Atra019995.1
Basic Information
- Insect
- Amyelois transitella
- Gene Symbol
- egg
- Assembly
- GCA_032362555.1
- Location
- CM063577.1:2434774-2467674[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.97 3.4e+03 -1.6 0.1 17 38 1272 1302 1270 1304 0.72 2 2 8.4e-13 2.9e-09 37.0 0.0 4 75 1334 1398 1331 1400 0.89
Sequence Information
- Coding Sequence
- ATGAAACGAGCAGATCATATTTTACaactattaaataataactgtAATGAAAATAAGAGGCAAGAACAGTATGAAGAGATGGGAACCGGAAGTTCTGAAGCGTGTGAGAAGGAAAACTATTTACAACCACTGAATAAGGCGACGGATGAAGGTATTGGTATAAATTCTGTAATTTCACCGCAAGTCGGACCTGAACAGCGGATTTTAGCACCAATGTCACAGAACACGAGAGTTCGGTCTAGTAGTACATCGTCATCCAGTTCTTCCACATCAACATCTTCAAGCTCCAGTTCATCGTCATCATCGGCAGAGGCTTCTACATCGGCGAAACAGTACAAACATGACGTGAACATTGACAGCTCACCTTCAGTCATACCAGGTACTCCAGAGCCTTCGACTAGCAAAAAACGTTTAGATGCAGTCATCAACTACCACCAATCCCCTGTGAATTCTGAAGAATCAGACGTTGATCTAAGTGATACTGATCCCACTTATAATATCTCATCAACACAACCACCACGTCGGATTAGTTCATCAACCACCATGTCAGATAGTGAAAATGATATAAACGATGCAATTGTTTCATATGAATTAGTTCCTCAAACCAAAAAATCTAGAAAGCGCCTCCGCAATCCATCTCAGTGGAAACAAAACATCGTGAAATCGCTTCGAAACAGTGGGAAAGCCTATAAATCACTCTCAAAATCTAATAAAGAGGTCCCTGCTAAAAGAGTAAAAGATAGTTGCGTTTGTAGATTTCATTGTTCTGATAACATAACACCTGATAAGAGACGCGAGATATTCGACTGTTATTGGAAGCTTAGTAATATAGACTTGAAGCGATCATTTATCCAATCTTGTATGATGGAGGTAAACCCCAAATATAAGTACACTAATGCTGCCAATCCTCGCAAACCAAATACGGCCTTTTATTTTACTCTTGATGGCAAAAAAATCCGCGtatgtaaaactttttttataaatactttagaCATAACAGAAAGACAAATAAGAACTGTGAAAATGAAAACTAATTCCACTGGATTTGTAGCAGAAGATCTTAGGGGCCGTTCTAGAAGCCGAGCGCCGATCGATCCAAGTCTTGTACAAGATATCAAAAACCATATTAATAGTATACCGCGCATAGAGTCCCATTATCTTAGATCTTCTACTACAAGAGAATATATTGATAGCAGCAAGAGTATAAAAGAACTATGTAGAGACTTTAACACAAATCAAACCAAAGAAAACAAACCCCACGCTGTATACTGGATCTATTACTTGATATTTACAACTGAATTTAATATAAGCTTCTTTCAACCCAAAAAGGATTTGTGTGATTTATGTACAAGTTATGAATTAGCATTATCAGAAGAAAAGTTAGGTATACAAGAAAAGTATGAAAAGCATATTAAAGAAAAGAATCTGTGTAGAGAGGAGAAGAGAAATGATCGTTCTAAcattaatgaaacaaatatttgcGCCGTTTACGACTTAGAAGCTGCAATGACTTGTCCTAAGGAGAGTAGCAATCAAATGACAGCGGAGCATTCAGAAGACTCAAATGCACAGCTGGATAAAGAAGACGGACAGACGGACAAGGTAGAGAAGACTCCCACTCCGGAGCGAGAGAAGGAGTTAAACTTTGCTGTAGTTCCTGCAACAAGCAATGAAGGCGGTGATATGGAAACGCAGATCGCTGAAGATTCACCAGAAGTACAACAAACAATCGCAACGGAAGCTTCTGAAAAAGAACCTAAAGAGGTGgaGCTGTTACCGGAAATCACAGACGCACAAACAACAATATCGGATCAGGAGACCCAGGCGGCCACTAATAGTATCCTGAAGGAGTTACTCGAAAAAGAAGCTACTGTGCCTGCGGTAAGGTCGGGCAGTCTGTCGACGGGAGTGGTGGATGTTGAAGGCAGCTCGTCTGAAGATGacataCAAGAAGTGAATAAAACAAATGCGACTAAAGAAATTGCATCTGTTGACGTGAAGGAGGAATCTAAGCCGTTGTCAGTAGACataaaatacgAAGCAGAAAGTGTGCAAAAGAAAAATACACCCGAAACAGAGGAAAAGGTGAAGTTGAAGCCAAAGACTGAATGTGCAGAAGTATTCAGTTTGGATTCGGACGAGGAAGACGCGCCAGTTATCGCCGGtgAAATAACGATAGCGGACAAGCCTCAAGGCAACAAGTGCATCAACCCGCtgtgcggcggcggcgcgcgcgcacgctgCGCGGCCGCCGACAGCGCCGCGCGCGGCTGCTACGGCGCGCACAACAAGAGGAGCTGTAAAGTGTGTGCGGCGTGCGCTGAGGCGGCCGCCGAGAGGTCTCAGGGCCTAATGAAATGCATCAAAGATTTCACTCCACTCCTGAAGATGGATCTTCGCAAGGTCTCCTCGGAGACTGTAGAGATTTCCGACTCGGACTCTGACGACGGAGACGTGGAAATGCCGACTGATGCCATCGGGGAGAACGGTGTGAAATTCCTAGAAGATAATTTGGCGGATGTTTTGAACGAGACGTGGATCAAATACAAGCTGGACGAGCGGCTCACCGACGCTCAGAGCGAGCTGAACGATGAGCTGAACAAGCTGGAAGCGGAGAGCAAAGAAATAGACACAATGCTGAACGAATGCCAAGTTGCAACGGATCTGCTTCGCAACCAACTGTACGCCACCTTCGAGCCGGAGAGAAGGGAGTTGACCGCCATCAGCATAATTGATACGCCTTTGGAGAAATACTCGTACTCCGAGACTAAGGGAGCAACAATGGAcAGGAGCTTAAAACGTCGAACCACGACCGCGAGCGATCAGCCCGCCAAGCGGCTCGCTATACCGCTGGGGTACACGCCTAATGATGCTGATGAGTCGAAATCTACCAACGCGGACGGTGGTAACGATGAAgatAAAGACATATCTGTGGTGAAACTGTCGGCGGAGGCTGCGCCCTCGGATTTGCCGCCGCCGGGAGAGATAACCCGCCCCCCGCTTCGCACCGGCCTGTCAATTTTTGCCATGAGAAACTCCTTCTGCACGTGGGCGCCGGCCAAGATTGTAGAAATATTGCCCAAAAACCCAGCGATCGGTGTCACGACGTGTCGCGTGAAATTTGAATCAAAAAGTAATATCACAACACGCATCCTAGCCGCCAGGTGCCTCGCTTACATCGACCCCGCTGACGTTAGATTGACTATTGGTACCCGCGTGATAGCGTTATCTAAAGAGAACATAAAAGCCGGAGAGCCGGCCAACAACAAGAGCTTCTACTCGGGAATAGTCGCAGAGATACCTAACCCGGTCAATAATTACAGATACCTGATATTCTTCGACCACGGCTACGCCCAGTACGTCCACCACCGCGACACGAGGGTAGTGTGCGAGTGCTCCAACCTGGTGTGGGAGGAGGTACATCCGAACTCCAGGGAATTTGTCAAGCAGTACCTGCTGGCGTACCCCGAGAGACCCATGGTCAGGCTTCACGCTGGACAGAACCTTAAGACCGAATGGAATGGGAAATGGTGGATGACCAAAGTGCTCCAAGTGGACGCTTCCTTGGTGGAGGTCTCCTTCGAGGACAACAGGACGGAGTGGATCTACAGGGGCTCCACCAGGCTGTCCCCGCTGTTCCTGGAGCTGCAGGCTGCTGAGAGACAGCGAGCCAGGCCTTTACCCAGGAGCAGTCAGAGAAGAATGAACATGCCGTATGTGGAATACACCAGGTCGGAGGAACAGAACAAGGCTGAAACGGCAGCGGCCGAACAAGCGAGGGTGCTACAACATAATGAGGAGCTCCGGCGGCAGCGCGCCGTGGCCCGCAAGTCGacggccgcgcccgcgccgcccgcgccgcccgcgcccgacgccgtCACCAGCCGCGTCGTGTACTACACGCCCAAGAACGCGGTGAAGCCCCACAAGATGGCGCCGCACACTTGCTCCCCGAAGTGCAAGCGGAGCGATGTGCTGGCCCTCCAGGACCTCAGGACTTACAACCCGTTGGCCAAGCCGTTGCTCAGCGGGTGGGAGAGACAAATAGTCCGGTTCAAGGGGCACAAGGAGGTGATGTACCGCGCGCCGTgcgggcggcgcgtgcgcagcctGCGCGAGCTGCACGGCTACCTGCGCGCCGTGCGCTCCGACATGGCCGTGGACCTGTTCGACTTCTCGCCCAGCACCCACTGCTTGGCCGAGTTCGTGCTCAACAAGTGTCTCGTGGGCAAAAAGGACCTGTCTCACGGCAAAGAGAACGTGCCGGTGCCGTGCGTGAACTATTACGACGAGTCGCTGCCGGAGTTCTGTTCTTACAACACGGAGCGGACGCCCACCGCGGGGGTGCCGCTCAACATCGACCCCGAGTTCCTGTGCGGCTGCGACTGCACCGACGACTGCGAGGACAAAACAAAATGCGCGTGCTGGAAAATGACGCTAGAGGGCGCACGCACCATCGGTTTGGACGACAACGTGGGCTACCAGTACAGAAGGCTACCTGAACCCTTACCTTCGGGGATTTACGAGTGTAACTCCAGGTGTAAATGTAAACAGACTTGTCTGAATCGGGTGGCGCAACATCCACTACAGCTTAAATTACagGTGTTCAAAACCTTGAACCGCGGCTGGGGGATCCGCGCTTTGAACGACGTGCCCAAGGGTGCCTTCCTCTGCGTGTACGCAGGGAACTTGCTCACGGACGCTACGGCTAACTTGgaCGGCTTGAACGAAGGCGATGAATATTTAGCCGAGTTGGATTACATCGAGGTGGTGGAACAGATGAAGGAGGGCTACGAGGAAGATATACCTGAAGAGGACAAGAAACTAGACCGGAAATCATCGAAGTCATCAGAAGAGGAGTCGTCATCGGAGGAAGAAGCGACCAACACGAACGAAGACAAAGAGGATGATGACTTCCAGCCAGGGTTCATTGGACATGGACTCACAGAATTCAGCAAACGTTTGCGTAAAAGAGATAGGACGAAAAAGAAGGACGCGGAGAAAGAGAAGGCGAAGGAGGTCGACAAGGGCATGGAGGACAACGGCTGCATCACCATCAGCGATGATGAGGAAGCAAAAGAACCATCTCAGTTTATGGCGCAGGCCGCCATCGGCGCAAACGAATTTGTACCCAAATATAGGTCCGTACGGTCTTTATTCGGCAAAGACGAGGCGTGTTACATCATGGACGCCAAGGTTCAGGGCAACATAGGCAGGTACCTCAAtCACTCGTGCACGCCCAACGTGTTCGTGCAGAACGTGTTCGTGGACACGCACGACCCGCGCTTCCCGTGGGTCGCGTTCTTCGCTCTGTCCCACATCCGCGCCGGCACAGAGCTCACGTGGAATTACAACTACGACGTCGGCTCCGTGCCCGGGAAAATGCTGTACTGCTACTGTGGCGCCCCCAACTGCAGGGGGCGGCTGTTGTAA
