTACCATAAGCTGGACCCTCGCGAGTGCAGCCTGCCCTTAGACGAAGAGACTATGACGAAAATATTCGGACCTCCTAAAAAGAAGTCGAATGAAAATGTTATAAGAGACTTTGTTACTTTGACCCAGAATATAAACTTGCCAGTGAACAAAGCACAGAACGATGAAGACAGTGAAGAATCTCAAGATGGGTCTCAAGACAGAGACAGTGACGGCGATAGTGATAGTGAAAAAATAGTCACTAAGACAGAGAAAGAGGATACAGACGAAGACTCCAATCACGAGGTGGAGTTGGAGCCGACCGACTTTGTGAGTGTTAAGATTGAACATGTCGAAGAGGATGTGGAGGAAGAGGATTGA
Protein Sequence: MSSDESDDEPLSVLAATKRLNPENFEGLEETTIEVVSPTKKKRKKYELDDNVSITIKLHQPKDVRGPKVVERPTDVWMYIKDLNPTGPYSCLLCAEWFINRSKIIIHYVVNHKKDFCGICRYFVAERDDWKAHMQFHTPWPCSQCTETFPTEAELRKHLSAVHNLVHCRLCHFRTSDDEQYDNHLCNKHNVTNTASKHSEILWEIEYAGSPTFQCLLCSKGAILSTTLFNHYMGYHHFTLKCIANILSGTDPPFTVDGANVGTDFVSDQFKKTGYQELEKKIDNDAELVVKQEILSDTENNDDNNDKNSILETYKGNEDFDVTLMELIVLHKCYFDYVNYTINQINSNSVPEDSVIDYKSANEELELDVECSLCKTCVTSVQSFATHMLKMHGVKSVPIYSCRICATTFDNLPELEAHVVDEMGEFDDLWLCQFCDKEFDSREATRKHLNDHWDGMQFDNCFSPHLGFKCKYCPTLFWNETDRETHQIRVHYDKHNEDFYKCERCVEVFSDKIWFIHHYVEKHPTEQELLYLVKCCICSLVLPSVETMRTHFEQNHRDARKVYCSLGSCVFKPLSHRKSFKLHMKAVHTEESLKKAAGVDSCSICGREFNSARACGTHMAQAHGARKFKCKLCRDVLHTIDERKLHYLIRHPGKHPYECTECGKSFQYKSSLYMHKQVHAKNKPTFTCTYCGKVFMKKDSYREHLQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYQCPQCPRTFSDKGACTSHARTHTKDTSYACLYCGQTFVQKSKLTYHIRKHTGENLETCTVCSKLFTSACSLREHMKIHDRHTKVPVQCPLCDRKYQDERYMLRHIRTTHTHIRYDCPLCRKSLTSPAGLRLHVVTHGKANMYKCKSCPKTYAVKRTMIRHVRKRHIPKNSSQALKDFYHKLDPRECSLPLDEETMTKIFGPPKKKSNENVIRDFVTLTQNINLPVNKAQNDEDSEESQDGSQDRDSDGDSDSEKIVTKTEKEDTDEDSNHEVELEPTDFVSVKIEHVEEDVEEED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00076829;
90% Identity: -
80% Identity: -