Acro003468.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anania crocealis
Gene Symbol
-
Assembly
GCA_949315895.1
Location
OX438858.1:7335693-7358801[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.0001 0.011 17.4 2.2 1 23 420 442 420 442 0.97
2 20 0.0052 0.57 12.0 0.6 1 20 448 467 448 470 0.94
3 20 2.6e-05 0.0029 19.2 5.6 1 23 489 511 489 511 0.98
4 20 0.00012 0.013 17.1 4.1 1 23 517 539 517 539 0.99
5 20 4.4e-05 0.0049 18.5 5.3 1 23 545 567 545 567 0.97
6 20 2.5e-05 0.0028 19.3 8.8 1 23 573 595 573 595 0.97
7 20 6.6e-07 7.3e-05 24.3 3.1 1 23 601 623 601 623 0.98
8 20 0.00013 0.014 17.1 6.7 1 23 629 651 629 651 0.97
9 20 0.00013 0.014 17.1 6.5 1 23 657 679 657 679 0.97
10 20 0.00066 0.072 14.8 0.5 1 16 685 700 685 702 0.96
11 20 6.2e-05 0.0069 18.1 7.9 1 23 748 770 748 770 0.98
12 20 5.6e-05 0.0061 18.2 7.5 1 23 776 798 776 798 0.98
13 20 5.2e-06 0.00058 21.4 6.4 1 23 804 826 804 826 0.98
14 20 1.2e-05 0.0013 20.3 4.6 1 23 832 854 832 854 0.97
15 20 4.6e-05 0.0051 18.5 6.1 1 23 860 882 860 882 0.97
16 20 3.1e-05 0.0034 19.0 6.1 1 23 888 910 888 910 0.98
17 20 2.1e-05 0.0023 19.5 8.0 1 23 916 938 916 938 0.97
18 20 1.4e-06 0.00015 23.3 4.9 1 23 944 966 944 966 0.98
19 20 0.00042 0.046 15.4 0.2 1 23 973 995 973 995 0.97
20 20 0.68 75 5.3 5.0 1 23 1005 1027 1005 1027 0.98

Sequence Information

Coding Sequence
ATGAATCCTGAACATCACAATATGAACACGGGTGGTGGCCAGCCTCCTGGAAGTTCTGAGTCTCAGAATCAAAGAGTTCAATCTGCGCAGCAACAGCAGCAGGCTAACAGTTTGCCCGCGACAACCTCTGCGACGGACCTAAGAGTGAATTCTGCGGCAGTAAACGTCGCTTTGTCTAGCGTGGCCAAATACTGGGTGTTTACGAATTTATTTCCCGGCCCAATACCACAAGTTTCAGTGTATGGATTACCTACCGGTGCCAGAATCGAAAATGGAAAGCCCGTCCagGACCTAGGACAACATGCTAGCATACTTAATGGTGATCCAAATATTATTCTGGGCAACCATGGGGGCCAGCAGCAAGTTACAGTGTCAGCCACTGGAGGGCAACAAATTCCAATATCTCAAATTATTGCTGCACAGTCTGGACAGACACATGAAGCGTTGGTGGCTCACAGCCAACACCAAGAAATGGCCGCACAGCAGGCATCGGGCAACACTCAGGTCACAGTTAGTGCAGGCCAACCACACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGGCATCATTCACAACAACATTTAATGCAGCAGCAACTAATGGCGTCTGCCCGTCCGGAACACTCAAATCAGcagATTCAGCTGACAGTCAGCGAAGATGGTATTGTCACGGTGGTTGAACCAGGCGGCGGCAAGCTAGTGGACAAGGAAGAGCTCCATGAAGCTATTAAGATGCCAACAGACCACACCCTCACAGTGCATCAGTTACAACAGATTGTGGGACAGCAGGTGATCGACAGTGTGGTTCGAATAGAACAGGCCACAGGAGAGCCTGCAAACATATTAGTGACCCACAATCCAGACGGTACGACTTCTATAGAGGCGAGTGCCGGCGAACAACTCATAGTGAAAGATGAAAAAAACACTGGAAGCAAGATCGAGACAGCGCAATATGCTGAAATCAAGGACATAAAAGGAATAGACCTTAAGAGTGTTGGAGCTATGGGCATGGAGGGCGCCGTGGTGAAAATATCTGGGGCATCTGAGCATGATCTTCATGCCATGTATAAAGTCAACGTGGAGGACCTATCACAGTTGCTGGCTTATCACGAAGTGTTCGGGAAACTTAACGCCGACGGGCAGCAGCAAGCCAAGgTGATAAGCGAAGTAGAAGTGGAAGTAGAGGCGGGACCAAGCGCCGGAATGTCGGAAGCGGACTCCTCGCCTGGACACCATTCTTGCGATATTTGTGGCAAGATATTCCAGTTTCGATATCAACTAATCGTTCATAGACGATATCACGGGGAGAGTAAACCATTTACATGTCAAGTTTGTGGTTCCGCCTTTGCCAATCCGGTCGAATTATCAAGACATGGAAAGTGTCATCTTGCTGGCGACCCTGCCGAGAGACACGCGAAAAGGTTGACGCAAGATAAACCGTACGCCTGCACCACTTGTCATAAAACCTTCTCCCGCAAAGAACACCTGGACAACCACGTTCGCAGTCACACTGGAGAGACACCATACagaTGTGAATTCTGCGCAAAGACATTCACCCGCAAAGAGCACATGGTGAACCACGTAAGAAAACACACCGGTGAAACGCCGCACCGCTGCGAGATTTGCAAGAAGAGCTTCACCAGGAAAGAGCACTTTATGAACCACGTCATGTGGCACACGGGTGAAACGCCACACCATTGCACATTATGCGGTAAGAAGTATACTAGGAAGGAGCATTTAACGAACCATATGAGGTCGCACACAAATGATACGGCGTTTCGATGCGATCTGTGCGGCAAGTCGTTCACAAGAAAGGAACACTTCACCAATCACATAATGTGGCATACCGGCGAAACTCCACACCGCTGCGATTTCTGTTCAAAAACGTTTACGCGCAAAGAACATTTGCTGAACCACGTCCGTCAGCATACGGGCGAGTCGCCGCACCGCTGTAACTTCTGCTCCAAGTCTTTTACAAGGCGTGAGCACCTCGTCAACCACGTTAGGCAACACACCGGCGAGACGCCCTTCCAATGCGGTTACTGTCCCAAGGCGTTTACAAGGAAGGACCACCTCGGTAATACATCTATGGGTTCACTAGTTTATTATGGAAGCAACTTCTACTATAAACCTATAGAGGGTAGAGGAAAGGAGAATCATCTGCATGAAATATTTCTTCCAGTCAACCACGTACGGCAGCACACAGGCGAGTCACCCCACAAGTGTTCATTCTGCACCAAGTCGTTCACCCGCAAGGAACACCTCACGAACCACGTGCGTCAACATACAGGCGAGTCGCCGCATCGATGCACGTACTGCGCGAAGTCTTTTACGCGTAAGGAGCATCTCACCAACCATACCAGACAGCACACGGGAGAAACGCCACACAAGTGCACGTACTGCCCGCGCTCGTTCACGCGCAAGGAGCACCTGAACAACCACGTGAGGCAGCACACCGGCGAACTGCCCTTCAACTGCACGTACTGCACAAAGAGTTTCACAAGGAAGGAACATCTCGTCAGCCATGTTCGACAACACACAGGCGAGACACCTTTCAAGTGCGCGTACTGCACTAAGTCGTTCTCGCGGAAGGAGCATCTCACCAACCACGTACACCTGCACACCGGGGAGACGCCGCACAAGTGCGCATTCTGCACTAAGACATTCTCCAGGAAAGAGCATTTGACCAATCATGTCAGAATCCACACTGGCGAGTCGCCTCATCGCTGCGAGTTCTGCCAAAAGACTTTTACCCGCAAGGAACATCTGACAAACCATATGAAACAACACACGGGCGACAAACCGCATGTTTGTAAGATCTGCTCGAAGCCGTTCACTAGGAAGGAACATCTAATGACTCATATGAGGTCCCACAGTTGCGGCGACCGGCCGTACAGTTGTGGCGAATGCGGCAAGTCTTTCCCGTTGAAGGGCAACCTTATATTCCACGAGCGATCGCACAACAAGAGCGGAGGCGGCGCGCGGCAGTACCGATGCGATGTGTGCTCTAAGGATTTCTTATGTAAAGGACATCTAGTATCGCACAGACGTACGCATACAGAGGGAGCCGAGGGAGCGGGCAGCGCAGAGCCGCCGGCTGAGGGCGAGGACTGTAACACCGACTGCACAAAATGCGAAAAAATTGAAACCGAGCAGCCGGAGAGAAAACATGACATCAGACTGAGTACAGAAAATAGGCCCACAGAAAGCAATGTCACTCAAAGTGAAACTAATGTAGCTGTAATGCAATTAACGAGTcagCAAGTTCGAGCGGCGTCCGCGACGAGTAGCACGAGTGTAGCGGGCGCCACGTTCACGCACTCTACGGCGCAGCACCACGCGGGCGCGGCCATTGCACATCACCCAGTCACCGTCAATTACTAG
Protein Sequence
MNPEHHNMNTGGGQPPGSSESQNQRVQSAQQQQQANSLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDLGQHASILNGDPNIILGNHGGQQQVTVSATGGQQIPISQIIAAQSGQTHEALVAHSQHQEMAAQQASGNTQVTVSAGQPHQQVPNNRVEFVQHHNIDMGHHSQQHLMQQQLMASARPEHSNQQIQLTVSEDGIVTVVEPGGGKLVDKEELHEAIKMPTDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAGEQLIVKDEKNTGSKIETAQYAEIKDIKGIDLKSVGAMGMEGAVVKISGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNADGQQQAKVISEVEVEVEAGPSAGMSEADSSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPAERHAKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTLCGKKYTRKEHLTNHMRSHTNDTAFRCDLCGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGNTSMGSLVYYGSNFYYKPIEGRGKENHLHEIFLPVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHTRQHTGETPHKCTYCPRSFTRKEHLNNHVRQHTGELPFNCTYCTKSFTRKEHLVSHVRQHTGETPFKCAYCTKSFSRKEHLTNHVHLHTGETPHKCAFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHTGDKPHVCKICSKPFTRKEHLMTHMRSHSCGDRPYSCGECGKSFPLKGNLIFHERSHNKSGGGARQYRCDVCSKDFLCKGHLVSHRRTHTEGAEGAGSAEPPAEGEDCNTDCTKCEKIETEQPERKHDIRLSTENRPTESNVTQSETNVAVMQLTSQQVRAASATSSTSVAGATFTHSTAQHHAGAAIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01071806;
90% Identity
iTF_00075762;
80% Identity
-