- Protein Sequence
- MKRADHILQLLNNNCNENKRQEQYEEMGTGSSEACEKENYLQPLNKATDEGIGINSVISPQVGPEQRILAPMSQNTRVRSSSTSSSSSSTSTSSSSSSSSSSAEASTSAKQYKHDVNIDSSPSVIPGTPEPSTSKKRLDAVINYHQSPVNSEESDVDLSDTDPTYNISSTQPPRRISSSTTMSDSENDINDAIVSYELVPQTKKSRKRLRNPSQWKQNIVKSLRNSGKAYKSLSKSNKEVPAKRVKDSCVCRFHCSDNITPDKRREIFDCYWKLSNIDLKRSFIQSCMMEVNPKYKYTNAANPRKPNTAFYFTLDGKKIRVCKTFFINTLDITERQIRTVKMKTNSTGFVAEDLRGRSRSRAPIDPSLVQDIKNHINSIPRIESHYLRSSTTREYIDSSKSIKELCRDFNTNQTKENKPHAVYWIYYLIFTTEFNISFFQPKKDLCDLCTSYELALSEEKLGIQEKYEKHIKEKNLCREEKRNDRSNINETNICAVYDLEAAMTCPKESSNQMTAEHSEDSNAQLDKEDGQTDKVEKTPTPEREKELNFAVVPATSNEGGDMETQIAEDSPEVQQTIATEASEKEPKEVELLPEITDAQTTISDQETQAATNSILKELLEKEATVPAVRSGSLSTGVVDVEGSSSEDDIQEVNKTNATKEIASVDVKEESKPLSVDIKYEAESVQKKNTPETEEKVKLKPKTECAEVFSLDSDEEDAPVIAGEITIADKPQGNKCINPLCGGGARARCAAADSAARGCYGAHNKRSCKVCAACAEAAAERSQGLMKCIKDFTPLLKMDLRKVSSETVEISDSDSDDGDVEMPTDAIGENGVKFLEDNLADVLNETWIKYKLDERLTDAQSELNDELNKLEAESKEIDTMLNECQVATDLLRNQLYATFEPERRELTAISIIDTPLEKYSYSETKGATMDRSLKRRTTTASDQPAKRLAIPLGYTPNDADESKSTNADGGNDEDKDISVVKLSAEAAPSDLPPPGEITRPPLRTGLSIFAMRNSFCTWAPAKIVEILPKNPAIGVTTCRVKFESKSNITTRILAARCLAYIDPADVRLTIGTRVIALSKENIKAGEPANNKSFYSGIVAEIPNPVNNYRYLIFFDHGYAQYVHHRDTRVVCECSNLVWEEVHPNSREFVKQYLLAYPERPMVRLHAGQNLKTEWNGKWWMTKVLQVDASLVEVSFEDNRTEWIYRGSTRLSPLFLELQAAERQRARPLPRSSQRRMNMPYVEYTRSEEQNKAETAAAEQARVLQHNEELRRQRAVARKSTAAPAPPAPPAPDAVTSRVVYYTPKNAVKPHKMAPHTCSPKCKRSDVLALQDLRTYNPLAKPLLSGWERQIVRFKGHKEVMYRAPCGRRVRSLRELHGYLRAVRSDMAVDLFDFSPSTHCLAEFVLNKCLVGKKDLSHGKENVPVPCVNYYDESLPEFCSYNTERTPTAGVPLNIDPEFLCGCDCTDDCEDKTKCACWKMTLEGARTIGLDDNVGYQYRRLPEPLPSGIYECNSRCKCKQTCLNRVAQHPLQLKLQVFKTLNRGWGIRALNDVPKGAFLCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEQMKEGYEEDIPEEDKKLDRKSSKSSEEESSSEEEATNTNEDKEDDDFQPGFIGHGLTEFSKRLRKRDRTKKKDAEKEKAKEVDKGMEDNGCITISDDEEAKEPSQFMAQAAIGANEFVPKYRSVRSLFGKDEACYIMDAKVQGNIGRYLNHSCTPNVFVQNVFVDTHDPRFPWVAFFALSHIRAGTELTWNYNYDVGSVPGKMLYCYCGAPNCRGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -