Atra006713.1
Basic Information
- Insect
- Amyelois transitella
- Gene Symbol
- Rel
- Assembly
- GCA_032362555.1
- Location
- CM063556.1:8138558-8159799[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-35 8e-32 111.1 0.0 1 168 50 216 50 217 0.89 2 2 3.1 1.7e+04 -3.8 0.3 102 141 527 565 525 582 0.66
Sequence Information
- Coding Sequence
- ATGTCTTCTAGTGGTCAGGATTTTGAGACATCTAGTGTAGATTCTCCGCAGCCCTACGATTCTCCATATAGCTCTCCATCTCAACAAGTACCGCAATTGGCGTTTACATTAACTACTCTTAAAATGAATACTGcaAATCGCCCTTTCCTCCGGATTGTTGAACAGCCTCAAGATCATTTCCGTTTCCGGTACAAGAGCGAAATGGTGGGAACGCATGGGTGCTTGCTTGGCAAGTCGAATCCCACGTCACGTAATAAAACTCACCCCACAGTTGAGTTGGTGAACTACCCTGGAAGAGCCACAATCAGGTGTCGCTTGGCACAGGACAAAAACCCTGGGGAGCATCCTCATAGGCTGTTGGAGGACGACCAAGACCGTGACGTCAGCTATGAGGTGCCCGAACAAGGGAGCTACAAAGTCGGgTTTGGCGGCATGGGCATTATACACACCGCCAAGAAAGAGGTGCCAATGTTGCTATacaacaaatataaacttaacagTCAAATGTCTCCTAAGGAGctCCTAGCGCGCTGTGACAGTGAAGCGAAGAAAATCAACCTGAACATAGTCCGGCTGCGATTCAGCGCCCATGACATCAACACGGGCGAGGAAATCTGCGAGCCAGTGTTTTCTGATCCTATACACAACATGAaaagcgCATCAACGAATGACTTGAAGATATGCCGCATCAGTAAAACCAGTGGACGAGCACGCGGCGGCGACGACATCTTTATATTCGTTGAGAAAGTGAATAAAAAAAATATAAAGATCCGATTTTTCGAATTGGATGCAAACGGAGTGGAGGTGTGGCAAGCATATGCTCACTTCCTGGAGAGCGATGTGCACCACCAATATGCAATAGCTTTCAGCACACCGCAATACCACGACCCATACGTACCCAATAACGTGAAAGTGTACTTCGAACTGCAACGTCCACAAGATGGCCGCACCAGTGATCCAAAAGAGTTCACGTATATTGCCGACGAAACTAGCAAGATGCGAAGTAAGAAACGGAGAATAAATTCTACGTATTCCTCGTTAAGTTCCAACAgtagtTCCCTGAAGAGTGGCGACATCGTTCCAGCAACGGTTATGCTTcagGCTTGTAATGGTGCCTACGACGGTATACAAGACGTCGATATGACAGCTCTCACTAATATACAGTCGataCCGCAAATTCCTATCGGCTCCCACTCGCCTCACAGCGACCTAGGTGACGCTTTGCTTATCAACATGGCAGCGACTCCTAGCCCTTCTGAGAGCCACTTGTACGAAAACAACCCAGTACTTACACAATGCAACCTCAAAGAGACTAATAACCAATTCAGCACCGGACTGCCGGATTTCAACTCCACGGAGCTCAGAAATCTGTTGGAACACAATTCGGATATGACAGCGGAAGAGAAGAAACAATTTGCGGAAGCTAATTGGTCAcCTTATTTAGAATCGTACACCAGTTTTCCGGACGAGaacaaCAGTATGTTTTATATAAGGTCTCTGCTGGTGTCAGATTCGGGAGTCAAAAAAGGTGGCGTGACAAAGGATAACAAAACACATGGCTCACCCCCAGCAAAGATTAAAGATGAAGATGTCAAATTGAACATCGTCGATAAAACGAAAATTCAAGAAAAGCCATACTACAAAGCGGAAGACGGTCTAGAAGTTAAAAAGTTGGTTGTCGAATTGGTGGAGTTGATGAGGAAAACTCCGCTTGACAAGAATGTCATCCGCAACAAATTGGAGCGGCTCGTGGAGAAGCGGCTGTCTAATGGAGATACATTCCTACACATGTCCCTCAACAGTAACCGGCCGAGTTTCGAATACATCGTCAAAATGGCGCATCACCTCGGCATGACGCATTTGCTCAACTTGCAAAATAACCGATTGCAGAGTATACTGCACCTCGCGATCGTCGCCGAAGCGCCGTCTCTTGTCGGCCTCCTCGTCAGCAAAGGTTGCGACCCGATGTTGGGTGATGAAGAGGGGAACAACGCGGTGCATTACGCTGTTATGTGCCGTGAAGACGCCTCTTGTCTCGACTCGTTGCTCAAAGCCATTGTCAAGAACAGCGTACACCACGATTTGAACGCCACCAACAATGaaaaGCAAACGGCCCTCCACCTGGCGGTTGCATACAAATCCGTGTCAAAGACTCGTTTACTTCTGAAGCACGGCGCTCGCACGCAGGTCACCGATGGCGAGGCCCGCACCCCGCTACACGTCGCCGCTAAAATGAATTACGCGCTTATTGTCAAGGAACTGTTGGAGTTTATCTCTACGTCTGAAATAGACGCTGTAGACGGGCGTGGTTACACGGCCCTACAGATACTGTGTGACGGCAGCGTACAGGAACACACGGTCGAAATGGTCAGGATGCTGCTCGAGAAAAAGGCGGATCCTCGAGCCCACGGCCACCAATCGGCGTGGCACCTGTCCAAGGACAAGCCCGCGCTCCGCGACGTGCTGCGGCGACACGCGGCCGACGTCGCGGACGACGACGTCAAGTCCGAGCCCGACGACGACATCAAATCGGAGCCCGAAGACGATACGGATGATGAGTTCGTCGAAGCGGAGATGTGCTTGCCAGAACTATCGTCGTACATATCAGAGTTATCTGCGTGTTTAGACGCCAACGGCGGTTGGCGGCCTTTGGCAACTAGACTCTCCCTGGACACTATGTGTTCCTGGTATCAGAACACGCACAGCCCTACAAAGACACTGCTTAACTTCCTAAAGcAAAGCGACAGTGACGTCTCTTCAAAGTGCCTCGCTGTGATGTTAGAAGCGTTAGGACAACCTGAAGCAGCTGCCATTATACGCAAATATATAGATTAG
- Protein Sequence
- MSSSGQDFETSSVDSPQPYDSPYSSPSQQVPQLAFTLTTLKMNTANRPFLRIVEQPQDHFRFRYKSEMVGTHGCLLGKSNPTSRNKTHPTVELVNYPGRATIRCRLAQDKNPGEHPHRLLEDDQDRDVSYEVPEQGSYKVGFGGMGIIHTAKKEVPMLLYNKYKLNSQMSPKELLARCDSEAKKINLNIVRLRFSAHDINTGEEICEPVFSDPIHNMKSASTNDLKICRISKTSGRARGGDDIFIFVEKVNKKNIKIRFFELDANGVEVWQAYAHFLESDVHHQYAIAFSTPQYHDPYVPNNVKVYFELQRPQDGRTSDPKEFTYIADETSKMRSKKRRINSTYSSLSSNSSSLKSGDIVPATVMLQACNGAYDGIQDVDMTALTNIQSIPQIPIGSHSPHSDLGDALLINMAATPSPSESHLYENNPVLTQCNLKETNNQFSTGLPDFNSTELRNLLEHNSDMTAEEKKQFAEANWSPYLESYTSFPDENNSMFYIRSLLVSDSGVKKGGVTKDNKTHGSPPAKIKDEDVKLNIVDKTKIQEKPYYKAEDGLEVKKLVVELVELMRKTPLDKNVIRNKLERLVEKRLSNGDTFLHMSLNSNRPSFEYIVKMAHHLGMTHLLNLQNNRLQSILHLAIVAEAPSLVGLLVSKGCDPMLGDEEGNNAVHYAVMCREDASCLDSLLKAIVKNSVHHDLNATNNEKQTALHLAVAYKSVSKTRLLLKHGARTQVTDGEARTPLHVAAKMNYALIVKELLEFISTSEIDAVDGRGYTALQILCDGSVQEHTVEMVRMLLEKKADPRAHGHQSAWHLSKDKPALRDVLRRHAADVADDDVKSEPDDDIKSEPEDDTDDEFVEAEMCLPELSSYISELSACLDANGGWRPLATRLSLDTMCSWYQNTHSPTKTLLNFLKQSDSDVSSKCLAVMLEALGQPEAAAIIRKYID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -