Atra018256.1
Basic Information
- Insect
- Amyelois transitella
- Gene Symbol
- dmrta2
- Assembly
- GCA_032362555.1
- Location
- CM063573.1:7261352-7276995[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-28 3.1e-24 85.2 10.8 1 47 36 82 36 82 0.99 2 2 2.4 1.3e+04 -3.3 0.0 6 10 156 160 156 164 0.76
Sequence Information
- Coding Sequence
- ATGGAGATGTCTCTTCCCAACGGCGTGGACGTGTCCCAACTAGTTCAGCACCCGGTTTTGGCCGCGTTGCCGCCGTTCTTCCTCAGGGCGTCGGAGAGGTAtcagCGGACGCCGAAGTGCGCGCGCTGCAGGAACCACGGCGTGGTGTCCGCGCTGAAGGGCCACAAGCGCTACTGCCGCTGGCGGGACTGCGTGTGCGCAAAGTGCACTCTCATCGCGGAGCGGCAGAGGGTCATGGCTGCTCAGGTGGCGTTGCGTCGCCAGCAAGCGCAAGAAGAGAACGAGGCGCGGGAACTGAACCTGCTGTACGGCGCAGCGCCGGCCGCCGCGCCGCACTACCCCGACATTGGCGACGACACCTCTTCTTCTGCCCCCGACCTTGCGGAAGACCTGTCGATTTCAGAAGCCCCCAAGCTGTTCCCTGGGGCCGTCGTGTGTCGCCGGAGACCCACCCTGCGGCCGCGAGCGCGTTGCAGACAAACAGTTTATCTTTCCGCCGTGTGCTCTGTAAGATACACAGTTGCCATATACATAGACATGCCAGATACTTCTTCGTTGATTTAA
- Protein Sequence
- MEMSLPNGVDVSQLVQHPVLAALPPFFLRASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELNLLYGAAPAAAPHYPDIGDDTSSSAPDLAEDLSISEAPKLFPGAVVCRRRPTLRPRARCRQTVYLSAVCSVRYTVAIYIDMPDTSSLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -