Asol068130.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- egg
- Assembly
- GCA_963170755.1
- Location
- OY720677.1:134459082-134473377[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3 1.2e+05 -4.0 0.1 35 42 9 16 4 20 0.78 2 2 6.5e-15 2.3e-10 43.1 0.1 5 75 46 109 43 111 0.90
Sequence Information
- Coding Sequence
- ATGATTGGTAAAACGCTAAAAAGATATTATACACCAAGACGACAAAAACCGAAAACCAACGTGTATGTGCCTCATTCCTGCAACCCCAAATGCAAAGATTTCATGTACTGTTCTTTATCAAGACTCAAGGGTTATAGTCCTCTTTCCAAACCTCTACTATGCGGATTTTATAGACTGATGTATAAAGTCAAGAATAAAAAGTATGTACTGTATAAAGCACCTTGCGGAAGAACCGTGCGAAATATGAAAGAAGTACATTACTACCTTCGAATTACAAAATCAGATCTAACTGTGGACTTGTTCGATTTTAATGTTTATGTACGCTGCTTGGCGGAATTTATGGTTGAACAGAAGAATATATTGGTAAAAGATTTATCACAAGgCAAAGAAGAATGTCCAATTACGGTCGTCAATTATGTCAATTCGGCTACGTTGCAGTTCTGCAATTATTCAACAATCCGAGATCCTATGCAAGGTGTCTCTCTTAATACCGATATTGAGTTCTTAACCGGCTGTGATTGCACAGATGATTGTATAGACAGACAGAAGTGTTCTTGCTGGCAATTAACACTACAATGTTTAAAATACATGGATAAGGATACCGATCCGGAATCTATAGGATATCAGTATAGAAGGTTACCAGACCCTATTTTCTCTGGCATATACGAGTGTAATAAAAGGTGTAAATGTGCATCGACTTGCCTAAATAGAGTTGTACAAAACCCACTTCATCATAAATTGCAGATATTCCAAACTGATATGAAAGGATGGGGTATTCGTTGTCTAAATGATATTCCGCAAGGATCCTTCATTTGTATATACGCCGGCGTACTATTAACAGAAGATATGGCAAACAGGgaAGGCAAACATTTCGGAGACGAATATTTAGCTGAATTAGATTTCATAGAAACGGCCGAAAGAACCAAGGAAGACTACGAGGAGGATCCATATCATGATGAAGTGGTAAAGGATACCAAGACACCTGAAGAGTCTGGAGATGACAGCGCTGCAGACGAAGATGAGGAAGACGACCTGATACGTAATACTGGAGAAGATAGGGACTTTATTCCCGCAAGTTTCCAGAAGCGACACTCGGATGATAGTCTTGCTAGTGGTGTCAGTACCAGATCGAGAAAACGCTTTCAAGAGGTCGTCGTTAAACAAGAGAGGCGATCTCAGCCGTTCAGAATAGTTGATGATGATACGGTCATGATTAGTGACGATGAGGATTATGAACCGAGGGAACCATCTAGCTTCAATGCGTTACCACGGCCTTCAACACAAACTGATGAAAACAAATATAAATCCGTTAGAGAAATATATGGTGAAGATGAGGACATATACATTATGGACGCGAAGAACACGGGGAATATAGGTAGATTTCTTAATCATTCCTGTTCACCCAATATATTTGTACAGAATGTCTTCGTTGATACGCACGATTTACGATTTCCATGGGTGGCTTTCTTTACTCTGAGTTACGTACGTGCCGGTACGGAACTAACTTGGAACTACAACTATGATATAGATAGCGTCCCCGGTAAAGAATTACCATGCTATTGTGGCTCGAGCGAATGCAAAGGTCGattattgtaa
- Protein Sequence
- MIGKTLKRYYTPRRQKPKTNVYVPHSCNPKCKDFMYCSLSRLKGYSPLSKPLLCGFYRLMYKVKNKKYVLYKAPCGRTVRNMKEVHYYLRITKSDLTVDLFDFNVYVRCLAEFMVEQKNILVKDLSQGKEECPITVVNYVNSATLQFCNYSTIRDPMQGVSLNTDIEFLTGCDCTDDCIDRQKCSCWQLTLQCLKYMDKDTDPESIGYQYRRLPDPIFSGIYECNKRCKCASTCLNRVVQNPLHHKLQIFQTDMKGWGIRCLNDIPQGSFICIYAGVLLTEDMANREGKHFGDEYLAELDFIETAERTKEDYEEDPYHDEVVKDTKTPEESGDDSAADEDEEDDLIRNTGEDRDFIPASFQKRHSDDSLASGVSTRSRKRFQEVVVKQERRSQPFRIVDDDTVMISDDEDYEPREPSSFNALPRPSTQTDENKYKSVREIYGEDEDIYIMDAKNTGNIGRFLNHSCSPNIFVQNVFVDTHDLRFPWVAFFTLSYVRAGTELTWNYNYDIDSVPGKELPCYCGSSECKGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -