Basic Information

Gene Symbol
-
Assembly
GCA_030522585.1
Location
JAPYYQ010000769.1:30510-51720[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 1.9e-05 0.0028 18.9 0.9 1 23 249 271 249 271 0.98
2 31 0.0032 0.46 11.9 1.9 1 23 296 319 296 319 0.96
3 31 0.00016 0.023 16.0 0.5 2 23 326 348 325 348 0.96
4 31 0.00097 0.14 13.6 0.9 1 21 370 390 370 391 0.94
5 31 0.015 2.2 9.8 0.1 2 23 505 526 504 526 0.96
6 31 0.047 6.7 8.3 0.2 1 23 532 555 532 555 0.89
7 31 0.00014 0.02 16.2 0.1 1 23 624 647 624 647 0.96
8 31 0.064 9.2 7.8 0.5 1 23 653 676 653 676 0.95
9 31 0.14 20 6.7 1.5 1 23 689 711 689 711 0.97
10 31 0.00015 0.021 16.1 0.1 3 23 755 776 754 776 0.96
11 31 0.91 1.3e+02 4.2 0.5 2 23 837 860 836 860 0.93
12 31 3.6 5.3e+02 2.3 0.0 2 23 869 891 869 891 0.84
13 31 0.23 34 6.1 0.1 2 23 898 920 897 920 0.93
14 31 1.5e-05 0.0022 19.2 1.2 1 23 928 950 928 950 0.98
15 31 0.00039 0.056 14.8 0.6 2 23 1000 1022 999 1022 0.95
16 31 5.2e-05 0.0074 17.6 2.4 1 23 1025 1048 1025 1048 0.97
17 31 0.0029 0.42 12.0 0.6 2 23 1055 1077 1054 1077 0.95
18 31 0.00083 0.12 13.8 4.8 1 21 1118 1138 1118 1139 0.94
19 31 0.0032 0.45 11.9 1.8 2 23 1153 1174 1152 1175 0.93
20 31 0.61 88 4.8 3.3 1 23 1178 1200 1178 1201 0.95
21 31 0.011 1.6 10.3 1.1 2 23 1208 1231 1207 1231 0.93
22 31 1.1 1.6e+02 3.9 0.2 2 23 1239 1261 1239 1261 0.95
23 31 4.2 6.1e+02 2.1 0.0 2 23 1268 1290 1267 1290 0.87
24 31 0.26 38 5.9 2.7 2 23 1299 1321 1299 1321 0.96
25 31 0.14 21 6.7 0.9 2 23 1327 1349 1327 1349 0.93
26 31 0.15 21 6.7 0.2 1 23 1416 1439 1416 1439 0.95
27 31 0.015 2.1 9.8 1.8 1 21 1469 1489 1469 1490 0.93
28 31 0.37 54 5.4 1.9 2 23 1592 1614 1591 1614 0.94
29 31 0.52 75 5.0 0.4 2 23 1621 1643 1620 1643 0.95
30 31 0.36 52 5.5 1.2 1 23 1654 1676 1654 1676 0.94
31 31 0.047 6.8 8.3 0.2 3 21 1685 1703 1684 1704 0.94

Sequence Information

Coding Sequence
