g399.t1
Basic Information
- Insect
- Amphipyra tragopoginis
- Gene Symbol
- DMRT2
- Assembly
- GCA_905220435.1
- Location
- HG991992.1:9829124-9834774[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-26 6.7e-23 79.3 11.4 1 47 20 66 20 66 0.99
Sequence Information
- Coding Sequence
- ATGCAAAACGAAGGTGTTGGTGAGAGTGAAGGCACTGGCACCAGCCGGAAGGCGCTGCGGACACCGAAGTGCGCTCGTTGTCGCAACCATGGAGTGATCTCGTGCCTGAAGGGACACAAGAGGCTATGTCGCTGGCGGGACTGTCGCTGCCCTGGTTGTCTGCTGGTCCTCGAGCGTCAGCGCGTTATGGCTGCACAGGTGGCACTGCGCAGGCAGCAGGGCGCGGGCAACTCAGACGCACGAGACGGTGAAGCGGCGGCGCTGGCGGCTCGCAAACGCGCCTACCGCGCCCGGCTGCGCTGCATGCAGATGTCCAGGACATTCCCAGTACAACCACCTATCTATGGTAATGAACGGCTATTTTCAAGTGATCCAGCGTGGAACGAGCGTGTGCGCCGGCGTCGAGCTTTTGCAGACGTGGAGTTAGAGCGCGGCCCGGCGCCACTGCCAGCGCCGCCGGCTGCACCACCCGCTGCGCTTCTTTGCAGGAACCTTCTCGCAGCATTACTCACTACTTACGCGCCCATGCCCCAACACAATCAGCCACAACGACAAAAACTGTCATTTTCCATTGAATCCATTATAGGAGTCCAGTAG
- Protein Sequence
- MQNEGVGESEGTGTSRKALRTPKCARCRNHGVISCLKGHKRLCRWRDCRCPGCLLVLERQRVMAAQVALRRQQGAGNSDARDGEAAALAARKRAYRARLRCMQMSRTFPVQPPIYGNERLFSSDPAWNERVRRRRAFADVELERGPAPLPAPPAAPPAALLCRNLLAALLTTYAPMPQHNQPQRQKLSFSIESIIGVQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00049953;
- 90% Identity
- iTF_00383707; iTF_01342267; iTF_01062851; iTF_00124321; iTF_00040866; iTF_00123427; iTF_01063811; iTF_00809188; iTF_00810117; iTF_01085285; iTF_00375270; iTF_00037865; iTF_00301225; iTF_00726409; iTF_00758217; iTF_01094089; iTF_00831274; iTF_01533098; iTF_00711915; iTF_00850795; iTF_00274476; iTF_00851852; iTF_00364077; iTF_00951885; iTF_01527277; iTF_00120558; iTF_00446191; iTF_00445232; iTF_00147505; iTF_00273649; iTF_00302161; iTF_00928754; iTF_00685491; iTF_00745747; iTF_01061939; iTF_00071476; iTF_00121492; iTF_00907093; iTF_01094965; iTF_00952758; iTF_01526070; iTF_00374168; iTF_01338808; iTF_00042681; iTF_00177177; iTF_00447193; iTF_01247033; iTF_01118362; iTF_00906203; iTF_01084315; iTF_00924732; iTF_01093148; iTF_00237629; iTF_00622877; iTF_00425438; iTF_01533983; iTF_01532064; iTF_00049953; iTF_00111716; iTF_01119383; iTF_00043551; iTF_01029318; iTF_01030287; iTF_01028344; iTF_01031194; iTF_00771976; iTF_01230632; iTF_01064713; iTF_00973834; iTF_00122446; iTF_01027375; iTF_01192762; iTF_00173009; iTF_01340163; iTF_01439985; iTF_01441144; iTF_01425111; iTF_00171803;
- 80% Identity
- -