Basic Information

Insect: Amphipoea oculea
Gene Symbol: -
Assembly: GCA_945859585.1
Location: CAMAOF010000058.1:1690967-1702218[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.13 11 7.1 1.9 1 23 190 213 190 213 0.91

2 10 0.32 26 5.9 3.8 1 23 233 255 233 255 0.97

3 10 0.1 8.4 7.4 0.1 2 23 266 287 265 287 0.95

4 10 0.05 4 8.4 0.1 2 23 293 315 292 315 0.96

5 10 5.3e-06 0.00043 20.9 1.7 1 23 321 343 321 343 0.98

6 10 0.00051 0.041 14.7 0.1 1 23 349 372 349 372 0.95

7 10 0.001 0.081 13.8 3.6 1 23 381 403 381 403 0.99

8 10 0.00072 0.058 14.2 1.8 3 23 413 433 412 433 0.98

9 10 6.7e-06 0.00054 20.6 1.8 1 23 439 461 439 461 0.98

10 10 0.00077 0.062 14.1 5.9 1 21 467 487 467 490 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.13	11	7.1	1.9	1	23	190	213	190	213	0.91
2	10	0.32	26	5.9	3.8	1	23	233	255	233	255	0.97
3	10	0.1	8.4	7.4	0.1	2	23	266	287	265	287	0.95
4	10	0.05	4	8.4	0.1	2	23	293	315	292	315	0.96
5	10	5.3e-06	0.00043	20.9	1.7	1	23	321	343	321	343	0.98
6	10	0.00051	0.041	14.7	0.1	1	23	349	372	349	372	0.95
7	10	0.001	0.081	13.8	3.6	1	23	381	403	381	403	0.99
8	10	0.00072	0.058	14.2	1.8	3	23	413	433	412	433	0.98
9	10	6.7e-06	0.00054	20.6	1.8	1	23	439	461	439	461	0.98
10	10	0.00077	0.062	14.1	5.9	1	21	467	487	467	490	0.94

Sequence Information

Coding Sequence: ATGGAGAAAATATGCAGATTTTGTTTGAAAGTATCTGATAAAAACATGTGCAGTTTGCAAGAATGCGATATACTCTATAGCATTCAAAAATTTCTAACGATAAATATACCAACTGAAGATTCCTTCCCGAGCAATTTATGCAAGGAATGCTTTAAAAAAATATCGCAAATTATTAAATTCTGTATAACTGTCAAAGACAATGAAGATAAATTACAATATTATTCAAGAATAGGCCTATTACAAGATTATTATTCAAAAATTATAAATATACCGCAAATTAAAGATGAACAAGAAGAGATTAAAATTGAAACACAATATCTTGTGAAAGTTGAAGATAATACAAATATTGGGGATTATGATCATTTAAAAAATTATGAACTGTCTGATGATGTTAACGAGACCCATTGCAGTTCTGATGATGAAATAACGCTGTCCTCAATCAAGAATGAAAATGAACTAAATCCCACTGCTCCATTAAAAAATATTACAAAATTTAGACCTATAAAGAGTCTCATTCCTAAAAGGAGAAAGCTAAAAGAACCAGAAAACGTTGAATACGTAAAACCATTTACTTGTCTGACATGTTTAATAGAATGTAATTCTCAAGCAGACCTCACTAAACATTACTATGCCAAACACCTCAAGAAGAAAACTGATAAAAATTATACGGAACATAAATCGAAGGACAAGACTACGTACAGCTGCAACAGTTGTGAGAAAACATGTGATTTGAAGAAAGATATTTTAAAACATAGTAAGAGTCATACTGATGACAATAAAGATGAGAGGCCGTTGATTTGTAAGCTTTGTGCTAGAACATACCGGAGAGTTCCTGACATAGTTCGCCACGCTAGAGCCCACAGCGGCTTCAAACTGCAGTGCCCATACAACTGTGGGTACACCAGTGCTTACGCAGGCGCTATGAAAGAACATAAGAGTAGACATTTGGATGAATATAAGTATACCTGTAAGACGTGCGGCAAGGGTTTCAACACGAAGACCTGGTATGAGCAACACCAGAACCTCCACACCGGACAGAAGCCGTTCGTCTGCAACATATGTGGCGTCGCCTTCCCTCTGGCCAGATATCTACAAACTCACAAGAGCTCGTTGCATCCGCAATCGTCAAGCTTGAAACGGTACCAATGTGTCCATTGTGACGAAAAGTGCGACAGTTCCAAAAGTCTTGCTTTACATTTGCAGAAACATGGTATAAACAAAGAAACTTATTCTCTTTGCGACTTTTGTGGCAAGATTGTTACATCTACATATCAACTGCAGTACCATCATAGGATGCACTTGGGAGTGAAGCCATACTCATGCACTATATGCAAAAAGAAGTTTGCGAAAAAGTACAACGTGCAACTTCACATGAGTATCCATACCGGTGATAAGTCGCACGTTTGCGTTCATTGCGGCAAGCAGTACTCGCAGCGGAGCACTCTGCTGAGACATCTCAAATGCTACCACGGCGGCGCCGGCGACACGTCAACATAG
Protein Sequence: MEKICRFCLKVSDKNMCSLQECDILYSIQKFLTINIPTEDSFPSNLCKECFKKISQIIKFCITVKDNEDKLQYYSRIGLLQDYYSKIINIPQIKDEQEEIKIETQYLVKVEDNTNIGDYDHLKNYELSDDVNETHCSSDDEITLSSIKNENELNPTAPLKNITKFRPIKSLIPKRRKLKEPENVEYVKPFTCLTCLIECNSQADLTKHYYAKHLKKKTDKNYTEHKSKDKTTYSCNSCEKTCDLKKDILKHSKSHTDDNKDERPLICKLCARTYRRVPDIVRHARAHSGFKLQCPYNCGYTSAYAGAMKEHKSRHLDEYKYTCKTCGKGFNTKTWYEQHQNLHTGQKPFVCNICGVAFPLARYLQTHKSSLHPQSSSLKRYQCVHCDEKCDSSKSLALHLQKHGINKETYSLCDFCGKIVTSTYQLQYHHRMHLGVKPYSCTICKKKFAKKYNVQLHMSIHTGDKSHVCVHCGKQYSQRSTLLRHLKCYHGGAGDTST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00758605;
90% Identity: iTF_00925166; iTF_01095313; iTF_01094384; iTF_01093499; iTF_00746136; iTF_00758605;
80% Identity: -