Asol134660.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720682.1:104980100-104981758[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8e-12 4.3e-10 42.3 0.0 3 40 20 57 18 62 0.94
Sequence Information
- Coding Sequence
- ATGCCAAGAAATTTTAGACGTAAATTTGGTGCGCCTTTGAGAAGAGACTATTCTCTGGACCAACTAGAACTAGCACTGGAAGGTGTTATAAATGGCAGATATTCTTTTTCACAAGCAGCTGAGAGATTTGGTGTACCAAAGACTACAATATATAGAAGATATAGAGGCCAGAAGTCTGAAAAACTTGGTCGTCCGACTGCTCTAACTAGTATTGAGGAGAAACAAATTGTAAGCTGTCTGACAACAGCTGCGCAGTTTGGAATTCCGTTTACAGACAGAGGCTTGAGAGAATTCGTTCAGCAATATTTAAATCGGAAAGGGGTCGCAAGtccaatttttgttaacaatcttCCGGGACCAGATTGGTTACAATCttttatgaaaagaaataagTCACTATCTATAAGACTGTCAGAAAACATGAAGAGAAGTAAAGCAGAATTAAGTGAAGATGTTTTAAGGACTTATTTTGAGGAGCTAGGAAGATCTCTTAATGGGGTTCCACCTGACAACATCATAAACTATGATGAAACTAACTTCATCGATGATCCTGGAAAGCAACGTGTAATTATCAAAAGGATAAGTAAACATGCAAGTCGCATCATGGACACCTCAAAAAATGCTACTTCTGTCATGTTTGCAGCGTCAGGTAGTGGACAGTTATTACCTCCGTATGTGGTTTTTAAATCTAAATGTTTATATCGAGAGTGGGTAGAGAAAGGTCCTGTAGGTGCTGCATTTAACAGGACAGACAGTGGATGGTTTGACAGCAACACATTTGAGGACTGGTTTTTACAAATTGCTTTACCTTATCTGAAAAGAAAGGTAGGAAAAAAAGTTCTTATTGGTGACAACTTGGCTTCCCACCTATCTGAATCTGTTATAAGAAAGTGCACTGAGAACAATATCAACTTTATTTTATTACCACCAAACAGCACCCACTTGTGTCAGCCATTGGACGTCTGTGTTTTTCGCCCCATGAAAATTACATGGCGAAAAGTTCTTCTAAAATGGAAGATGAAACATAAAGGAACAGTTCCGAAATGTGAATTTTCAAATCTACTTCGAGAAACTTTAGATTCTATGCAACCCAACTTGGAGGCAAATATTAAGTCCGGATTTGAGGCCTGTGGCATTATTCCTTTAAATGCTGAAAGGGTCATAAATAAAATCCTCTCCAGAAGTAGGGATAGAAATGGGGCCAATGATGAGTTGATAGCGTCATTTACTAATATTGTTGAGCAAGCTAcaaggaaagaaaaaccaaatgtgggaagaaagaaaaaaattaatgttgtaCCTGGGCGGTCAGTAACGGAAAATGATTTTCTTCAACTGGAAAACTCGAGTGTAAACGATGTTCAGCCTGTATCTGAAAGTTTCGATGGAAACCAAAGCAATGAAGACTCTGACATAGAAGTCAGCAGTAGTGCCTTAGAATTAAAAGTGCCTGCCAAAAATTGTGATCTTACTGTTAATAGgtttataattgttaatttcatatatgatAAAAATACCAAAAAAGAGAAATCTAAGCAATTTGTTGCGAAGTtgttagaaataaataagaaaagttATTCAGTACAATGTATGAGGAGctataagggaaaaaataattgttttgtttttccaGTTGTGAATGATATTAACACTTACTAG
- Protein Sequence
- MPRNFRRKFGAPLRRDYSLDQLELALEGVINGRYSFSQAAERFGVPKTTIYRRYRGQKSEKLGRPTALTSIEEKQIVSCLTTAAQFGIPFTDRGLREFVQQYLNRKGVASPIFVNNLPGPDWLQSFMKRNKSLSIRLSENMKRSKAELSEDVLRTYFEELGRSLNGVPPDNIINYDETNFIDDPGKQRVIIKRISKHASRIMDTSKNATSVMFAASGSGQLLPPYVVFKSKCLYREWVEKGPVGAAFNRTDSGWFDSNTFEDWFLQIALPYLKRKVGKKVLIGDNLASHLSESVIRKCTENNINFILLPPNSTHLCQPLDVCVFRPMKITWRKVLLKWKMKHKGTVPKCEFSNLLRETLDSMQPNLEANIKSGFEACGIIPLNAERVINKILSRSRDRNGANDELIASFTNIVEQATRKEKPNVGRKKKINVVPGRSVTENDFLQLENSSVNDVQPVSESFDGNQSNEDSDIEVSSSALELKVPAKNCDLTVNRFIIVNFIYDKNTKKEKSKQFVAKLLEINKKSYSVQCMRSYKGKNNCFVFPVVNDINTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065088;
- 90% Identity
- iTF_00065172;
- 80% Identity
- -