Acro025094.1
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- -
- Assembly
- GCA_949315895.1
- Location
- OX438875.1:6456382-6457488[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-07 0.0024 18.5 2.2 115 168 102 155 97 169 0.91 2 2 0.00019 2.8 8.4 0.4 122 173 195 246 181 294 0.85
Sequence Information
- Coding Sequence
- ATGCAACCAGATAGGAAACGAAAATGGAAATGTAATCAGTTTGCGCACAGTCCAAAGAGTCCAAAGCATATAAAAGTACTAACAACCAATGCTTTGAGTACTTCAGGAGAAAACTCCAATATCACATTAAGAAAAAAGGTACCACCTAAATCGCAAGAGGATTCTCTAATGATTACTACGTGTCGATCAAGCCCTACACTTACAAAATTATCACCAACCCAGGATTATTGTAGTGACACTAATGACGAGATTTGGGAAAACACTTCCTTAGAATTCCTATCGAGGAGTGAGGATTGTTCTTCTGCTAAAAGATATGAAATACAGGAACTTAAGgatgaaataaacaaaattaggACAAATCTCTTGAGTACACAATCTGAACTTGAAAACACAATAATCGAAAATAATGAACAGAAAcgacaaataaacaaacttaataaagaaatacagtttttaaaaagCATCTGCCGCAACTCAACTAATATAAGTAGTAGGGAGCAAACGGGAAACAAGTTTATTACACAGACACTAACCCCTTTAAAAGCCAATAGAGTAAGACGTATTTCCTGTGCTTCTCCAGTAACTTTAAAGGATACAGGGAATAAAACTAGTGAATggataattttattgcaaaatgaaTTCAAAGGATCACACAATAAATTTTTAGAAGCTGAGAATAATATAAGAAAGGTAGAGGATCAAATAGATAAACTCAGAAGCCAATTAAACGAAAAGCCTAGCAGTACCACCTTAATCaatgaaacaataaaatgtcatgatcaaaaaaatcaacaaaagGGGATGAAACCTAATATATTCATCCTCGGTACGCAACAAGTGACTGGTCTTGCCTCAGAACtaataaaaactagaaaaaacaGCAAGTTCGAAGATTATCACATATCAGCTTTCGTCAAACCACTCGCCTCTACAGAAAAAGTACTCAAGCTTTGCCAAAATCTAAACAACCACATAAGAGACATAGTAGTTTTATGTGTGGGTGAGAATGATAGTGATCCCCTTAAATCAATATCTGAGCTATATAGCGCCCTTAAATTGCTACAACAAAGCACTGTAATTGTAATGAGAGTAATTAATACTAGATAA
- Protein Sequence
- MQPDRKRKWKCNQFAHSPKSPKHIKVLTTNALSTSGENSNITLRKKVPPKSQEDSLMITTCRSSPTLTKLSPTQDYCSDTNDEIWENTSLEFLSRSEDCSSAKRYEIQELKDEINKIRTNLLSTQSELENTIIENNEQKRQINKLNKEIQFLKSICRNSTNISSREQTGNKFITQTLTPLKANRVRRISCASPVTLKDTGNKTSEWIILLQNEFKGSHNKFLEAENNIRKVEDQIDKLRSQLNEKPSSTTLINETIKCHDQKNQQKGMKPNIFILGTQQVTGLASELIKTRKNSKFEDYHISAFVKPLASTEKVLKLCQNLNNHIRDIVVLCVGENDSDPLKSISELYSALKLLQQSTVIVMRVINTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -