Asol082380.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720678.1:117469582-117471726[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.1e-09 3.3e-07 33.1 0.0 2 39 17 55 16 60 0.93
Sequence Information
- Coding Sequence
- ATGGTGCGAACATACAAAAGAAAACGTCCTACTGAGCCAGAAATTCCTAGAGATATCTTGAAAAATGCGGTGAAGAATGTCATCAACAAGAGTATGTCTTTGAGAGCTGCTGCAATGAGATTCAATATACCTAAATCAACTTTATTTGACAGAGTTGTGAGAGCTAGAAAGCGTTCCAATAATAACATGGAAGACTCTGGAAATGAAGGTGGTGAATCAGAGGAAGAGCTCGCTTCCTCAAAATATGCAACACGGCAAGTGTTTTCACAAAAGGAAGAAATCGAGCTGGACATATATCTCAAGAAGTGTTCAAAGATATGTTACGGCTTGACATATGATCTCTGTCGTGGACTGGCTTTCCAATATGCCTCAAAACTGAATAAGAAAATTCCGAGAAATTGGGAAATCAACAAAAAAGCAGGAATTGACTGGATGCAATGTTTTATGAAGCGCCATCCAAGGCTTTCTAATCGCAAACCGGAAAATACAAGTATAGCAAGAGCATCAGCTTTCAACAGAGCCAATGTGgaggaatttttcaataattataccTCAGTGCAAGCCAAATATAATTTCTCACCAGATCGTATATGGAACACTGATGAAACAGGTATAACCAGAGTCCTTCAAGCACCGAGAGTGATAGCAGAGAAAGGATCAAAAGCTGTAGGACAATGCGTATCTGCTGAACGAGGAGCTCTTGTCACGATGTGTGGAATAATATCTGCTGTTGGGGCTTCAATTCCACCCCTTTATATCTTTCCTCGTGTGAGGATGAAGGATCAGTTTTTATACGGTGCTGTTCCTGGGGCTATTGGGTATGTTGAGAAATCGGGATGGATGTCGACAAGGGTGTTTCTTAAACTGTTGGTGCATATAAGAAAACATACGAACAGTAGCTCCTCAAATAAAATTCTGCTGCTGATGGACAATCATGAGACACACGTTTCTATTGATGCCATCTTGTATGCAAGAGAACACGAAATTGTATTATTGTCGTTCCCGCCACATTGCACGCATAAAATGCAGCCACTGGATAAGGCAGTGTATGGTCCACTCAAATCCAAATGCAAGGTTTCTTTCAATGATTTCATTCTGTCGAACCCTGGTAAACCGATAACTATTTATGATGTTGCCAAGTTGTCAGCACAACCATATTTGCAAACATTCACTCCCTGTAACATTATAAGTAGTTTCAACAGTACTGGCTTATGGCCTATTAACTCCTTAGTTTATAAAGACGATGATTTCTGTGCCTCATTCGCGACGAACCGTCCTCTTGAAAATACAGATGGGGAGTCTTCCCAAAAGATAGTCGACACAAGTATCGTTGCTCAGCCTCACTCCCATGAAAACATTCCATGCTCCTCAAAAAATCATGAAGTAGAAGATATCGTAAgggaaatattgaatataatacTATATGAAGCTACCAAACCCAAAATTAATGTAATATCTGTTGTATCTGTTGTCAAACCATCAGATGTGAAACCCTTACCGAAGGCTTGTCCTAGAAACACTAACAGGAAATCAAGAAAGGGAAAATCGAGAATTTACACCAGTACTCCTGAGAAACAAAGAATCGAAGAGTTGGAGAAAGCCAAATTGATGAATGGGAAAAAAACAAACGTTTCGAAAAAATTGGTATCTGAATCTAAACCGAAGAaaatacaaagaagtaagcaacCACAGaggagaaagaagaagaaagcaCTTTCAGATTATATTTCATCATCAGATTCTGATATTGATTTACCTTTAATATCCACGAAAAAATTTAGAAACGATTTATCCGACTCTGATATAGATTTGTATTATGACAtgaagttcaCAACAAAAAAAAGATCCCTACACTATGTTGGAAAAGTGATAGATGTAACGGAAAATGGGGAATTCGaagttacatttttgaaaaagtgtATAAAAGGATTTGTTTATCCAAAAGTTGAGGATATTTCATACATTGAGAGGAAAGACATTGTATCAAAATTACCTCAGCCCATGTCAACACCGGGGACTTCAAGAATGGCATCTTTTCTAAAGTTCAATGTAAATTTTTTTACTTATGATGTTAATTAA
- Protein Sequence
- MVRTYKRKRPTEPEIPRDILKNAVKNVINKSMSLRAAAMRFNIPKSTLFDRVVRARKRSNNNMEDSGNEGGESEEELASSKYATRQVFSQKEEIELDIYLKKCSKICYGLTYDLCRGLAFQYASKLNKKIPRNWEINKKAGIDWMQCFMKRHPRLSNRKPENTSIARASAFNRANVEEFFNNYTSVQAKYNFSPDRIWNTDETGITRVLQAPRVIAEKGSKAVGQCVSAERGALVTMCGIISAVGASIPPLYIFPRVRMKDQFLYGAVPGAIGYVEKSGWMSTRVFLKLLVHIRKHTNSSSSNKILLLMDNHETHVSIDAILYAREHEIVLLSFPPHCTHKMQPLDKAVYGPLKSKCKVSFNDFILSNPGKPITIYDVAKLSAQPYLQTFTPCNIISSFNSTGLWPINSLVYKDDDFCASFATNRPLENTDGESSQKIVDTSIVAQPHSHENIPCSSKNHEVEDIVREILNIILYEATKPKINVISVVSVVKPSDVKPLPKACPRNTNRKSRKGKSRIYTSTPEKQRIEELEKAKLMNGKKTNVSKKLVSESKPKKIQRSKQPQRRKKKKALSDYISSSDSDIDLPLISTKKFRNDLSDSDIDLYYDMKFTTKKRSLHYVGKVIDVTENGEFEVTFLKKCIKGFVYPKVEDISYIERKDIVSKLPQPMSTPGTSRMASFLKFNVNFFTYDVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00066306; iTF_00066338; iTF_00066340; iTF_00066341; iTF_00066800; iTF_00066151; iTF_00066343; iTF_00066312; iTF_00066344; iTF_00066600; iTF_00066348; iTF_00066317; iTF_00066128; iTF_00066347; iTF_00066192; iTF_00066932; iTF_00066339; iTF_00067557; iTF_00066342; iTF_00066319; iTF_00066448; iTF_00066328; iTF_00066336; iTF_00020150; iTF_00066327; iTF_00066330; iTF_00065915; iTF_00066332; iTF_00066270; iTF_00066335; iTF_00066687;
- 90% Identity
- iTF_00066336;
- 80% Identity
- -