Basic Information

Insect: Amphipyra tragopoginis
Gene Symbol: -
Assembly: GCA_905220435.1
Location: HG992019.1:14507831-14509795[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.5e-08 1.4e-05 23.7 0.0 3 36 17 50 15 57 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.5e-08	1.4e-05	23.7	0.0	3	36	17	50	15	57	0.92

Sequence Information

Coding Sequence: ATGCCTCGTAACTATTCTAGAAAAACAGACCGACAGGGATGGGATAAAACCTCCATGGAAAAGGCTATTGAAGCTGTGAAGAATAATGAAATGGGCTGGCTATTGGCTTCTAAAGTATTTAATGTCCCACAGTCGACTCTTAGAAGACATgcactgaaacaaaataaattcttaGCTCCAACTACTAAAGGTATGGGTAGGTACAGGAGTGTCTTCACATATGAAATGGAACGACAACTGGTAGAACATATTAAATTACTAGAAACGAGATTGTTTGGATTCACAAGGAAGGAAGTTTTGGAATTGGCCTACCAGTTTGCGGACGTTAATAATATTCCTCATAACTTCAACAATGAAAAAAAGATGGCAGGCAAAGAATGGTTGGCTGGATTTCGACGCAGACACCCAGACATATCCTTGAGGAAACCTGAAGCGACTTCAGCTGCAAGAGCCCAAGCCTTTAACAAACCGCAAGTAGCACTATTTTTCAACACTTACCAAGACATTGTTCAGAGCAACAACATTTCTCCTCATAGGCTCTACAATGTCGATGAGTCAGCTTTATCAACAGTCCAGAGACCCCAAAAGGTCTTTGCTACTACTGGGCGTAAGCAGGTTGGGGCTTTGACTAGTGCTGAAAAGGGGTCTCATGTGACAGTTGTTTGTTGCATGAGTGCAAATGGCCATTTTGTCCCGCCGTGTTTAATTTATCCTAGAAAAATCATGAAACAGGAGTTGATAGACGAAGCTCCAACCGGTACTTTGGGTATTGCCCAGGAATCAGGTTGGATGACAACAGCTGTATTTTATAAATGGTTGGTGCACTTTCAGTTGCATGTAAAAGCGAGTCTTGATGATAAAGTGCTTTTGGTAGTTGATGGACATATAAGTCATAAAGGTATTGAAAGCTTAAAATTCGCAAAAGAGCATGGAATCATTATGGTATGCTTCCCACCTCACTGCACGCACCGCATGCAACCATTAGACGTATCTTTCTATGGGCCACTGAAGACATATTTTAATCAAGAAGTGAGCACTTGGTTAAAGAACCATCCAGGCAGAGTTGTTACTCATTTCCAAATAGGTGCAATTCTCAACAAAGCTTATGGCAAAGCAGCAACGATTCAAACTGCCGTCAATGGGTTTCAAAAAACAGGTCTCTGGCCTGTTGATCCAAACATATTTCCAGATTATTTGTTTGAGCCTGCTGAGACGACAAACATCCCCATGCAAAAAGATCGGGTAGAGCCCGAAGAAGATTCAACGGCAGCAGAAAACCTATGCATACCGTCATCAGGTCCATCTCAGGTAGAAGCAGGCGGTTCGACATCACTGATAATTGCAAGCACATCAGCCGCAGACAACCCACTTCCAATCTCAGTTGCCCGATCTAGAGACACAGCTACTGCAATACCTACGACACCCACATCATCTAAATTGATACTCCAAGATATGAATATCAATGTTCCAGTCAGCGTGCTGTCTCCAGTGCCGATAGGAACATATGTGGCTGGACAAGgcaaaagaaaaccacgcaagAAACCAACAATATTGGTGTTAACTTCAACGCCAAATATAGAAGAGGCAAAAGCAAAATCAGCTCCTCCACCTGTTCCAAAGAAAAACACGAGAAAGGTTACGAAAGCTTTGGATTTTAGTTCCGACAGTGAAAATGATTTCTCTTCCTTACAAGCTTTCACTGAAGTcggagatgatgatgaagattgTCCTTGCATTTATTGCAATGACCTCTACTCCAGGTCCAAGCCAAAGGAGGTCTGGTTAATGTGCTTGAGCTGTAAAAGATGGGCTCATGCATCATGTGCAGATGTTCCGAAAAATACAAAGCGTTTTACGTGTGAACTCTGTCTCTAA
Protein Sequence: MPRNYSRKTDRQGWDKTSMEKAIEAVKNNEMGWLLASKVFNVPQSTLRRHALKQNKFLAPTTKGMGRYRSVFTYEMERQLVEHIKLLETRLFGFTRKEVLELAYQFADVNNIPHNFNNEKKMAGKEWLAGFRRRHPDISLRKPEATSAARAQAFNKPQVALFFNTYQDIVQSNNISPHRLYNVDESALSTVQRPQKVFATTGRKQVGALTSAEKGSHVTVVCCMSANGHFVPPCLIYPRKIMKQELIDEAPTGTLGIAQESGWMTTAVFYKWLVHFQLHVKASLDDKVLLVVDGHISHKGIESLKFAKEHGIIMVCFPPHCTHRMQPLDVSFYGPLKTYFNQEVSTWLKNHPGRVVTHFQIGAILNKAYGKAATIQTAVNGFQKTGLWPVDPNIFPDYLFEPAETTNIPMQKDRVEPEEDSTAAENLCIPSSGPSQVEAGGSTSLIIASTSAADNPLPISVARSRDTATAIPTTPTSSKLILQDMNINVPVSVLSPVPIGTYVAGQGKRKPRKKPTILVLTSTPNIEEAKAKSAPPPVPKKNTRKVTKALDFSSDSENDFSSLQAFTEVGDDDEDCPCIYCNDLYSRSKPKEVWLMCLSCKRWAHASCADVPKNTKRFTCELCL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01155088;
90% Identity: iTF_00445093; iTF_00290631; iTF_00290633; iTF_00290634; iTF_00290635; iTF_00290636; iTF_01031084; iTF_01031085; iTF_01031086; iTF_01361556; iTF_01361557; iTF_00122327; iTF_01064600; iTF_01064601; iTF_01064602; iTF_01024870; iTF_01024869; iTF_01024871; iTF_01024872; iTF_01024873; iTF_00290632; iTF_01158894; iTF_01158896; iTF_01158897; iTF_01264539; iTF_01026108; iTF_01024868; iTF_01024867; iTF_01430751; iTF_01430750;
80% Identity: -