Apse010703.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anagyrus pseudococci
Gene Symbol
Hr39
Assembly
GCA_030522585.1
Location
JAPYYQ010002441.1:3878-7408[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 3 3.4e+04 -5.7 11.2 35 157 32 159 18 178 0.39
2 5 0.79 8.9e+03 -3.4 0.1 86 131 236 285 202 296 0.53
3 5 1 1.1e+04 -3.7 17.6 56 168 315 422 302 462 0.55
4 5 0.98 1.1e+04 -3.7 4.6 83 162 448 539 424 553 0.50
5 5 3e-78 3.5e-74 251.6 0.0 1 408 619 1005 619 1005 0.79

Sequence Information

Coding Sequence
ATGTCGGATCAAAGCGGGCCCGGTGCCGGCCCGGAGCCGAGCCCGACGCCGGCCTGGTGGCAGCCGGCTGCTAGCCAGTCCTGGAAGTCCACCTCGGCCGCGCATCACAGCAATcatcaccatcaccaccacaacaacaacaacaacaataataataacaataatagcagcagcagcaataataataatcatcatcACCACAATCATCATCACAACAATCATCATCAAGCGAGCTCGACCGGTGTCGTGCGCACGGCCGAGCACGGGAAAAACGTCAGCGTCACTACGATCAATGTGCCGCCGGCTAATCTTCACGAGATGCACGACGGTAAAAGCGTGTGCAAGTACCTCAGCGGCCAGAACGGGGTGACAGTGTCGGTCGTGTCGAGCTGCAGCccaagcagcagcggcggcggcggcagcgtaTCGACGAGCACGAGCAACGGCAGCCCCACGTCCTCGACCTCGGCAGCGTCGGCCGGAGCTGGAGCGACGAGCGGAACGATGCCGAGCTCGACGACGCCGGGCCCGAGCGGCGTACTCGACTCGGCCGAGTCCGGCTGCTCGGTCGACGAGCCCGACAGCGACGGCGAGGTCAGTCGGATCGACTTCCGGGGCGTGAACCTGCGCACCAAGCGCCGGACCGCCGAGGCCccggaggagcagcagccggagCGCCCGATGTCCTGGGAGGGCGAGCTCTCCGACCAGGAGATGTCCTCGAACACGCTCACGGGCCAGGAGGACGAGCACGAGGAGACCTCGATGGAGGGCGTCCAGGTCTGCGGCGCGAGCCCGGCACCCCACGAGCCCAAGTTCCCCCAGGTCAAGCAGGAGCAGCCGGACTTCCGATCGAGTCCCGGGCCCCCCCTTCAGAGCCTCGCCCCCACCCCCGGCGGCGGCGCCGGACTCAGCGAGACTATCCTGCCCGTACCAGCCcaagcccagcagcagcaactccaccatcatcatcatcaccaccaccaccaccatcatcaacagcagcagccgcagcaatcgcgacagcagcagccaaGTAACGAGCAGAGCCAACAGAGCGACCTGCCACTCCTCGTCGACAAACTGCTCGGCGGCTGCAACAACTCCACGCCCAATCACAGTCCGGTACTCGTGCCTCGGCATCACCTCACCAAGCACAGCCACACCAGATCTCAGGTGCCATCGCCGGACTCGGCGATCCACTCGGCCTACAGCGTGTTCAGCTCGCCGACGCAGTCGCCGCACGCCGGGCGACACTCGGCCCTCGGGCCGGGCTCACCCGtgccctcctcctcgctctctctctcccggcacAGCTTCAACAACTCGAGCtcgtcgctctcgctctcgcactcgctctctcgcaacAACTCCGACGCCTCGAGCAGCTGCTACAGCTACGGCAGCCTCAGTCCGCCGAGCCACTCGCCGGTCCAGCAACGCCACGCCCACcacctccagcagcagcaggctctCCATCTAGCCGGCAATCCCagctccgctgctgctggccatCACTATGGCACGGCTAGCTCGGCCGCAGCCCCCGACACCGGGGAGGCTCACCTCGGCGACGACCAGGACGATTGCCGGATAACCTCCGCCCCCTCCGGCATCTCGACGCGCCAGCAGCTCATCAACAGTCCCTGCCCGATCTGCGGCGACAAGATCAGCGGCTTTCACTACGGCATATTCTCGTGCGAGTCGTGCaagGGCTTCTTCAAGCGTACCGTGCAGAATCGGAAAAACTACGTGTGCCTGAGGGGCGCAGGCTGCCCGGTGACGGTGGCCACCCGAAAGAAATGCCCAGCCTGTCGCTTCGACAAGTGCCTCAACATGGGCATGAAACTCGAAGCGATCCGCGAGGACAGGACGCGCGGCGGGCGTAGCACCTACCAGTGCACCTACACCTTGCCGGCCAGCCTGATCGGGGCATCGGGCTCGATGCCGCCCGCTGGGCTCAACGTTGACAAGCTCGCCCAGCCCGGGCCCTGCAGTCCCGCGGCCCCCGGCACCGAGCACCATCATTCCGCCAAGCATCATTCCAGCCACTCGCACAAGCTCCAGCTGGTGCCCCAGCTGCTCCAGGACATAATGGACGTGGAGCACCTCTGGCATTACAACGACAACGAGCGTGTTGGAGCCAGCCAGGCTATGGGCTCGCTCAATCTCGCTCAGACTCTGCCGAATGTAGGGCTGAGCGGCAGCGGTAACAGCACCGACTCGTTAAGCGCCTCGAACGGCGGCCTTGGAAGcagcgcgagcagcagcagcagtagcagtcgAGGCGAGCCTGCGCGACCAGCTTCATCCAACTCCTCGACCCCCACGCCCAGCCACGAGTCTCACAGGTCTCAGCACTCGCCGGGGCCAGCGATTGCCCAGGCATCCAATTCAGCTGCCAATGGAAATCCAACCCAGCATCCGGACTTTTTGTCGAACCTCTGCAACATCGCCGACCACAGGCTGTACAAGATCGTCAAATGGTGCAAGAGCCTGCCTCTCTTCAAAAACATATTGATCGACGATCAGATTGCTCTCCTCATCAACTCCTGGTGCGAGCTGCTTCTCTTTTCCTGCTGCTTCCGCAGCATGAGCACGCCCGGCGAAATCCGAGTCTCCCTTGGCAAATCCATCACCTTAGAGCAAGCCCGAGAACTTGGACTAGCCACCTGCATCGAGAGGATGCTCGCCTTCACCAATAATCTCAGACGATTGCGCATCGATCAGTACGAATACGTCGCCATGAAGGTTATCGTGCTATTGACCTCAGACACAAGCGAGTTAAAGGAGCCCGAAAAGGTTCGGGCTTCTCAAGAGAAAGCCTTGCAAGCGCTCCAGCAGTACACGATCGCCAGGTATCCGGAGATGCCGGCTAAATTTGGCGAGTTATTGCTTAGGATTCCGGATCTTCAGCGCACTTGCCAAGCGGGTAAGGAGCTGCTCAGCGCAAAACGGGCCGAAGGCGAAAGTTGCTCTTTCAATTTACTTATGGAATTGCTTCGAGGGGACCACTGA
Protein Sequence
MSDQSGPGAGPEPSPTPAWWQPAASQSWKSTSAAHHSNHHHHHHNNNNNNNNNNNSSSSNNNNHHHHNHHHNNHHQASSTGVVRTAEHGKNVSVTTINVPPANLHEMHDGKSVCKYLSGQNGVTVSVVSSCSPSSSGGGGSVSTSTSNGSPTSSTSAASAGAGATSGTMPSSTTPGPSGVLDSAESGCSVDEPDSDGEVSRIDFRGVNLRTKRRTAEAPEEQQPERPMSWEGELSDQEMSSNTLTGQEDEHEETSMEGVQVCGASPAPHEPKFPQVKQEQPDFRSSPGPPLQSLAPTPGGGAGLSETILPVPAQAQQQQLHHHHHHHHHHHHQQQQPQQSRQQQPSNEQSQQSDLPLLVDKLLGGCNNSTPNHSPVLVPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAGRHSALGPGSPVPSSSLSLSRHSFNNSSSSLSLSHSLSRNNSDASSSCYSYGSLSPPSHSPVQQRHAHHLQQQQALHLAGNPSSAAAGHHYGTASSAAAPDTGEAHLGDDQDDCRITSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPASLIGASGSMPPAGLNVDKLAQPGPCSPAAPGTEHHHSAKHHSSHSHKLQLVPQLLQDIMDVEHLWHYNDNERVGASQAMGSLNLAQTLPNVGLSGSGNSTDSLSASNGGLGSSASSSSSSSRGEPARPASSNSSTPTPSHESHRSQHSPGPAIAQASNSAANGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNILIDDQIALLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARELGLATCIERMLAFTNNLRRLRIDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGESCSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00073811;
90% Identity
iTF_00073811;
80% Identity
iTF_00073811;