Basic Information

Insect: Amyelois transitella
Gene Symbol: lrrfip2
Assembly: GCA_032362555.1
Location: CM063552.1:11739826-11754340[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 6.1e-78 1.7e-73 248.2 20.3 1 295 121 403 121 405 0.88

2 13 1 2.8e+04 -8.3 16.5 1 44 404 447 404 488 0.79

3 13 1 2.8e+04 -52.0 61.8 108 159 608 660 464 791 0.48

4 13 1 2.8e+04 -27.6 35.0 108 256 651 795 633 833 0.59

5 13 1 2.8e+04 -53.2 63.0 109 248 824 916 716 1047 0.49

6 13 1 2.8e+04 -45.3 54.6 108 249 995 1089 890 1178 0.46

7 13 1 2.8e+04 -53.6 63.4 131 248 1105 1174 967 1306 0.49

8 13 1 2.8e+04 -44.7 54.0 108 248 1253 1346 1145 1435 0.45

9 13 1 2.8e+04 -32.4 40.7 130 291 1319 1476 1293 1520 0.46

10 13 1 2.8e+04 -27.7 35.2 108 256 1425 1569 1408 1607 0.59

11 13 1 2.8e+04 -27.6 35.2 108 259 1468 1615 1458 1651 0.57

12 13 1 2.8e+04 -26.6 34.3 108 257 1554 1699 1535 1737 0.57

13 13 1 2.8e+04 -9.6 21.9 108 237 1726 1857 1723 1859 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	6.1e-78	1.7e-73	248.2	20.3	1	295	121	403	121	405	0.88
2	13	1	2.8e+04	-8.3	16.5	1	44	404	447	404	488	0.79
3	13	1	2.8e+04	-52.0	61.8	108	159	608	660	464	791	0.48
4	13	1	2.8e+04	-27.6	35.0	108	256	651	795	633	833	0.59
5	13	1	2.8e+04	-53.2	63.0	109	248	824	916	716	1047	0.49
6	13	1	2.8e+04	-45.3	54.6	108	249	995	1089	890	1178	0.46
7	13	1	2.8e+04	-53.6	63.4	131	248	1105	1174	967	1306	0.49
8	13	1	2.8e+04	-44.7	54.0	108	248	1253	1346	1145	1435	0.45
9	13	1	2.8e+04	-32.4	40.7	130	291	1319	1476	1293	1520	0.46
10	13	1	2.8e+04	-27.7	35.2	108	256	1425	1569	1408	1607	0.59
11	13	1	2.8e+04	-27.6	35.2	108	259	1468	1615	1458	1651	0.57
12	13	1	2.8e+04	-26.6	34.3	108	257	1554	1699	1535	1737	0.57
13	13	1	2.8e+04	-9.6	21.9	108	237	1726	1857	1723	1859	0.83

Sequence Information

Coding Sequence: ATGATGGGCAAAGTATCCAAATTAGAAACACCAGGTAATAGTGACGAAGAAAGCGGAGACGCATTTACCGATGGCGATTTTGAAGATTCCGATGATGAGACGGTAGTTGAGAGAAATGGTAACGTCGAGCCGGCTCATATGCCAGTCAATGAAGCTATAAACGGCGAAGCGAAAAAGGCAAACGGTTTTGAGACAATTTTGCAAGAAAACCAACCCAAGATGAACGGAgtgaaaaattatgaaaatggcCACAGTAGTGAAGAAAATCCTACATTTGAAAATGGATTTGATGCGCGACGGGATTCTCATGTGGAACAAAATCCATCTATCGTGGGAATACTTGGCGGTCAACAAAATCATGCCGAACAGCGACTGGCGGCGCGTCGAGCGGCGCGGGCCGAGGCGCGAGAGATACGCATGCGCGAGCTAGAGCGGCAACAACGCGAGCAGGAGGACCATGCGGACAAGGCGTACGACATGTATGCAGAGACGGTGGGCCGCCGCGGGGGCTCCCGGCTGGCGGCGCTGTCCCCGGGCGTGCACTCGCCGCGACGCAGCTCCGAGGACTCCGTCGACGACACGTTTAGCATCAAAGACCTTAGGCACGAACTCAAAGAGGTGGAAGAGAAGTTCCGCAAGGCGATGATCCTGAACGCTCAGCTGGACAACGACAAGGCTGCGCTGGGGTACCAGCTGGAACTGCTCAAAGACAGGATAGAGGAGCTGCACGAGGAGTATGCTCAGTTACAGCGCGAGCACAAAGAGAAATGCTCAGCACACGAGCGTTTAAAACGCGAGCACGCGTCTCTCGAGCGCGAACTGCACAGCGCTCGGGACGCCGTGCGCGCGCGCGAGCTCGCCGCGCAGCACGCGGGCTTCGCGTTCGTGGACGCGGAGGGCGGCGGGGGAGCGGGGGGCGGTGCGGGGGGAGCGGGGGACGGGGGgcccgcgctcgcgctcgtctcGCACCAATCCGAGCAGCTGCTCAATGACGCGGGGGAGGGGACGCTTGACGTGCGGTTGCAAAAGTTACTAAGTTCGAAGCAATCCCTGGAGTCTGAAGTGCGCAAACTGAAACTGCAACTCAACGAGGAGCGCGCGGCGAGACAAAATGGCGTCGCCAATCACCACGACGCGGAATATGAAAACGAAATGGAGACGCTCCGTAAATGCGTGTCGGAGGCGaaggcgcgggcggcgcgcgcggagGCCGAGGCGGCGCTGCAGGCCGCCGGCGCCGCGCGGCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGGCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGGCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGGCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGTGAGGGGACACCTACTGCAGCATTACCTTCTCCTCGAGGCGCAGCTGGCGCGGCTGCGGGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGCGAGGGAGGCTCTGAATCGTGTCGAAGAGTTGGAGACGGAGAACAGCCACTTGACCAAGAGGCTGGACAAGTTGAAGAACGCCAAATCCGCGCTGCTGAAGGACCTGTGA
Protein Sequence: MMGKVSKLETPGNSDEESGDAFTDGDFEDSDDETVVERNGNVEPAHMPVNEAINGEAKKANGFETILQENQPKMNGVKNYENGHSSEENPTFENGFDARRDSHVEQNPSIVGILGGQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGSRLAALSPGVHSPRRSSEDSVDDTFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSAHERLKREHASLERELHSARDAVRARELAAQHAGFAFVDAEGGGGAGGGAGGAGDGGPALALVSHQSEQLLNDAGEGTLDVRLQKLLSSKQSLESEVRKLKLQLNEERAARQNGVANHHDAEYENEMETLRKCVSEAKARAARAEAEAALQAAGAARLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRGHLLQHYLLLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -