g2761.t1
Basic Information
- Insect
- Amphipyra tragopoginis
- Gene Symbol
- -
- Assembly
- GCA_905220435.1
- Location
- HG991998.1:17457526-17459874[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-15 4.2e-12 44.6 0.2 1 40 13 52 13 56 0.94
Sequence Information
- Coding Sequence
- ATGGAGCCAGCAAATAAAAAACCACGTGGAGAGTGGACAGAAACTCAATTAAAGAAAGCTCTTCAAGCAGTAAATAGCAGACAAATGTCTCAAAGAAAAGCAGCTACAGAATATAGCATACCAAGGCGTACATTAAGAAAccatttaaaatcaaaatccgcaGAAAAGATAACTGGTCGTGCcccgattcttaacaaaataCAGGAGAAGAGTTTATGCAAAAGGGTGATTAGACTTGCTCAAATAGGTATGCCATTGACCCCGAAACTTGTTCGTAAGCAAGCTTATGAATTCTGTTCAGCAAATGATATCCCGAATAGTTTTAATGAAAAGAAGAACATTGCTGGAAAAAAATGGCTAAAATGTTTTGTCAACCGCAATCCAGAAATATCTCTTCGTAGGGCTCAATTAATGAATCCGGCAAGAGCACAGAAATTAAATAAGCCCATTGTGCTGAAACATTTTgaaagtataataaaaatatatgacgAAATGAATATCTGTAGTCACCCGGAGCGTTTATATAACATGGATGAAAAGGGATGTAGACTTACACTGCACCATCAACAGAAAGTCTTTGCTGCAAAAGGAACTAAAAGAGTGCACCTTGTCGGTCAAGAACATGCGGAAAATGTCACAATAGCAATGTGTGTAAATGCAACTGGAAATAGTGTACCTCCAATGATCTTATTCAAGGGCAAAAGGTTGAGACCTGAATTTAGTGAAAATTTGCCACCTGGCAGCTTCGTAAAGATGGCCCCGAAGGGAAGTATGACGACTGAGCTTTTTGTCGACTTTATACAGCACCTGGGACGGTATAAATCACCAGAAAAATGTTTACTCATTTTTGATGGGGCTTCTTCTCATTTAGACGCTAGAATTGTTGATGCTGCAGACGCTCATAACATTGTGCTGTATTGCTTACCATCTAATACCACCCATGAACTGCAACCGCTTGATAAGTCTGTAAATAGATCTTATGAGCAGTTTTGGGACGAAGAAGTCTTACTGTATGCTTATCAAAATCCAGATCGTAAGATTACAAAATCGCGTTTTAACAAAATCTTTACGAAGGTTTGGTCCAAGTGCATGACCACAGGAAACATAATCAGTGGGTTTAGAGCAACTGGTCTCTTTCCGTATGATCCTAATGCGATTCCTGTAGAAGCGTACGCGCCTTCAATACTTACGCAACTGCCCAATCCACATGATTCACTTCAAAATGTTTCCAGAATGCAAGACTCAACTTGTGATGTGGCAGCTCCTCAAGTTTCTAACTTAAGTTCTGTTATATCCCCAACACGTGTCAACTGCTTTGATTCAGATGTCACAGATTGTGAAGAAAATCTTGACAATTTTTCACCATCTATTCTAACTCAGAATGAATTTAGTGAATTAAGGGAATATGACGTCGTTGAACAAAGAAATGTAACAGCAAATCCACAATGTCCATCTAATATTAGAAAGTTAGTCAATTATAGTTCCTCttccgaattttccgatttgAATGATTCGGAAATCCAAAAACAGCTTCAGGAGCAACCTTTTCTGGACAATAATTATAGAAACACTGAATTTTATTCACCTGTTCCTACGACTTCTGGAATCAATATGCAGCCTCGCCCGCGATTAAATTCTTTTACTTCAGATAGCTCCAATGCAGAAGACTTGGACACTTGCTTAAAACGTTTCCAATGTCTTCCAAAACCTTCaaaatttattgatatttatagTTCATCTTCAGAGTCAGATGAAGAAAATTTTAACCCGAACTGCAGAGAAGTTATACCACTCTCTGAGCAAAACCAGGTTCAGTTCGAGGAATCTGAAGATGATTTACCATTAGCAAAATATAAAGAAGATGCTGGTACTTCAGCCTCTAAGTCACCATTCCACAAACAAATTCCAACACCAAATTTtgcaacaattaaaaataaaccgcGACGGAAAGCGTTGAATTACATAGGCCAGAAAATTACCAAAGATTTGTTTGATGCTGTTAAAGATAAGGcgaagaaaaacacaaaaaaagaactgaTTAATAAACCAACTAGAGGTGAAAGAAGGCTAAGTGacacaaataaaagtaaaagatCTAGGCAAAATAAGGAAAAAGTTAAAAGGTTATTGAAGAAAAGTCGAAACACAGAGAGTAGTAAACTTGAACAAATAAGTAAGAAGGActctaaaaaatctaaaaaagcCAATGATTGGTATTGTCACGGATGCGAGAAAGACAGAATTGCTGACATGCGTCTATGTATCACCTGCCAGAACTGGTATCACGAAGAATGTGTTGGCTTAACAACGGAGGACGAGGAAAAATTTGTGTGTCCCAAATGTAACTGA
- Protein Sequence
- MEPANKKPRGEWTETQLKKALQAVNSRQMSQRKAATEYSIPRRTLRNHLKSKSAEKITGRAPILNKIQEKSLCKRVIRLAQIGMPLTPKLVRKQAYEFCSANDIPNSFNEKKNIAGKKWLKCFVNRNPEISLRRAQLMNPARAQKLNKPIVLKHFESIIKIYDEMNICSHPERLYNMDEKGCRLTLHHQQKVFAAKGTKRVHLVGQEHAENVTIAMCVNATGNSVPPMILFKGKRLRPEFSENLPPGSFVKMAPKGSMTTELFVDFIQHLGRYKSPEKCLLIFDGASSHLDARIVDAADAHNIVLYCLPSNTTHELQPLDKSVNRSYEQFWDEEVLLYAYQNPDRKITKSRFNKIFTKVWSKCMTTGNIISGFRATGLFPYDPNAIPVEAYAPSILTQLPNPHDSLQNVSRMQDSTCDVAAPQVSNLSSVISPTRVNCFDSDVTDCEENLDNFSPSILTQNEFSELREYDVVEQRNVTANPQCPSNIRKLVNYSSSSEFSDLNDSEIQKQLQEQPFLDNNYRNTEFYSPVPTTSGINMQPRPRLNSFTSDSSNAEDLDTCLKRFQCLPKPSKFIDIYSSSSESDEENFNPNCREVIPLSEQNQVQFEESEDDLPLAKYKEDAGTSASKSPFHKQIPTPNFATIKNKPRRKALNYIGQKITKDLFDAVKDKAKKNTKKELINKPTRGERRLSDTNKSKRSRQNKEKVKRLLKKSRNTESSKLEQISKKDSKKSKKANDWYCHGCEKDRIADMRLCITCQNWYHEECVGLTTEDEEKFVCPKCN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00037699;
- 90% Identity
- -
- 80% Identity
- -