Acro008731.1
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- -
- Assembly
- GCA_949315895.1
- Location
- OX438861.1:20903749-20906351[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.3 1.5e+02 4.4 0.0 6 20 172 186 170 188 0.95 2 13 0.00019 0.021 16.5 0.1 2 23 205 226 204 226 0.97 3 13 0.014 1.5 10.7 4.9 1 21 234 254 234 255 0.93 4 13 0.001 0.11 14.2 3.4 2 23 286 307 285 307 0.97 5 13 0.0002 0.022 16.5 3.9 1 23 315 337 315 337 0.98 6 13 0.00029 0.032 15.9 2.2 1 23 345 368 345 368 0.95 7 13 5e-06 0.00055 21.5 3.5 1 23 392 414 392 414 0.98 8 13 2.5e-07 2.8e-05 25.6 0.9 1 23 420 442 420 442 0.96 9 13 6.7e-06 0.00074 21.1 0.3 1 23 448 470 448 470 0.99 10 13 7.2e-07 8e-05 24.1 0.7 1 23 476 498 476 498 0.98 11 13 3.3e-05 0.0036 18.9 0.6 1 23 504 526 504 526 0.98 12 13 6.3e-05 0.007 18.0 2.1 1 21 532 552 532 554 0.96 13 13 8.2e-07 9.1e-05 24.0 0.4 1 23 560 582 560 582 0.98
Sequence Information
- Coding Sequence
- ATGGATATATCGACGAAAATTAACTTAGAAAATATTTGCAGGACTTGCTTACTAGAATCCCCCCAAATGGTGTCTTTATCCACCAAAATGGAGGACAACCATCGGACTCTCTACGACGTCCTGCTATTTGTtcttaataacaatattactGTGAGTGAAAACTTCCCTAAACAGATATGCAGCGAATGTGAAAGCTTGTTGCACAGAATTGATGGCTTCAAAAAGCGTTGCAATGAATCTGAGAACATTTTGAAGGAGCTAGTTGATGCCAGCCAGCCGGGACCGTCTCAAGCTGTGAAGTTGGAATCTAACACTAAAAACGATCACTTTATAGAGCTAGATATAAGTCCAGTTAATGTACTAGATTCTTTTAAAGGAAATGTGGAATCTAAAGTTAGTGTGAAGGAGTGCATAAAGGAAGAGTTTTCCGATTTCTCCGATGATATAGATGATGGAACTTTTGGAGATAACAGTGAAAATATAACAGAAGATAGAAATTTATACAACTGCCCGTGTGGTGAAGGGTTCTCTGAATTAAATGAATATAGGGCACACATggacagtgaaaaatgtaataaaatggtcaaaaacaatttattgttaatacCCGTTAAATGTGCACAGTGTGGTATGGTATTTAAAAATGCTGAAGAAATCAAAGAACATGTTAAAACACATCTTAAACCTGATCCTAAGTATTTTGATTGCACATTCTGTTTgaaacaattctcaaaaaaatgcaatcttcaaaaacatttaagtaaaaaaatttgcaCTAAGGTTACAGTTAAAAAAGAAGTGAAACGTAAAGACAAAGACAAAACCAAAGACAGCTCATTAATGTTGATCCCAATAAAATGCGAGCAATGTAACatagtttttaaaagtatgaaatcatttaaaaatcatCTTCATACTCATGTCAAAAGTGTTCCAGAGTTTTTCCAATGTTCACAATGCATGAGGAAGTTTAAGAAAAAGTCATCCCTAATCTCACATATGAAGAATCACAAAGAGAAAGACAATATGAAGTACACCTGCGATATTTGTAAACGTGAGTTCAAATATCAGGCACACCTTGACAACCACAATCAATCAGAACATGCTAAAAGGAAAGAACTTGTTCACTTAGAAGTGTTTCCGTTGGATGTGAATAAGATAAATGATAAGAAACATCAGTGTAAGCTTTGTAGTAAATCGTTCGGTATGCAGTCAACGTTGACAGATCACATGAGGACACATACTGGGGAGAAGCCGTTTCTGTGTTCTGTATGCGGCCGAGGTTTCACTCAGAAAACTAATCTTGCGCAGCACATGCGGAGGCATTTGGGGTTGAAGCCGTTTAAATGTACCGAGTGTGAAAGAGGGTTCGTATCAAAAGGCGAGCTAGACGCTCACCTGCGTAAACACTCCGGCGCTCACCCGTTCGTGTGCGACGAGTGCGGCAACGGGTTCACGACGTCCAGCTCCCTGCGCAAGCACAAGCGAGTGCATACGGGGGAACGGCCCTACGCCTGCGATCTGTGCCCCATGAAGTTCAGGGTGTCAGGCACCCTCAAAAGCCACCGCCGCACGCACACCGGCGAGAAGCCCTACCAGTGCTCGTACTGCGAGAAGGCGTTCGTCCAGCGCCAGGACCTGGTCTCCCACATCCGCTGCCACACCGGCGAGCGGCCCTTCGTGTGCGCGCACTGCGGCCAGGCCTTCCGCAAGCCCTCCGCGCTCAAGGTGCACGCCAGGACGCACAAGCCGCCTCCGCACGTCATGGAATTGCAGGGGACCAGCTAA
- Protein Sequence
- MDISTKINLENICRTCLLESPQMVSLSTKMEDNHRTLYDVLLFVLNNNITVSENFPKQICSECESLLHRIDGFKKRCNESENILKELVDASQPGPSQAVKLESNTKNDHFIELDISPVNVLDSFKGNVESKVSVKECIKEEFSDFSDDIDDGTFGDNSENITEDRNLYNCPCGEGFSELNEYRAHMDSEKCNKMVKNNLLLIPVKCAQCGMVFKNAEEIKEHVKTHLKPDPKYFDCTFCLKQFSKKCNLQKHLSKKICTKVTVKKEVKRKDKDKTKDSSLMLIPIKCEQCNIVFKSMKSFKNHLHTHVKSVPEFFQCSQCMRKFKKKSSLISHMKNHKEKDNMKYTCDICKREFKYQAHLDNHNQSEHAKRKELVHLEVFPLDVNKINDKKHQCKLCSKSFGMQSTLTDHMRTHTGEKPFLCSVCGRGFTQKTNLAQHMRRHLGLKPFKCTECERGFVSKGELDAHLRKHSGAHPFVCDECGNGFTTSSSLRKHKRVHTGERPYACDLCPMKFRVSGTLKSHRRTHTGEKPYQCSYCEKAFVQRQDLVSHIRCHTGERPFVCAHCGQAFRKPSALKVHARTHKPPPHVMELQGTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00076810;
- 90% Identity
- -
- 80% Identity
- -