ATGCAGGCCCCATTGCCCACGGGCAAGTACCACGAGCTCTGTAGGCTCTGCGCCACCTTCGACGCCGCCAAACTCGACTTGTTCGGCCAGGAGGGCAAGAACCGACAGCTCGTCGAGAAGATACAAACGCTTTTACCTTTCAAGATAAGAGAGGAGGACAAACTACCAAAATGCCTCTGCTTCAGATGCATGTTCAAGCTCGAGGGCTTTTTCGACTTCCGAGTGGCGTGCTTGCAAGCCGAGGAGGTACTTTCCAAGCACTGGGATAAATTTGACGAGTCGAAAGTAAAGCTCGAAAGCAGCGAAGATGCCGAGCCATACTCGGAGCTGCGAATGGAGCTGCTCAAGGATAAGGAGAGCGCGCCGGCGCCGATGCTCATGCCGGAGGTGCCAGTGGTCAATCCAAACGCCGCCCTGGGCACGCCGCCGCGGCTCAAGTCCGACGGCGAGCCGGAGATGGAGGAGATCGTGCCACCCGGGGCGGCCGGTATCGccgagcaacagcagcagcagcagcacacgaTGCTGGGGCACCACTtggccggcggcggcggacaaGCAGCAGCCGAGGAGCCAGAGGACCACGACAGGTCGGACGAGTACGAGATGGACATGGAGACGAACCCGAGCGACTTCCTCGAGATGAGCGCTATGGTGCCGGAGGAGGAGCACGTGCCCCTGCCGATccagccgccgccaccacaGCAGGAGGTCTTCCAGCACAGAAACGAGCAGCACGAGGTCTACGTCTGCTCGCTCTGCAGCAAGGCTTTCAGCTCGAAGGGACACCTCTCCCTCCACGCCCGCATACACGTCGGCGCCGGCGACGGAGCCGTCATCGGCGAGAAGGTCATCACCGACGACCACACCTCCTACAAGCGACCCTACCAGTGCGACCTCTGCAACAAGTCGTACTCGACGGCGAAACACCGCTGGGGACACGTCTCCACGACGCATAGGGGCCATCCAGCGGTTACGTGCGGTTACTGCTCGAGGATCTATTCGACGCGCACGAACCTCGAGGAGCACATAAAATCGAGGCACGCCGGTCAGCCTCCGCCGCCCGAAATGGCAGCTCAGTACATGCAACAGCAGCACGAGTCGCGCTTCCATTGCAAGATCTGCCCGAAGACGTTCGCCAATGTTACGGAATACAACAAGCACAGTCGGATCTGTCTCAATGAGCAGCAGCGAAAGGAGGCGGCGGCTGCCAACAACAGCTACAATCCCCAGAACTTCTGTAAGTGTGAGTTTCGCCAAACTAAGCTGAAAAGCGCTTTGGAAGCTACTTCGGATATGTCCAGCCTTGATTCCGACTACGAGAGCAAAGATTACAAGAGCGCAGAGGCCAAACTTGCTAAAAATCCTCAGCTGACCATCCTTAAGCAGGCATTGATTAAAGGTGACAGTGTTAAGAAAGAGTATGATGAGAGACAGAAAATGTTGAgtaaacaaaagaaacaagtCAATGCGGCAAATAAAGACATACCAGATTTAGATATGAAGAGATGGTACTGCGAGGCGTGCCCATTGAACTTTGCAACGGTCGATGAATTGCGACAACATGAAAAGACACACGACATGGAAAAGCCATACATCTGCATCTTGTGCGAGAAGGATTTCGCGTTGAAATCATCGCTTAGCAGACACATTGTATCGTCCCATGGCGTTGACCCTACACCGCTAATCGAGAGTGACAAGTGCCTCAAGAAGTCAGTGAAGGGTATAAATAATGAGGGACCACCAGTCATCAAACAAGAGGACAGCAATACCAAAGACAATTCTGAATCGCCGTATTCCGATaaTATGGATAACGACGATGATGAACACGAGAATGGAAATGAAAACATGCTCGAAGTGGAAACAGTCTTTGTTTGTGAAATTTGCACGCGCGATTTTAACGACCGAGCGTCGTTATGGCTGCACATTCGCGCTACCCATAAAGAATATGCCGCGTTTGCTTGCGGTATATGTCTCAAAATTTGTGGGGATAACACGCAGCTTATGAATCACGTTAGTATGTACCACGGAGCATCACAGCTGGCAATGTCCGAACAGAGAAGaTATAGTTGTACAATATGCGGACGGCAGCACGATTCAAGGAAAAAACTCATAACTCATGTATCAATTCATAATATAGATCCCAGCTATGATGCTTCTCGATTTGTACAGCTCAACGCCAATTATTATAACGAAAATGTTAATAGTAATGAAGGTAATGAATTAATTATGGATTGTGATGATGAGAGTGAAAAGGTTGACTGCTACATTTGCTACAAGCCCTTCCCTAATGAGGATCAGTTAATACGACATCAAAGGAACGCTCACAAAACAGAGAGCATGATGGGCGAGTACAGTGGTAACGGTGATCCCGCCGGTCAAAACGGTAATATCAATCGTGCTCAGTATCATCTGTTCTTTGTATGTGAACTTTGTGGCAGTTCGCATCCCAGCAAGTGGGAGCGCTGGTTACACGTTAGCAGCGCTCACGAAAACGAACTTGCTATAAAGTGTGAGCGTGATGACTGCGCCAAAATTTTCGCGACCAAGGCCTTACGTAACGAACATGCGCAACACCATCAGTTGCAAGGCAGTTCTCCAAATACCTGTGAAATTTGTGGCAAACTGTGGGGTAGCAGAGTTGACTATTGGAAGCATGTCATGGGTGTGCACGCGGACACGGTGCCGCTTATCTGCGGTGTCTGTCTCAAAGTCTTCCCAGACGTATTGCAACTTAGCCAGCATGTCAAGCTGAAGCACTGGCCATTGACGAATGGTGATTTTAGTTGCGACATTTGTGGCAGACCGTATTCCAACAAGAGCAAAATGTCGCGGCATCGCAAAATTCATGGTCTCGATGGCGAGGCATTTAATCCAGCGGCTACGAACAGTAGTCTAATTATTCACGATGCATTGAACGAGATGTCCCCTGAGTCGATGCAATTGGACAATGGACTTCCACCTCAACCAATCGAGCCATCTGGTACGATGGACCTGAGTTGCGAGGATTGTGACATAAAGTTCCCAAGTCTAGAAGACCTTTGCAACCACAGGCGGCTTGTTCACAACCGTTTCCCTTGCGATTTGTGCAACAAATTCTATTATCGCAGTTCGCATCTATGGAAACACGTGAATCGCGTGCACAAAGGCCACGAGGATGTGACCTGCAGATACTGTTTCAAGACGAGTGCATCACGCGATCACCTTGCTGCCCACATCGCCAAGATTCACCGTTACGAGCCTGATGTTAAGAATGACTTAGCATTGCGTGATGCGATGCAAGTGAACTATATTAAAAGCAGTGGCGGTAGTGTATACGGCGAAGCAAACGATAACGAAGAAGACGGACTGCATTTCTGTGAAAAATGTAACAAGTCATTCCACAAGCGCTACCTGCTGAGACGTCACATGAAAGGTTGCCAAAACTACCGCAAGGATCCGGGTGCTCTACTCACACGCTGTCGGGCTTGCGAGCGCATATTCAAAGACCGCGCGAGTTTGCAGAAACACATCGAGAACCATCACAGTTCGTACACGTGTCACCTGTGCAATGAGACCATCACGTCGAAGCTCGGCATTATGACGCACAACCGCATGCATCACATGCATCATCCAGACCTCACCTGTGAATATGATAACTGTCGCAAACTCTTTAGAACGAAAGAAGATCTTGAATCTCATCGCAAAGATCACAAACATCACGGAAGTCCAAACGTCTGCGATTTCTGTGGCGACACAGTTGAAAATAAGCTCAAACTAAAGATGCACATCCTCAGCCTGCATCGAAACGAGATTGGGGTCTCGTGTGGTGTGTGTCTTATACCAATGAAGGATCCCAAAGATCTTAAAAAGCACGTTGAAGATGTTCATACAGGTGTGCTTGATAGGCCTAATACCTGCCagGTTTGTGGAAAGCAATACGCTTCGAAATGGAAAGCATTTGACCATACGAAAAAGTGCCACGGCAAGGTGTTCCGTACGTGTAAGCAATGCCTTGCAGTTTTCACATCCGACGAGGACTTGCGTTCGCATTACGAGCATGTACATAACATCCCGAAGGACCAGTTAGATGCATTCCAGTACAGGCTCGAAGTTGCGGGCAATAAGATGGACGATTATGATTTAGGCCCTCTCGAAGTCGTTGTAAAAGAGGAGCCCGAGGAGCTTGATTTCGACGTCGACGCATTTGACGATGATAACGGAAATTCGAATGACTCGAAACGCAGGCGCTCGGTGAGCGACACCTTCGACTGCGAGATGTGCCCAGAAATATTCTTAAACTACGAACTGCTCTCTTCTCATTATCGTAACGTGCACAACACGGATCCCCAGCGTATTTACAAGCGCATGCGAATCGAGTCACCAACCGCCAAGGCCAAGAAGAAGATGCGCGAACGCGAAAACTATGAGTGTAAGAATTGTCAAAAGCAGTTCTGCACGAAACCTCTTTATCTGGACCATGTGAATATGTGTACACGCAAATCGATGCCACCTACAACCTCAATACTCGAGGCCCACCTGAAGGGCAATAGTCAGATAATCAAGCGCGAGGAGCCCGAGCCTATACTCTGCGAAACGAATCTCAACATTCCGGACTTTAATCTTTTCGAGGATATTAACATGCAGCTTTCAGGCCAGAAACCAGTGCCAAGTCTAATGCCTCTTGGTGGTGGTGGAAGCGGATGTGGTAGTGGCCAACTCGCTGGCAAGTCCTCGAAATATTCGAGGAAGGATTCGCGCAAGGTGTACGATGAGTCGACGAATACCGAGTGCACTTGTGAAGTTTGCGGTAAACAATGGCCGGCCAAGAAACATCTCTGGCAGCATCTAATTCGTTTCCATAGGGCGGAAGCTGCGGTCACCTGTGGCGTCTGCCTCAAACTTTGCGCAACGTACGATGATTTATCCGACCATTTGAAGAACGTGCACCCGGCTATTCTATCGACCGCGGGCAACAACTTCACCTGCAAGATCTGCGGTCGCTACCACAACGCTCGCAGCAAATTACTTCTTCACATGGGCATACACATCAATTGTAAGGGTAACATCTTGTGCCAACGCTGCAACCGTACCTTCGAAAACGACGAGAAGCTGAAAGAACACATTGCTACCTGCATGGGTGCACGCGAGGGTGCCGAGGGTGCAGGTGACGAGCAAGGGGTTAAAGAGGAGATTGAGGAAAAGGGCAGCCTCATCGGCGACGAGGaggaagatgaagaagaggaCAACGAGGAGGAAAATGAGTACGAGTCCGATGAAGAAAGTGGCGCAGCTCGTGACTCTGAGAACGCCGATAGTAGCTCCAACGATTCGGACAGTAGTAGTAATAGCAGTAACAGCTCGAGCGATGACGACGACAACAGCGACGACGAAGACGGCAGCGAAGCTGGTCGATCGCGCAATATTGATGAGGACAGCAGCAAGGATTCAGATAACGTAGGCCAGATGCCTCGGCAAGTAAAAGTCGAGGACAACGAGACAATGAGCCTTGGTGACGAAGAcgaagaaggagaggaaagcGATGAAAAACCTCGCTACGAGCCCGCACTGTCCGAATCGGAAGATGATAAGTACCTCAAAAAGAAACGCGAGCAACAGCAACGCGAAATTAAGGATAGATACAAGCTTGCCCAAAAGGAGCCAATGCTCGTCAATTACACAGAAGACGAGGGTCCAACGGTACTTAGTCCTATGCTATCTGCGCCTGTGCCCAGTAACAATGACGCTAAAAATGATAAGAGCGATTCGAGCGCTGAAGAAAGTAGTAATGAGGAGGCTGATGAGGATTCGGATGACGATGGTGAGGTTGTACAGCAAGCAGAGGTCGTCGATCCCAATGGCGCTTTCCATGCAGATAATTCGAGGAGTAGTAACGaagGTGAAGAAGAGCAAGATGAAGGTGAAGAGCAAGAAGTTGAAGAAGagcaagaggaggaagaagtcGAGCAGGAAGAAATTGGAGAAGTAGAAGAGCAAGAAGTCGAGGAACAAGAGGTGCACGAAGAGCATGAAGAACAAGAATTAGAAACCGAAGAGGTGGGAGACGATCAGCACGGATTGAACGAGGCCGAAGTACTTGAAGTTGACGAGAACGATATGCACAACTTGAACGGTACCGTGCTCATGCTAGCCAATGATGCGGATGGCAATCAAATTCTTATCGAGCGTAATATGGCCGACCTTGAGAACGACGACTCGGTTCACGATATGGCCCAGTACGTCTTCCAAGACGGTACAGGTTTTGCGCTCGAAGATTATGAGGCGATAGTCGAAGGCGGACAGTCAGACGACGAGAATGGTGAACAGCACCATCATCAGGGCTATGAGATGGAAATCGGTCAAGCGcacgaagaggaggaggtgatCGAAGGAGAGCTTGAAGAGGAAATGCACGAGGTCGCGGAGGAGGTCGAGGCCGAGGAAGTGCATGAAGAAGAGGTGGTCGAGGccgaggacgacgacgacgacgatgaagaCGGGATGAGTGCCAAAAGCTAA
Protein Sequence
