Basic Information

Insect: Anagyrus pseudococci
Gene Symbol: -
Assembly: GCA_030522585.1
Location: JAPYYQ010001353.1:2672-5686[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0006 0.086 14.2 0.2 1 20 60 79 60 81 0.94

2 13 0.00014 0.02 16.2 0.2 1 23 161 184 161 184 0.94

3 13 0.00011 0.016 16.5 3.9 2 23 191 213 190 213 0.95

4 13 3e-05 0.0043 18.3 4.0 1 21 220 240 220 241 0.95

5 13 3e-08 4.4e-06 27.7 1.7 1 23 252 274 252 274 0.98

6 13 9.5e-06 0.0014 19.9 0.7 2 23 284 305 283 305 0.97

7 13 0.026 3.7 9.1 0.7 2 23 312 333 311 333 0.97

8 13 1.3e-06 0.00019 22.5 2.5 1 23 339 361 339 361 0.99

9 13 3.3e-06 0.00047 21.3 1.5 1 23 367 389 367 389 0.94

10 13 1.4e-05 0.002 19.4 1.4 1 23 395 418 395 418 0.94

11 13 1.7e-06 0.00024 22.3 1.2 1 23 424 446 424 446 0.98

12 13 6.7e-08 9.6e-06 26.7 2.0 1 23 452 474 452 474 0.99

13 13 6.7e-06 0.00097 20.3 0.9 2 23 481 503 480 503 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0006	0.086	14.2	0.2	1	20	60	79	60	81	0.94
2	13	0.00014	0.02	16.2	0.2	1	23	161	184	161	184	0.94
3	13	0.00011	0.016	16.5	3.9	2	23	191	213	190	213	0.95
4	13	3e-05	0.0043	18.3	4.0	1	21	220	240	220	241	0.95
5	13	3e-08	4.4e-06	27.7	1.7	1	23	252	274	252	274	0.98
6	13	9.5e-06	0.0014	19.9	0.7	2	23	284	305	283	305	0.97
7	13	0.026	3.7	9.1	0.7	2	23	312	333	311	333	0.97
8	13	1.3e-06	0.00019	22.5	2.5	1	23	339	361	339	361	0.99
9	13	3.3e-06	0.00047	21.3	1.5	1	23	367	389	367	389	0.94
10	13	1.4e-05	0.002	19.4	1.4	1	23	395	418	395	418	0.94
11	13	1.7e-06	0.00024	22.3	1.2	1	23	424	446	424	446	0.98
12	13	6.7e-08	9.6e-06	26.7	2.0	1	23	452	474	452	474	0.99
13	13	6.7e-06	0.00097	20.3	0.9	2	23	481	503	480	503	0.95

