Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: -
Assembly: GCA_963170755.1
Location: OY720677.1:136969790-136983188[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.1 1e+03 3.7 0.0 2 23 298 320 297 320 0.88

2 15 0.26 85 7.0 2.6 1 23 375 398 375 398 0.97

3 15 2.9 9.4e+02 3.8 0.7 2 21 405 424 404 425 0.91

4 15 6 2e+03 2.7 0.3 1 23 493 517 493 517 0.89

5 15 0.00017 0.056 17.1 4.1 1 23 520 543 520 543 0.96

6 15 0.031 10 10.0 3.8 2 23 550 572 549 572 0.94

7 15 0.02 6.7 10.5 4.0 1 21 676 696 676 697 0.95

8 15 0.0015 0.48 14.1 1.5 2 23 709 731 708 731 0.94

9 15 0.0087 2.9 11.7 1.4 1 23 734 757 734 757 0.95

10 15 5.9 1.9e+03 2.8 2.2 3 23 760 783 759 783 0.91

11 15 5.7 1.9e+03 2.8 0.2 1 23 787 810 787 810 0.93

12 15 0.8 2.6e+02 5.5 0.4 2 23 817 839 816 839 0.94

13 15 0.11 36 8.2 1.0 2 23 848 870 847 870 0.95

14 15 0.019 6.4 10.6 0.2 2 23 876 898 875 898 0.94

15 15 1.2 4.1e+02 4.9 0.3 2 23 1076 1098 1075 1098 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.1	1e+03	3.7	0.0	2	23	298	320	297	320	0.88
2	15	0.26	85	7.0	2.6	1	23	375	398	375	398	0.97
3	15	2.9	9.4e+02	3.8	0.7	2	21	405	424	404	425	0.91
4	15	6	2e+03	2.7	0.3	1	23	493	517	493	517	0.89
5	15	0.00017	0.056	17.1	4.1	1	23	520	543	520	543	0.96
6	15	0.031	10	10.0	3.8	2	23	550	572	549	572	0.94
7	15	0.02	6.7	10.5	4.0	1	21	676	696	676	697	0.95
8	15	0.0015	0.48	14.1	1.5	2	23	709	731	708	731	0.94
9	15	0.0087	2.9	11.7	1.4	1	23	734	757	734	757	0.95
10	15	5.9	1.9e+03	2.8	2.2	3	23	760	783	759	783	0.91
11	15	5.7	1.9e+03	2.8	0.2	1	23	787	810	787	810	0.93
12	15	0.8	2.6e+02	5.5	0.4	2	23	817	839	816	839	0.94
13	15	0.11	36	8.2	1.0	2	23	848	870	847	870	0.95
14	15	0.019	6.4	10.6	0.2	2	23	876	898	875	898	0.94
15	15	1.2	4.1e+02	4.9	0.3	2	23	1076	1098	1075	1098	0.93

Sequence Information

Coding Sequence: ATGGAAACAAAATTGTGCAGAATATGCGGAAAGTCTACCGATAATCACTTAAACATTTTCAAAACAGAAGGGCTGAAAATAAAATTGGAGACTTGTCTTCCAATTATTGTTTCACAACATTGTCTTCTGCCTGAAACAATATGCAAAGAGTGTGTTGAGAATGTGGAgaatttctataattttattaaaaattgtttacaaaatttaattattttagagTCACAGTATGATATTCATGAGTCTTGTTTAAAGAGTAAGCGAAAGTTTGAAAAAGGAACAGCTGCAGATACAGTTACAAAGACTGAAAAAAGTATTCAAACTGATGAAATTAGCTTTTTAAGATCATACAGAGAGTCTATAGATTTTCCAAAGACATTAGAAGAAGCAGAAGAGACATTAAATGATAATGATTATTTAAGATTTCTTCCAAAATCTGaaatcaaagaaataaaattggttAATTATGATATATCGGATGAATCAAATTCAGAAACTGAAGATCAAACTGTGAGTAGTATAGTAGTTCTTACCAACAATAGGCAAGATAAAAATTCAGAATCCTTAAACTTAAACAATTTTCTGGTACACAAACAGTATTTTGACAATCAAGagaataaattagtaaatgaAATTACCCAAAGAATAACTCAGAAAAGAAAATGTGATGAAATATTGCCTTATCAAACCAAAATATGCAAATTTGACATCAGTAGTCGAAGAAAAAATAGACAGCCTAAGAAAATCAGTAATAAAAGTATAGAAGATGTacctatttttaataaatggaatcaGGAAGTTACACATGTAGAAAGTAATGGAATAACAGGTGATACAGAATTTAAAGAACCAGAAATAAGTGAACAGACAAATGCCATCCAAAGTTTACCACAAGTGTGTTTATTATGTGAATCTCAATTTCCAAGTCCAGCTTTACTGGCAGCACATGTATTTGAGACACATGGAATTGATATGGCTCAAATTATTTCCTCGGAGCCTATTTTggaaaaaaaacgaaaaataccTAACTTAGTGAAAATCACTGACCTAAAGCAAAAAAATGAAAATCCTGATCCTGTTCCAGTAGTTGATATACCTGAAGAACCTCCGACATTGCAGGCCAATTACAATTGCCATTTTTGTCCAGCTCTTCTCACTAACAAAACGGATTTCTACACACATCTTCGCGTCAAGCATCCTAAACAGGCTTCTTTAATGTGTGGTGTGTGCGCTCAAGTATGTACATCATGTGTTTCTTTGTCTTCACATCTAGAATCATGCAGTAAACAACATTTAACGAGTGATCTAGCCAAGTATATATGTAAATTATGTCGATATAGTGATGATAATTCGAAAATAGTAGAAAATCATATCATAGTGCACGATTTTGTTCTACAGTATTGTACAAAACAGTCTAAAATCTACGATCCCAGTGATTACATCGAACACAATGCAAATTCTGAAAGTTTACCAAAGCTTTATTCATGTGCAGAGTGTACTGAAGGCGTGTTTGATGACTTTAAGGAATTCAGTGCACATCGCAGATCTCAGCATCAAATTTTTCATTGTGATCTCTGTAACAAGTCCTACGGTAGAAACTCTCACTTGTGGAAACACGTTAACAGACTGCATAAAGGACATCCGAGTATTACCTGCCAATTGTGTCATAAAACTAGTGCTTCGAAATATCACTTAGCGCAGCATTTCAGCAAAATACATAGTGCCAAGTTGTTTAATTCAAAACCGGACCCAACAAATGAGTATGAAGACTTTATGAAGCAAAAATTTCAAGGTTTCGATTTCCAATCGGTGAAGCAAAGCTTCATGCGACAGGAACTGTTGCAACAGGAACAGAAAGATTCATTTAGTGATGAGGCTTCGGACCAAGAAGAAGAAAACGAAAAAGGTGAAGACGAGAAAAATATAGAGAAAGGAAAGGAACCAAGTTTACCAAAAGAAATCGATTCCTCTTCAAATCTCTATACaaatattattacaaattatacTCCTCCGCAAAACAACGGCGAATTCAAATGTCCGAAATGTCTGAAAGGCTTCCATAAGAAGAACCTCCTGAAAAAGCACAAGAAAAATTGCAGACCTCGCTTACAAAAGGACCTCCTAACACGCTGTAAAACTTGCTCGAGGATATTTAAGGATAGACAGAGCTTAGCGAAACATCTGATCAATTACCATTCAGAATACGCCTGTGAAATTTGCGGTCAAAAGTTTCAGAGCAAGTGCGAGATCGTCTCCCACATTCGCTTCACCCATCCGAACTGTCACCTGTTTTGTTTCTGCGGAAACATCCTCAGAGACAGAGACGATCTCGTGCTTCACCAACAGGATCATCGAAATTCTTTTATATGCCAATTCTGTGCGGACAGTCTGCCGACGAAGATCAAACTTAAAATGCACATTTTAAGTTTGCACAGGAAAATTTTGAGCTTAAGTTGCGGCATTTGCCTGAAATTATTCGAGACTCAACATATATTGAGAGATCATGTTCGTCTCGTACATAAGGACCACTTGTTACCATTTACATCCTGTACAGTTTGCGGAAAGAATTACGGTTCAAAATGGAAAACATTCGATCACCTAAACAAATCCCATGGGCGTATATTTAAACCATGTAAAGTTTGTCTGGAAGTGTTCGATTTCGAGGAGCAACTCCAGAAACATTACGAAAGTATGCACACAAAATTTTCACAATCGAAAATGTCTAATCAAAACACACCGTCGATCGAATCCGGCAACATTAAGAAAGAGATGTGTGAAAGCGATTTTGAACATAACTACGAACACGAATATATTAAGCATAATAGCAATAGTGATGTGGACGATGCCGAAAATTATAATGTATACCAAAACGTAATTCACAGTGACGGCGAAGATAAAAATGTTCTGGCGAAAACGGACTTTCCGAACGTTCCTGACgaaaataaaatttcactcttggAAAAGCGACTTTTAGGCCAGAAAATTACGGATGACCAAAAGAAATcgacaaaaaaaaagaagagcGCAAAAACAGATGCAGCCAGATTATTATCGTGTAAAAGAGATGTAGATGAGAATGATTGCAATCCTCTACAAAACAGCTCGAAACGAACTGTGTACGTCAACAGCAATGATCCATCGCTGTGCGAGATTTGTTTGAAAACATGGCCTGCGAAGAAACATTTGTGGCAACACTACATACGATGCCATAAAACCGTCGCTGCCACTGTATGTGGTATTTGTTTGAAGGCTAATGAGAGTTATGAGACTTTACAAAAACATCTTAGAGAGAAACATCCAACTTTGCTACATGGGCAAGGATTCGGCTCGAATTTTATTTGTAGGATATGTGGACGGTAA
Protein Sequence: METKLCRICGKSTDNHLNIFKTEGLKIKLETCLPIIVSQHCLLPETICKECVENVENFYNFIKNCLQNLIILESQYDIHESCLKSKRKFEKGTAADTVTKTEKSIQTDEISFLRSYRESIDFPKTLEEAEETLNDNDYLRFLPKSEIKEIKLVNYDISDESNSETEDQTVSSIVVLTNNRQDKNSESLNLNNFLVHKQYFDNQENKLVNEITQRITQKRKCDEILPYQTKICKFDISSRRKNRQPKKISNKSIEDVPIFNKWNQEVTHVESNGITGDTEFKEPEISEQTNAIQSLPQVCLLCESQFPSPALLAAHVFETHGIDMAQIISSEPILEKKRKIPNLVKITDLKQKNENPDPVPVVDIPEEPPTLQANYNCHFCPALLTNKTDFYTHLRVKHPKQASLMCGVCAQVCTSCVSLSSHLESCSKQHLTSDLAKYICKLCRYSDDNSKIVENHIIVHDFVLQYCTKQSKIYDPSDYIEHNANSESLPKLYSCAECTEGVFDDFKEFSAHRRSQHQIFHCDLCNKSYGRNSHLWKHVNRLHKGHPSITCQLCHKTSASKYHLAQHFSKIHSAKLFNSKPDPTNEYEDFMKQKFQGFDFQSVKQSFMRQELLQQEQKDSFSDEASDQEEENEKGEDEKNIEKGKEPSLPKEIDSSSNLYTNIITNYTPPQNNGEFKCPKCLKGFHKKNLLKKHKKNCRPRLQKDLLTRCKTCSRIFKDRQSLAKHLINYHSEYACEICGQKFQSKCEIVSHIRFTHPNCHLFCFCGNILRDRDDLVLHQQDHRNSFICQFCADSLPTKIKLKMHILSLHRKILSLSCGICLKLFETQHILRDHVRLVHKDHLLPFTSCTVCGKNYGSKWKTFDHLNKSHGRIFKPCKVCLEVFDFEEQLQKHYESMHTKFSQSKMSNQNTPSIESGNIKKEMCESDFEHNYEHEYIKHNSNSDVDDAENYNVYQNVIHSDGEDKNVLAKTDFPNVPDENKISLLEKRLLGQKITDDQKKSTKKKKSAKTDAARLLSCKRDVDENDCNPLQNSSKRTVYVNSNDPSLCEICLKTWPAKKHLWQHYIRCHKTVAATVCGICLKANESYETLQKHLREKHPTLLHGQGFGSNFICRICGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00434473;
90% Identity: -
80% Identity: -