MQAPLPTGKYHELCRLCATFDAAKLDLFGQEGKNRQLVEKIQTLLPFKIREEDKLPKCLCFRCMFKLEGFFDFRVACLQAEEVLSKHWDKFDESKVKLESSEDAEPYSELRMELLKDKESAPAPMLMPEVPVVNPNAALGTPPRLKSDGEPEMEEIVPPGAAGIAEQQQQQQHTMLGHHLAGGGGQAAAEEPEDHDRSDEYEMDMETNPSDFLEMSAMVPEEEHVPLPIQPPPPQQEVFQHRNEQHEVYVCSLCSKAFSSKGHLSLHARIHVGAGDGAVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGQPPPPEMAAQYMQQQHESRFHCKICPKTFANVTEYNKHSRICLNEQQRKEAAAANNSYNPQNFCKCEFRQTKLKSALEATSDMSSLDSDYESKDYKSAEAKLAKNPQLTILKQALIKGDSVKKEYDERQKMLSKQKKQVNAANKDIPDLDMKRWYCEACPLNFATVDELRQHEKTHDMEKPYICILCEKDFALKSSLSRHIVSSHGVDPTPLIESDKCLKKSVKGINNEGPPVIKQEDSNTKDNSESPYSDNMDNDDDEHENGNENMLEVETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGICLKICGDNTQLMNHVSMYHGASQLAMSEQRRYSCTICGRQHDSRKKLITHVSIHNIDPSYDASRFVQLNANYYNENVNSNEGNELIMDCDDESEKVDCYICYKPFPNEDQLIRHQRNAHKTESMMGEYSGNGDPAGQNGNINRAQYHLFFVCELCGSSHPSKWERWLHVSSAHENELAIKCERDDCAKIFATKALRNEHAQHHQLQGSSPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPDVLQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEAFNPAATNSSLIIHDALNEMSPESMQLDNGLPPQPIEPSGTMDLSCEDCDIKFPSLEDLCNHRRLVHNRFPCDLCNKFYYRSSHLWKHVNRVHKGHEDVTCRYCFKTSASRDHLAAHIAKIHRYEPDVKNDLALRDAMQVNYIKSSGGSVYGEANDNEEDGLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRMHHMHHPDLTCEYDNCRKLFRTKEDLESHRKDHKHHGSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHTGVLDRPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDLRSHYEHVHNIPKDQLDAFQYRLEVAGNKMDDYDLGPLEVVVKEEPEELDFDVDAFDDDNGNSNDSKRRRSVSDTFDCEMCPEIFLNYELLSSHYRNVHNTDPQRIYKRMRIESPTAKAKKKMRERENYECKNCQKQFCTKPLYLDHVNMCTRKSMPPTTSILEAHLKGNSQIIKREEPEPILCETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGGGGSGCGSGQLAGKSSKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCATYDDLSDHLKNVHPAILSTAGNNFTCKICGRYHNARSKLLLHMGIHINCKGNILCQRCNRTFENDEKLKEHIATCMGAREGAEGAGDEQGVKEEIEEKGSLIGDEEEDEEEDNEEENEYESDEESGAARDSENADSSSNDSDSSSNSSNSSSDDDDNSDDEDGSEAGRSRNIDEDSSKDSDNVGQMPRQVKVEDNETMSLGDEDEEGEESDEKPRYEPALSESEDDKYLKKKREQQQREIKDRYKLAQKEPMLVNYTEDEGPTVLSPMLSAPVPSNNDAKNDKSDSSAEESSNEEADEDSDDDGEVVQQAEVVDPNGAFHADNSRSSNEGEEEQDEGEEQEVEEEQEEEEVEQEEIGEVEEQEVEEQEVHEEHEEQELETEEVGDDQHGLNEAEVLEVDENDMHNLNGTVLMLANDADGNQILIERNMADLENDDSVHDMAQYVFQDGTGFALEDYEAIVEGGQSDDENGEQHHHQGYEMEIGQAHEEEEVIEGELEEEMHEVAEEVEAEEVHEEEVVEAEDDDDDDEDGMSAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00878314;
90% Identity
-
80% Identity
-