Sequence Information

Coding Sequence: ATGAGCGAAGTCGTAGAAATCCTCCAAGTGGACAGCAATTACTTGCCGCAAGACGGCGTTAACGTTGTTGATGACTTGCTTGACAAAAATGGAGCAGATACGTTTATTCTGCCTGATATCATAGATGGGTCGGAAGtTATTACGCACAATGGACAGATTGTACAGATTATTGCTGATTATGAATGTGTTACTTGTCATCGAGTATTTACCAGTGATGATTTGCTGAAAGAACATTTAGAAGTATGCAGAGAAGAAGATGACGATGTAGATATTTTAGAGCTAGGTAGGATGGATGATGATTCCGAAGATGAGGAAGATGAAGATGATAATATTAATGATTCAAATTACAATACTGATTCAAATCCATATGATTCTCAAACattcaaaaacaaagataaaaaggTTACTATTAAACCAGTACCTGAAGGTCAATGTCATTGCTGTGCAGAAGATGTAAAAATTGCTCATTCAGGAGGTCCCTTTCAATGTGAACTGTGTGAGCTGTCATTTAAGAAAGCAGTTTCCTTAGAAAGACATACAGTAGTTATCCATTGGGAATGTGATACATGTACTTGCAAAGAATGTGGGGCAAGTTTTCGAGACAAAAAATCTTTAGATAAACATCGCTATACAACTCAcatgaaaactaaaaaaatatataaatgtgaTAAATGtgatacttatttttcaagaaGTTATCACTTGAATCGCCACAAACAGCAATCAGGTTGTCATGGCAATActagtaataatttttcatgccAGgTCTGTAATAGAGTTTTTACACGCAAAGATAATTTAAGAGAACATTTGAGAACTCATGCTGGAATGccacaaagaaaaaagaaatcttgCAATCTATGTCCAAAAGAGTTTTATACCAATCAGCAACTTATTATTCATCAACGAATGCATACTGGAGAAAGACCAGTACAATGTGATTTATgcccaaaaaaatttttatctacatTGGCTATGAAAAAACACAGAAGAGTTCATACTGGTGAAAAGCCTTTtgaatgtaaatattgccaaaaaaaatttgctgcAAGAGAAACACTGAATCGTCATCAAAGAACACACACTGGAGAAAAACCTCATGCCTGTCCATATTGCAACAAATCATTTATCCAAGCAGCTCAATTGAGAGCTCACATATTTCATCACACAGGTGAACATGGTTTTTATTGTGATATTTGTGGAAAAGCATTTAATCGTAAAGGACGACTCACTAGTCATAAGAAATTCGTTCATGAAGGTGCTACACCATTTAAATGTGAAGTATgtgaaaaaacttttataagaAAGGAAGATTTATCTAAACATACCAATCTTCATGCTGGAATAAAACcCTTTAAATGCGATACTTGTGGAAAATGTTTTGCGGCAAAATCATCACTTCAGGCGCATATGAATACTCACAGACGCGAGCCACCACAATCCTGTGCTGAATGCGGAAGAGCATTTATTCGTCAAGATTGTCTTATGCGTCATATAAGAGCAAAACATAGAGACCTTTTAGAAGAAGTATTGGGAGAAGCAGAAAAGAAACATTTGCAGTTGCAAATGTTTAACATTGCTTACACTGCTgccgaaaaagtaaaacatgGAGAGACAAATATTCTTTCAACAGATGAGTTATTGAAAGCTATAACGGAACTTTTAACAATacttattgaaaaagaaacactAGAGctatTTGGCTGGTTGCAATCACCACTACAAGATGTATTAGATGCTGTCATTAGAAGATGTGGATATGAACCATTGGCAGCAGACAGTGACTTAACATTACCAGAAAGATTAAGAGGAAATGTTAAACTTTTATTCAATGCTGTATTAGAAGATGAAAGTGTCAAATCTTTATTGACAACTCAAACTGTAGATGAAGTAATTATGCACGTCCTTAATATAtcaaaaaacaacaaatctGACTTAATTGAAGTcgatgtaaaagaaaaataa
Protein Sequence: MSEVVEILQVDSNYLPQDGVNVVDDLLDKNGADTFILPDIIDGSEVITHNGQIVQIIADYECVTCHRVFTSDDLLKEHLEVCREEDDDVDILELGRMDDDSEDEEDEDDNINDSNYNTDSNPYDSQTFKNKDKKVTIKPVPEGQCHCCAEDVKIAHSGGPFQCELCELSFKKAVSLERHTVVIHWECDTCTCKECGASFRDKKSLDKHRYTTHMKTKKIYKCDKCDTYFSRSYHLNRHKQQSGCHGNTSNNFSCQVCNRVFTRKDNLREHLRTHAGMPQRKKKSCNLCPKEFYTNQQLIIHQRMHTGERPVQCDLCPKKFLSTLAMKKHRRVHTGEKPFECKYCQKKFAARETLNRHQRTHTGEKPHACPYCNKSFIQAAQLRAHIFHHTGEHGFYCDICGKAFNRKGRLTSHKKFVHEGATPFKCEVCEKTFIRKEDLSKHTNLHAGIKPFKCDTCGKCFAAKSSLQAHMNTHRREPPQSCAECGRAFIRQDCLMRHIRAKHRDLLEEVLGEAEKKHLQLQMFNIAYTAAEKVKHGETNILSTDELLKAITELLTILIEKETLELFGWLQSPLQDVLDAVIRRCGYEPLAADSDLTLPERLRGNVKLLFNAVLEDESVKSLLTTQTVDEVIMHVLNISKNNKSDLIEVDVKEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00691361;
90% Identity: iTF_00878309;
80% Identity: -