Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: -
Assembly: GCA_963170755.1
Location: OY720675.1:110655661-110657805[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.4e-09 3.4e-07 33.0 0.0 2 39 17 55 16 60 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.4e-09	3.4e-07	33.0	0.0	2	39	17	55	16	60	0.93

Sequence Information

Coding Sequence: ATGGTGCGAACATACAAAAGAAAACGTCCTACTGAGCCAGAAATTCCTAGAGATATCTTGAAAAATGCGGTGAAGAATGTCATCAACAAGAGTATGTCTTTGAGAGCTGCTGCAATGAGATTCAATATACCTAAATCAACTTTATTTGACAGAGTTGTGAGAGCTAGAAAGCGTTCCAATAATAACATGGAAGACTCTGGAAATGAAGGTGGTGAATCAGAGGAAGAGCTCGCTTCCTCAAAATATGCAACACGGCAAGTGTTTTCACAAAAGGAAGAAATCGAGCTGGAGATATATCTCAAGAAGTGTTCAAAGATATGTTACGGCTTGACATATGATCTCTGTCGTGGATTGGCTTTCCAATATGCCTCAAAACTGAATAAGAAAATTCCGAGAAATTGGGAAATCAACAAAAAAGCAGAAATTGACTGGATGCAATGTTTTATGAAGCGCCATCCAAGGCTTTCTAATCGCAAACCGGAAAATACAAGTATAGCAAGAGCATCAGCTTTCAACAGAGCCAATGTGgaggaatttttcaataattataccTCAGTGCAAGCCAAATATAATTTCTCACCAGATCGTATATGGAACACTGATGAAACAGGTATAACCACAGTCCTTCAAGCGCCGAGAGTGATAGCAGAGAAAGGATCAAAAGCTGTAGGACAATGCGTATCTGCTGAACGAGGAGCTCTTGTCACGATGTGTGGAATAATATCTGCTGTTGGGGCTTCAATTCCACCCCTTTATATCTTTCCTCGTGTGAGGATGAAGGATCAGTTTTTATACGGTGCTGTTCCTGGGGCTATTGGGTATGCTGAGAAATCGGGATGGATGTCGACAAGGGTGTTTCTTAAACTGTTGGTGCATATAAGAAAACATACGAACAGTAGCTCCTCAAATAAAATTCTGCTGCTGATGGACAATCATGAGACACACGTTTCTATTGATGCCATCTTGTATGCAAGAGAACACGGAATTGTATTATTGTCGTTCCCGCCACATTGCACGCATGAAATGCAGCCACTGGATAAGGCAGTGTATGGTCCACTCAAATCCAAATGCAAGGTTTCTTTCAATGATTTCATTCTGTCGAACCCTGGTAAACCGATAACTATTTATGATGTTGCCAAGTTGTCAGCACAACCATATTTGCAAACATTCACTCCCTGTAACATTATAAGTAGTTTCAACAGTACTGGCTTATGGCCTATTAACTCCTTAGTTTATAAAGACGATGATTTCTGTGCCTCATTCGCGACGGACCGTCCTCTTGAAAATACAGATGGGGAGTCTTCCCAAAAGATAGTCGACACAAGTATCGTTGCTCAGCCTCACTCCCATGAAAACATTCCATGCTCCTCAAAAAATCATGAAGTAGAAGATATCGTAAgggaaatattgaatataatacTATATGAAGCTACCAAACCCAAAATTAATGTAATATCTGTTGTATCTGTTGTCAAACCATCAGATGTGAAACCCTTACCGAAGGCTTGTCCTAGAAACACTAACAGGAAATCAAGAAAGGGAAAATCGAGAATTTACACCAGTACTCCTGAGAAACAAAGAATCGAAGAGTTGGAGAAAGCCAAATTGATAAATGGGAAAAAAACAAACGTTTCGAAAAAATTGGTATCTGAATCTAAACCGAAGAaaatacaaagaagtaagcaacCACAGaggagaaagaagaagaaagcaCTTTCAGATTATATTTCATCATCAGATTCTGATATTGATTTACCTTTAATATCCACGAAAAAATTTAGAAACGATTTATCCGACTCTGATATGGATTTGGATTATGACAGTCATGCTGATGAGTTTCTTGAACTATTAGATGACGAGAAAATCATCAAAGATgattatttattagtgaagttcaCAACAAAAAAAAGATCCCTACACTATGTTGGAAAAGTGATAGATGTAACGGAAAATGGGGAATTCGaagttacatttttaaaaaagtgtaTAAAAGGATTTGTTTATCCAAAAGTTGAGGATATTTCATACATTGAGAGGAAAGACATTGTATCAAAATTACCTAAGCCCATGTCAACACCGGGGACTTCAAGAATGGCATCTTTTCTAAAGTTCAATGTAAATTTTTTTAGTTATGATGTTAATTAA
Protein Sequence: MVRTYKRKRPTEPEIPRDILKNAVKNVINKSMSLRAAAMRFNIPKSTLFDRVVRARKRSNNNMEDSGNEGGESEEELASSKYATRQVFSQKEEIELEIYLKKCSKICYGLTYDLCRGLAFQYASKLNKKIPRNWEINKKAEIDWMQCFMKRHPRLSNRKPENTSIARASAFNRANVEEFFNNYTSVQAKYNFSPDRIWNTDETGITTVLQAPRVIAEKGSKAVGQCVSAERGALVTMCGIISAVGASIPPLYIFPRVRMKDQFLYGAVPGAIGYAEKSGWMSTRVFLKLLVHIRKHTNSSSSNKILLLMDNHETHVSIDAILYAREHGIVLLSFPPHCTHEMQPLDKAVYGPLKSKCKVSFNDFILSNPGKPITIYDVAKLSAQPYLQTFTPCNIISSFNSTGLWPINSLVYKDDDFCASFATDRPLENTDGESSQKIVDTSIVAQPHSHENIPCSSKNHEVEDIVREILNIILYEATKPKINVISVVSVVKPSDVKPLPKACPRNTNRKSRKGKSRIYTSTPEKQRIEELEKAKLINGKKTNVSKKLVSESKPKKIQRSKQPQRRKKKKALSDYISSSDSDIDLPLISTKKFRNDLSDSDMDLDYDSHADEFLELLDDEKIIKDDYLLVKFTTKKRSLHYVGKVIDVTENGEFEVTFLKKCIKGFVYPKVEDISYIERKDIVSKLPKPMSTPGTSRMASFLKFNVNFFSYDVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00065988;
90% Identity: iTF_00066338; iTF_00066339; iTF_00066151; iTF_00066312; iTF_00066348; iTF_00066327; iTF_00066330; iTF_00066332; iTF_00066270; iTF_00066335; iTF_00065988; iTF_00066317; iTF_00066448; iTF_00066340; iTF_00066341; iTF_00067557; iTF_00066342; iTF_00066932; iTF_00066343; iTF_00066344; iTF_00066600; iTF_00066128; iTF_00066347; iTF_00066192; iTF_00066800; iTF_00066328; iTF_00065915; iTF_00066687;
80% Identity: -